EWM20748.1, cds9925 (CDS) Nannochloropsis gaditana

Overview
NameEWM20748.1
Unique Namecds9925
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037258.1:96681..96734 +
Alignment locationKK037258.1:96926..97141 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20748.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103321g1.10546.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:96681..96734 +
KK037258.1supercontigKK037258.1:96926..97141 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20748.1 vs. NCBI_GenBank
Match: gi|585100612|gb|EWM20748.1| (hypothetical protein Naga_103321g1 [Nannochloropsis gaditana])

HSP 1 Score: 187.193 bits (474), Expect = 2.964e-60
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 
Query:    1 MDADTSVYEAENTVVYQRLPDRGRQGHSQRRLPQDYLGRSAGAARRPIECVSKHPSCTFLRCAEGRQQHQFRPSVDLPPAFWGGTVGAW 89
            MDADTSVYEAENTVVYQRLPDRGRQGHSQRRLPQDYLGRSAGAARRPIECVSKHPSCTFLRCAEGRQQHQFRPSVDLPPAFWGGTVGAW
Sbjct:    1 MDADTSVYEAENTVVYQRLPDRGRQGHSQRRLPQDYLGRSAGAARRPIECVSKHPSCTFLRCAEGRQQHQFRPSVDLPPAFWGGTVGAW 89
The following BLAST results are available for this feature:
BLAST of EWM20748.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100612|gb|EWM20748.1|2.964e-60100.00hypothetical protein Naga_103321g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9956rna9956Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications