EWM20715.1, cds9957 (CDS) Nannochloropsis gaditana

Overview
NameEWM20715.1
Unique Namecds9957
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:64501..64610 -
Alignment locationKK037259.1:64254..64371 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20715.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100385g4.2317.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:64501..64610 -
KK037259.1supercontigKK037259.1:64254..64371 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM20715.1 vs. NCBI_GenBank
Match: gi|585100561|gb|EWM20715.1| (hypothetical protein Naga_100385g4 [Nannochloropsis gaditana])

HSP 1 Score: 152.91 bits (385), Expect = 3.856e-47
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MRSILSRLCQVVDAKESWIYREFARPCKICPEGFLLKHPWLQNRSMTRRSRQKLTLILWQNLLSCNLLMLYVISL 75
            MRSILSRLCQVVDAKESWIYREFARPCKICPEGFLLKHPWLQNRSMTRRSRQKLTLILWQNLLSCNLLMLYVISL
Sbjct:    1 MRSILSRLCQVVDAKESWIYREFARPCKICPEGFLLKHPWLQNRSMTRRSRQKLTLILWQNLLSCNLLMLYVISL 75
The following BLAST results are available for this feature:
BLAST of EWM20715.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100561|gb|EWM20715.1|3.856e-47100.00hypothetical protein Naga_100385g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9988rna9988Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications