EWM20684.1, cds9989 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|585100505|gb|EWM20684.1| (Protein of unknown function DUF1764, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 345.125 bits (884), Expect = 2.738e-120 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
Query: 1 MNLGTGGEADMGRARTNTAFRPPRPQSKIKKDSRTCNERSHTNRETADVEDKFAGKEEKNLLTDAVRQAGKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCFG 167
MNLGTGGEADMGRARTNTAFRPPRPQSKIKKDSRTCNERSHTNRETADVEDKFAGKEEKNLLTDAVRQAGKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCFG
Sbjct: 1 MNLGTGGEADMGRARTNTAFRPPRPQSKIKKDSRTCNERSHTNRETADVEDKFAGKEEKNLLTDAVRQAGKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCFG 167
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|585100506|gb|EWM20685.1| (Protein of unknown function DUF1764, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 264.233 bits (674), Expect = 8.787e-89 Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0
Query: 1 MNLGTGGEADMGRARTNTAFRPPRPQSKIKKDSRTCNERSHTNRETADVEDKFAGKEEKNLLTDAVRQAGKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRPWK 133
MNLGTGGEADMGRARTNTAFRPPRPQSKIKKDSRTCNERSHTNRETADVEDKFAGKEEKNLLTDAVRQAGKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRP K
Sbjct: 1 MNLGTGGEADMGRARTNTAFRPPRPQSKIKKDSRTCNERSHTNRETADVEDKFAGKEEKNLLTDAVRQAGKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRPCK 133
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|698795684|ref|XP_009830871.1| (hypothetical protein H257_07134 [Aphanomyces astaci] >gi|574114447|gb|ETV79935.1| hypothetical protein H257_07134 [Aphanomyces astaci]) HSP 1 Score: 65.855 bits (159), Expect = 2.005e-10 Identity = 46/164 (28.05%), Postives = 75/164 (45.73%), Query Frame = 0
Query: 3 LGTGGEADMGRARTNTAFRPPRPQSKIKKDSRTCNERSHTNRETADVEDKFAGKEEKNLLTDAVRQAGKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCF 166
+ G ++ +A + F + +K+ KD+ ++ TA V AGK++K + A ++D LF+ + +K+ + + A+ R + E D D RP + DA G+PIY ES+R+ +GG TA CPFDC CCF
Sbjct: 19 MAVGAKSTSAKASLDALFATKKTAAKVPKDAGASKLKT-----TAVV----AGKQDK-------QTAKHQLDALFSGIKAKKQQKIDEDNAVRRQEDKELAEKRAYRKHLEALEAEHKQKNNDSSDPRPVRYDADGLPIYSEESLRLNQGGETADCPFDCWCCF 166
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|873231610|emb|CEM07797.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 63.929 bits (154), Expect = 1.019e-9 Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 0
Query: 70 GKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRR-YDPQRDDPDV----RPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCF 166
G++ID LF+ L ++ + S T++A ++ + GRR P D D+ RP + G PIY E +R+G+GGGT LCPFDC+CCF
Sbjct: 72 GRQIDALFSRLKRKHK----SEPTQQAKTATTSGGNKVRGDSSVARRGRRPKQPSSIDEDLSLANRPRRYTEEGWPIYTEEELRIGQGGGTPLCPFDCDCCF 169
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|299470800|emb|CBN79846.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 61.6178 bits (148), Expect = 8.381e-9 Identity = 24/39 (61.54%), Postives = 32/39 (82.05%), Query Frame = 0
Query: 128 DVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCF 166
+V+P + D G+PIY ES+R+G+GGGTA CPFDC+CCF
Sbjct: 144 EVKPVRFDDEGLPIYTWESLRIGQGGGTAACPFDCDCCF 182
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|953486308|emb|CEG49639.1| (Protein of unknown function DUF1764, eukaryotic [Plasmopara halstedii]) HSP 1 Score: 62.003 bits (149), Expect = 8.846e-9 Identity = 35/101 (34.65%), Postives = 51/101 (50.50%), Query Frame = 0
Query: 72 EIDGLFNDLTQRKRVAAASATTKKAVVKIK----KADSRPPSHTVGKNEGRRYDPQR--DDPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCF 166
EID LF L +KR + +K ++K K + + K E + + +PD RP + D G+PIY ++++GKGG T CPFDC CCF
Sbjct: 99 EIDDLFAILKTKKRKKNIAEENQKLAKEVKERCEKKERERLQQQIKKLEAQNTNSTACGLNPDPRPVRYDEDGLPIYTEAALQIGKGGNTQDCPFDCWCCF 199
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|301090157|ref|XP_002895307.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262100734|gb|EEY58786.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 59.6918 bits (143), Expect = 1.309e-8 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
Query: 126 DPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCF 166
+PD RP + D G+PIY S+++GKGG T CPFDC CCF
Sbjct: 80 NPDPRPVRYDEDGLPIYSEASLQIGKGGNTKDCPFDCWCCF 120
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|813227181|ref|XP_012212667.1| (hypothetical protein SPRG_17870, partial [Saprolegnia parasitica CBS 223.65] >gi|641520482|gb|KDO16626.1| hypothetical protein SPRG_17870, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 60.8474 bits (146), Expect = 1.368e-8 Identity = 34/98 (34.69%), Postives = 53/98 (54.08%), Query Frame = 0
Query: 69 AGKEIDGLFNDLTQRKRVAAASATTKKAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCF 166
A E+D LF+ L +K+ A A + ++ + ++A+ + K E D + +P + DA G+PIY S+R+ +GG TA CPFDC CCF
Sbjct: 60 AKLELDALFSGLKAKKKKAQADSAAEQKRLDEERAEKLAYRKKLEKIENEYKTKHSDSSNPQPVRYDADGLPIYTAASLRINQGGDTADCPFDCWCCF 157
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|301088727|ref|XP_002894779.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262108814|gb|EEY66866.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 59.6918 bits (143), Expect = 1.438e-8 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
Query: 126 DPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCF 166
+PD RP + D G+PIY S+++GKGG T CPFDC CCF
Sbjct: 79 NPDPRPVRYDEDGLPIYSEASLQIGKGGNTKDCPFDCWCCF 119
BLAST of EWM20684.1 vs. NCBI_GenBank
Match: gi|697888362|ref|XP_009689424.1| (uncharacterized protein TOT_010001188 [Theileria orientalis strain Shintoku] >gi|403220990|dbj|BAM39123.1| uncharacterized protein TOT_010001188 [Theileria orientalis strain Shintoku]) HSP 1 Score: 59.6918 bits (143), Expect = 1.683e-8 Identity = 38/97 (39.18%), Postives = 47/97 (48.45%), Query Frame = 0
Query: 73 IDGLFNDLTQRKRVAAASATTK---KAVVKIKKADSRPPSHTVGKNEGRRYDPQRDDPDVRPWKRDATGMPIYDPESMRVGKGGGTALCPFDCNCCF 166
I+ +F L + A+TK K++VK K R GK E Y D R D +PIY E + +GKGGGT LCPFDCNCCF
Sbjct: 32 INDIFKTLKTTSHTNTSKASTKPSTKSIVKEKSKGKR------GKTE--EYCTVNGDSARRRTTVD--NLPIYTMEELNIGKGGGTELCPFDCNCCF 118 The following BLAST results are available for this feature:
BLAST of EWM20684.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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