EWM30570.1, cds99 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|585113237|gb|EWM30570.1| (protein of unknown function DUF4033 [Nannochloropsis gaditana] >gi|585113238|gb|EWM30571.1| protein of unknown function DUF4033 [Nannochloropsis gaditana]) HSP 1 Score: 725.317 bits (1871), Expect = 0.000e+0 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
Query: 1 MERAVRVRGRDFPSSSLCVVSATQRASASSTSHNGGREVIKIEIPAAWSKPRSTYRRRHLRLIATHFFVLIVLCVIIGRACAFAPLHTRRIALPTSPFASRPPPNFRRFLFGFGGKDSQTNKNSGNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKECSTAVTSKRVCPVVTSAADRK 357
MERAVRVRGRDFPSSSLCVVSATQRASASSTSHNGGREVIKIEIPAAWSKPRSTYRRRHLRLIATHFFVLIVLCVIIGRACAFAPLHTRRIALPTSPFASRPPPNFRRFLFGFGGKDSQTNKNSGNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKECSTAVTSKRVCPVVTSAADRK
Sbjct: 1 MERAVRVRGRDFPSSSLCVVSATQRASASSTSHNGGREVIKIEIPAAWSKPRSTYRRRHLRLIATHFFVLIVLCVIIGRACAFAPLHTRRIALPTSPFASRPPPNFRRFLFGFGGKDSQTNKNSGNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKECSTAVTSKRVCPVVTSAADRK 357
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|553181359|ref|XP_005853551.1| (hypothetical protein NGA_0357502 [Nannochloropsis gaditana CCMP526] >gi|422295511|gb|EKU22810.1| hypothetical protein NGA_0357502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 589.341 bits (1518), Expect = 0.000e+0 Identity = 296/313 (94.57%), Postives = 296/313 (94.57%), Query Frame = 0
Query: 1 MERAVRVRGRDFPSSSLCVVSATQRASASSTSHNGGREVIKIEIPAAWSKPRSTYRRRHLRLIATHFFVLIVLCVIIGRACAFAPLHTRRIALPTSPFASRPPPNFRRFLFGFGGKDSQTNKNSGNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCT 313
MERAVRVRGRDFPSSSLCVVSATQRASASSTSHNGGREVIKIEIPAAWSKPRSTYRRRHLRLIATHFFVLIVLCVIIGRACAFAPLHTRRIALPTSPFASRPPPNFRRFLFGFGGKDSQTNKNSGNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVT YLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLS T
Sbjct: 1 MERAVRVRGRDFPSSSLCVVSATQRASASSTSHNGGREVIKIEIPAAWSKPRSTYRRRHLRLIATHFFVLIVLCVIIGRACAFAPLHTRRIALPTSPFASRPPPNFRRFLFGFGGKDSQTNKNSGNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVT----------------YLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSRT 297
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|778674788|ref|XP_011650294.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis sativus] >gi|700200533|gb|KGN55666.1| hypothetical protein Csa_3G002850 [Cucumis sativus]) HSP 1 Score: 171.785 bits (434), Expect = 6.769e-48 Identity = 95/235 (40.43%), Postives = 136/235 (57.87%), Query Frame = 0
Query: 125 GNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRN---------FIPYEEYVRLSRLLLRGGSTKAKSAVL-SVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKE-CSTAVTSKRVCP 348
+S +P P + KYND F K+++ LF K+ A R YE +V +S+ +++G + + V+ VL S+ PG + FR LFP ++ ACEFNA +T FF WLVGP++V E V G ++ + V I++CRYLE+ C G CV++CK+PTQ FFT + G+P+TM PNFED+SC M +G P P DPV + CYK+ CS A+TS +CP
Sbjct: 34 AEASGEPAPLG--QKTKYNDGPFEKVFMTLFARKMEKFANAKEQRKKKEGLWWDFLYDYERFVDVSKRVMQGKTRMQQQIVVREVLLSMLPPGAPAQFRKLFP-PTKWACEFNALITVPFFQWLVGPSEVVEVE----VNGIKQ--RSGVHIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNFEDMSCEMIYGQVPPPFEEDPVSKQPCYKDICSMAITSAPLCP 259
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|168000160|ref|XP_001752784.1| (predicted protein [Physcomitrella patens] >gi|162695947|gb|EDQ82288.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 172.17 bits (435), Expect = 7.132e-48 Identity = 97/231 (41.99%), Postives = 138/231 (59.74%), Query Frame = 0
Query: 128 SLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVL-SVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCY-KECSTAVTSKRVCPVVTSAADR 356
S KP PF ++ +YND+I K +I LF K+ A +G S YE +V +S+ +++G + + AV+ VL S+ PG + FR LFP ++ + EFNA VT FF WLVGPA++ E V G +++ + VKI +CRYLE+ C G CV++CK+PTQ FFT + G+P+TMTPNFED+SC M +G +P PI DP + C+ CS A CP + A
Sbjct: 44 SGKPAPFG--QITRYNDNILDKAFIALFRRKMEANLGKTS--KMQGYEGFVDVSKKIMQGRTAVEQRAVVRDVLLSLLPPGAPAQFRKLFP-PTKWSAEFNAAVTVPFFQWLVGPAELMEIE----VNGVKQM--SGVKITKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDMSCEMFYGQSPPPIEEDPALKQPCFLNMCSIAPPQSTACPKLQQVAQE 263
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|545366773|ref|XP_005648267.1| (hypothetical protein COCSUDRAFT_33175 [Coccomyxa subellipsoidea C-169] >gi|384250243|gb|EIE23723.1| hypothetical protein COCSUDRAFT_33175 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 169.088 bits (427), Expect = 6.284e-47 Identity = 93/231 (40.26%), Postives = 133/231 (57.58%), Query Frame = 0
Query: 130 KPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIP-YEEYVRLSRLLLRG-GSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCY-KECSTAVTSKRVCPVVTSAADRK 357
K PFA + YND K + F G+++ +G R ++P YE +V LSR +++G S + + AV VL S+ P S FR FP S+ + E NA +T + F WLVGP +ET E+ G ++ W + V+I++CRYLE C G CV++CK+PT+ FFT G+P+TM PNFEDLSC M FG PI DP+ ++ C+ EC+ A CP + + RK
Sbjct: 17 KVDPFAQKET--YNDSPLDKFMVSYFAGRMSQQLGG---REYVPGYEGFVELSREMMKGRNSKQQQQAVSGVLGSLMPPQASERFRKWFP-VSKWSAETNALITVLGFKWLVGP--LETKEVEVEFEGEKQKWKSGVQIKKCRYLEQSGCIGMCVNMCKIPTEDFFTNQFGLPLTMNPNFEDLSCEMIFGQKAPPIEQDPLYNQPCFAHECTLAEKEPVPCPKIDTDRHRK 239
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|659095394|ref|XP_008448557.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis melo]) HSP 1 Score: 169.474 bits (428), Expect = 6.729e-47 Identity = 94/234 (40.17%), Postives = 135/234 (57.69%), Query Frame = 0
Query: 125 GNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRN--------FIPYEEYVRLSRLLLRGGSTKAKSAVL-SVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKE-CSTAVTSKRVCP 348
+S +P P + KYND F K+++ LF K+ A R YE +V +S+ +++G + + V+ VL S+ PG + FR LFP ++ ACEFNA +T FF WLVGP++V E V G ++ + V I++CRYLE+ C G CV++CK+PTQ FFT + G+P+TM PNFED+SC M +G P P DPV + CYK+ CS + TS +CP
Sbjct: 35 AEASGEPAPLG--QKTKYNDGPFEKVFMTLFARKMEKFANAKEQRKKKEGFWDFLYDYERFVDVSKRVMQGKNRMQQQLVVREVLLSMLPPGAPAQFRKLFP-PTKWACEFNASITVPFFQWLVGPSEVVEVE----VNGIKQ--RSGVHIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNFEDMSCEMIYGQVPPPFEEDPVSKQPCYKDICSMSNTSAPLCP 259
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|385763996|gb|AFI78801.1| (putative D27 family protein, partial [Spirogyra pratensis]) HSP 1 Score: 164.466 bits (415), Expect = 2.812e-45 Identity = 90/221 (40.72%), Postives = 130/221 (58.82%), Query Frame = 0
Query: 130 KPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAK-SAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKE-CSTAVTSKRVCP 348
KP P + KYND IF + ++ LF K+A V G S + YE +V SR +++G + + + AV VL S+ P + FR +FP ++ + E NA +T FF WLVGPA+++ E V G +++ + V+I++CRYLE C G CV++CKLPTQ FFT + G+P+TM PNFED+SC M FG P+ DP + CY C+ A + CP
Sbjct: 20 KPAPMG--QKTKYNDSIFDRAFMALFAAKMATVTGKRS--DIGGYEGFVDTSRKVMQGRNAQGQREAVAKVLLSLLPPNAPAQFRKIFP-PTKWSAEMNAAITVPFFQWLVGPAELKEVE----VNGVKQM--SGVQIKKCRYLEYSGCVGMCVNMCKLPTQDFFTNEFGLPLTMNPNFEDMSCEMIFGQLSQPLEEDPALKQPCYAMLCNVATPENQSCP 229
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|1194462542|gb|OUC16033.1| (hypothetical protein B0A82_03970 [Alkalinema sp. CACIAM 70d]) HSP 1 Score: 161.77 bits (408), Expect = 1.444e-44 Identity = 84/209 (40.19%), Postives = 126/209 (60.29%), Query Frame = 0
Query: 142 YNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKECSTAVTSKRVCPVV 350
Y+D+ F +++I++F+ KIA +G SP + YE +V LS+ +++G + + + A++ V+ P F L CE NA F WLVGP +V + E+ +P TG ++ + V I++CRYLE +C G CV++CK+PTQ FFT+D G+PVT+TPNFED SC M FG P P+ ++ + C +C TA TS VCP V
Sbjct: 8 YHDNWFDRLFIWIFSRKIAKALGQDSP--YPGYEGFVDLSQKIMQGRNAEEQQALVGVVLRSLIPAPVLWTIRTFSRPIPLVCELNAWFATQLFEWLVGPCEVRSVEVTSP-TGKTQMQRSGVHIQKCRYLEQSRCVGMCVNMCKVPTQEFFTQDFGIPVTLTPNFEDFSCEMVFGQIPPPLETEQASQQPCLNQCVTASTSI-VCPKV 212
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|1191680348|gb|OTG32311.1| (hypothetical protein HannXRQ_Chr03g0085241 [Helianthus annuus]) HSP 1 Score: 163.31 bits (412), Expect = 1.787e-44 Identity = 91/231 (39.39%), Postives = 130/231 (56.28%), Query Frame = 0
Query: 128 SLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRN--------FIPYEEYVRLSRLLLRG-GSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKE-CSTAVTSKRVCP 348
S +P P + KYND +F K+++ LF K+ G P YE +V +SR +++G + + V VL S+ PG FR LFP ++ A EFNA +T FF WLVGP++V E V G ++ + V I++CRYLE+ C G CV++CK+PTQ FFT + G+P+TM PNFED+SC M +G P P DPV + C+ + CS A + +CP
Sbjct: 42 SGQPAPMG--QKTKYNDGVFEKVFMSLFARKMEKFSGKPDKETEGKKKGLFDYDYESFVDVSRRVMQGRNRIQQQEVVREVLLSMLPPGAPEQFRKLFP-PTKWAAEFNAALTVPFFHWLVGPSEVIEVE----VNGVKQ--RSGVHIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMIPNFEDMSCEMVYGQPPPPFEEDPVAKQPCFADVCSVANPNASICP 263
BLAST of EWM30570.1 vs. NCBI_GenBank
Match: gi|1009156626|ref|XP_015896339.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Ziziphus jujuba]) HSP 1 Score: 162.54 bits (410), Expect = 2.073e-44 Identity = 96/229 (41.92%), Postives = 133/229 (58.08%), Query Frame = 0
Query: 128 SLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNF------IPYEEYVRLSRLLLRGGS-TKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTAPLPIASDPVCSEGCYKE-CSTAVTSKRVCP 348
S KP P + KYND F K ++ LF K+ A SP+ YE +V +S+ +++G S + + V VL S+ PG + FR LFP ++ A EFNA +T FF WLVGP++V E V G ++ + V I++CRYLE+ C G CV++CK+PTQ FFT + G+P+TM PNFED+SC M +G P P DPV ++ CY E CS + S VCP
Sbjct: 35 SGKPAPLG--QKTKYNDGFFEKAFMTLFARKMENF-AANSPKAEKKGWWEHDYESFVDVSKRVMQGRSRIQQQQVVREVLLSMLPPGAPAQFRKLFP-PTKWAAEFNAALTVPFFHWLVGPSEVIEVE----VNGEKQ--KSGVHIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMIPNFEDMSCEMVYGQVPPPFEEDPVSTQPCYAEICSMSNPSSSVCP 253 The following BLAST results are available for this feature:
BLAST of EWM30570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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