EWM29681.1, cds994 (CDS) Nannochloropsis gaditana

Overview
NameEWM29681.1
Unique Namecds994
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:922184..922528 +
Alignment locationCM002456.1:922593..922757 +

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Properties
Property NameValue
Protein idEWM29681.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100299g4.1143.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:922184..922528 +
CM002456.1supercontigCM002456.1:922593..922757 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM29681.1 vs. NCBI_GenBank
Match: gi|585112256|gb|EWM29681.1| (hypothetical protein Naga_100299g4 [Nannochloropsis gaditana])

HSP 1 Score: 350.132 bits (897), Expect = 3.005e-122
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 
Query:    1 MKVRRGAKKIRLQGKRQNHSKFSKPKTGMHSVVQTVWEGKDSVRKNLQKLGVSDDPNRTTAFCASPTGSSGIDPQDVFSLPPAERRDRNPRRRPMSAEDQAYIVKLLMVHGNDYKRCVCVSKYRVFLFFALVLVRLIVAVGPSDRASLLAESCCCNLIFTALKFVKLHG 169
            MKVRRGAKKIRLQGKRQNHSKFSKPKTGMHSVVQTVWEGKDSVRKNLQKLGVSDDPNRTTAFCASPTGSSGIDPQDVFSLPPAERRDRNPRRRPMSAEDQAYIVKLLMVHGNDYKRCVCVSKYRVFLFFALVLVRLIVAVGPSDRASLLAESCCCNLIFTALKFVKLHG
Sbjct:    1 MKVRRGAKKIRLQGKRQNHSKFSKPKTGMHSVVQTVWEGKDSVRKNLQKLGVSDDPNRTTAFCASPTGSSGIDPQDVFSLPPAERRDRNPRRRPMSAEDQAYIVKLLMVHGNDYKRCVCVSKYRVFLFFALVLVRLIVAVGPSDRASLLAESCCCNLIFTALKFVKLHG 169
The following BLAST results are available for this feature:
BLAST of EWM29681.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112256|gb|EWM29681.1|3.005e-122100.00hypothetical protein Naga_100299g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna995rna995Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications