EWM20711.1, cds9963 (CDS) Nannochloropsis gaditana

Overview
NameEWM20711.1
Unique Namecds9963
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:78981..79451 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20711.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100789g1.8989.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:78981..79451 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Homology
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BLAST of EWM20711.1 vs. NCBI_GenBank
Match: gi|585100550|gb|EWM20711.1| (hypothetical protein Naga_100789g1 [Nannochloropsis gaditana])

HSP 1 Score: 322.398 bits (825), Expect = 1.134e-111
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MKKTIRSITFPIHRPPSTLNAGASTRKSSNDSSDGSGSISPVPQHSHHPSTLKRARPQQHYEKGQRLTANEAMASLPPFQDSVTSQPTRSQQGEKNTSPLPPRAPSLTIHVQECLDEAFGLYVWPSSVKLASYLYHLFERYPDFFRGKRVIELGAG 156
            MKKTIRSITFPIHRPPSTLNAGASTRKSSNDSSDGSGSISPVPQHSHHPSTLKRARPQQHYEKGQRLTANEAMASLPPFQDSVTSQPTRSQQGEKNTSPLPPRAPSLTIHVQECLDEAFGLYVWPSSVKLASYLYHLFERYPDFFRGKRVIELGAG
Sbjct:    1 MKKTIRSITFPIHRPPSTLNAGASTRKSSNDSSDGSGSISPVPQHSHHPSTLKRARPQQHYEKGQRLTANEAMASLPPFQDSVTSQPTRSQQGEKNTSPLPPRAPSLTIHVQECLDEAFGLYVWPSSVKLASYLYHLFERYPDFFRGKRVIELGAG 156
The following BLAST results are available for this feature:
BLAST of EWM20711.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100550|gb|EWM20711.1|1.134e-111100.00hypothetical protein Naga_100789g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9994rna9994Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications