EWM20714.1, cds9959 (CDS) Nannochloropsis gaditana

Overview
NameEWM20714.1
Unique Namecds9959
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:67648..67788 -
Alignment locationKK037259.1:67372..67439 -
Alignment locationKK037259.1:67037..67065 -
Alignment locationKK037259.1:66901..66989 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20714.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102008g1.2275.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:67648..67788 -
KK037259.1supercontigKK037259.1:67372..67439 -
KK037259.1supercontigKK037259.1:67037..67065 -
KK037259.1supercontigKK037259.1:66901..66989 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20714.1 vs. NCBI_GenBank
Match: gi|585100558|gb|EWM20714.1| (hypothetical protein Naga_102008g1 [Nannochloropsis gaditana])

HSP 1 Score: 222.631 bits (566), Expect = 1.054e-73
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 
Query:    1 MQQEARRLQRHLPDASIVRLEGSGHISLDARVNMTDILMRHPKLFAQPKAQREKDYVRDFVKPSPQYIERYMNIVEQYLGTPSNPSPSRPPCFLPSLLSTLCLQFPSP 108
            MQQEARRLQRHLPDASIVRLEGSGHISLDARVNMTDILMRHPKLFAQPKAQREKDYVRDFVKPSPQYIERYMNIVEQYLGTPSNPSPSRPPCFLPSLLSTLCLQFPSP
Sbjct:    1 MQQEARRLQRHLPDASIVRLEGSGHISLDARVNMTDILMRHPKLFAQPKAQREKDYVRDFVKPSPQYIERYMNIVEQYLGTPSNPSPSRPPCFLPSLLSTLCLQFPSP 108
The following BLAST results are available for this feature:
BLAST of EWM20714.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100558|gb|EWM20714.1|1.054e-73100.00hypothetical protein Naga_102008g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9990rna9990Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications