EWM29679.1, cds989 (CDS) Nannochloropsis gaditana

Overview
NameEWM29679.1
Unique Namecds989
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:913666..914163 +
Alignment locationCM002456.1:914284..914442 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29679.1
Producthistone-lysine n
Orig transcript idgnl|cribi|Naga_100299g10.1141.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:913666..914163 +
CM002456.1supercontigCM002456.1:914284..914442 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR003616Post-SET_dom
IPR001214SET_dom
Homology
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|585112254|gb|EWM29679.1| (histone-lysine n [Nannochloropsis gaditana])

HSP 1 Score: 451.825 bits (1161), Expect = 8.769e-161
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQNQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSILEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESIICGLKRERTGHLA 218
            MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQNQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSILEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESIICGLKRERTGHLA
Sbjct:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQNQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSILEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESIICGLKRERTGHLA 218          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|1214712098|gb|OWZ23061.1| (Histone-lysine N-methyltransferase [Phytophthora megakarya])

HSP 1 Score: 163.31 bits (412), Expect = 8.864e-43
Identity = 93/214 (43.46%), Postives = 125/214 (58.41%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQNQLTEDQTMEALRTGSRTDRKKLL--QLCKKRER---REQARQQQAAKESAARKNLTSQFLPGDSI----LEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESI 205
            MY+MEL  G Y+DAR KG+ SRFINHSC PNC L KW VKG  RI I A+ DI  GT LSYDYQF T +  ++KCHC +  CRGT+AP          E +  G+ +  K+L   +  K+R+R   +E+ +  +  K +A R +LTSQ   GD      + +R+GP TR L  A+  ++F VRN   G +F  R++LR      RS T  RE +
Sbjct:  551 MYIMELGKGEYIDARFKGSVSRFINHSCDPNCHLLKWRVKGVNRIAITALKDIEPGTELSYDYQFHTKQAMEWKCHCNSKNCRGTMAP----------EKINQGNDSPVKRLTKKEQVKQRKRAIMQEKIQHDKEVKSTARRLSLTSQVSMGDRTTIDKMVVRTGPATRELQWARHYRLFNVRNAKHGFNFKLRKDLRD----SRSTTSHREQL 750          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|298706866|emb|CBJ25830.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 162.54 bits (410), Expect = 1.456e-42
Identity = 75/165 (45.45%), Postives = 107/165 (64.85%), Query Frame = 0
Query:    2 YVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQNQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSILEIRSGPPTRFLGLAK 166
            Y+MEL    ++DA+ KGN  R INHSC PNC++Q WN+ G+TR+GI A  D++ G  LSYDY+F+TNE+ +FKC CGA  CRGTLAP+ Q  E++  E         RK++LQ  ++  +  QAR Q     +  R +LT + LPGD   E+++GPP ++ G A+
Sbjct:  595 YIMELGQSLFIDAKEKGNLMRLINHSCNPNCDVQAWNIAGYTRLGIYAKKDLAKGESLSYDYKFSTNEKARFKCMCGAENCRGTLAPKEQ--EEEITEDGSKLKGKARKEMLQKRERMAKNRQARSQVGQLVTCKRLSLTGRVLPGDRTAEVKAGPPAKYFGFAR 757          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|301115083|ref|XP_002999311.1| (histone-lysine N-methyltransferase, putative [Phytophthora infestans T30-4] >gi|262111405|gb|EEY69457.1| histone-lysine N-methyltransferase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 159.458 bits (402), Expect = 2.590e-41
Identity = 87/198 (43.94%), Postives = 115/198 (58.08%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQ--NQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSI----LEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRR 192
            MY+MEL  G Y+DAR KG+ SRFINHSC PNC L KW VKG  RI I A+ DI  GT LSYDYQF T +  ++KCHC A  CRGT+AP+  NQ  E    +  +      RK+ L        +E+ +Q +  K +A R +LT+    GD      + +R+GP TR L  AK   +F +R+   G +F  R+E+R  R
Sbjct:  590 MYIMELGKGEYIDARFKGSVSRFINHSCDPNCHLLKWRVKGVNRIAITALKDIEPGTELSYDYQFHTKQAMEWKCHCKAKNCRGTMAPEKINQAHESPVKKLTKKEQIKQRKRALM-------QEKLQQGKEIKSTARRLSLTAHVSMGDRTTIEKMAVRTGPATRELEWAKYYHLFNIRDAKHGFNFKLRKEMRDLR 780          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|567992479|gb|ETL42669.1| (hypothetical protein L916_06577 [Phytophthora parasitica])

HSP 1 Score: 159.458 bits (402), Expect = 2.623e-41
Identity = 88/214 (41.12%), Postives = 121/214 (56.54%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQ--NQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSI----LEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESIICG 208
            MY+MEL  G Y+DAR KG+ SRFINHSC PNC L KW VKG  RI I A+ DI  GT LSYDYQF T +  ++KCHC +  CRGT+AP+  NQ  E    +  +      RK+ L        +E+ +Q +  K +A R +LT+Q   GD      + +R+GP  R L  AK   +F +R+   G +F  R+E+R  R  R+   ++    + G
Sbjct:  713 MYIMELGKGEYIDARFKGSVSRFINHSCDPNCHLLKWRVKGMNRIAITALKDIEPGTELSYDYQFHTKQAMEWKCHCKSKNCRGTMAPEKINQALESPAKKLTKKEQIKQRKRALM-------QEKIQQDKEIKSTARRLSLTAQISMGDRTTMDKMVVRTGPAARELQWAKYYHLFNIRDAKHGFNFKLRKEMRDLRIARQEQVKQEHVSVSG 919          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|566026555|gb|ETI49466.1| (hypothetical protein F443_06765 [Phytophthora parasitica P1569] >gi|568052229|gb|ETM49111.1| hypothetical protein L914_06549 [Phytophthora parasitica])

HSP 1 Score: 159.073 bits (401), Expect = 3.182e-41
Identity = 88/214 (41.12%), Postives = 121/214 (56.54%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQ--NQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSI----LEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESIICG 208
            MY+MEL  G Y+DAR KG+ SRFINHSC PNC L KW VKG  RI I A+ DI  GT LSYDYQF T +  ++KCHC +  CRGT+AP+  NQ  E    +  +      RK+ L        +E+ +Q +  K +A R +LT+Q   GD      + +R+GP  R L  AK   +F +R+   G +F  R+E+R  R  R+   ++    + G
Sbjct:  713 MYIMELGKGEYIDARFKGSVSRFINHSCDPNCHLLKWRVKGVNRIAITALKDIKPGTELSYDYQFHTKQAMEWKCHCKSKNCRGTMAPEKINQALESPAKKLTKKEQIKQRKRALM-------QEKIQQDKEIKSTARRLSLTAQISMGDRTTMDKMVVRTGPAARELQWAKYYHLFNIRDAKHGFNFKLRKEMRDLRIARQEQVKQEHVSVSG 919          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|970630392|gb|KUF77352.1| (Histone-lysine N-methyltransferase [Phytophthora nicotianae] >gi|970662898|gb|KUG00212.1| Histone-lysine N-methyltransferase [Phytophthora nicotianae])

HSP 1 Score: 159.073 bits (401), Expect = 3.244e-41
Identity = 88/214 (41.12%), Postives = 121/214 (56.54%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQ--NQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSI----LEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESIICG 208
            MY+MEL  G Y+DAR KG+ SRFINHSC PNC L KW VKG  RI I A+ DI  GT LSYDYQF T +  ++KCHC +  CRGT+AP+  NQ  E    +  +      RK+ L        +E+ +Q +  K +A R +LT+Q   GD      + +R+GP  R L  AK   +F +R+   G +F  R+E+R  R  R+   ++    + G
Sbjct:  713 MYIMELGKGEYIDARFKGSVSRFINHSCDPNCHLLKWRVKGVNRIAITALKDIEPGTELSYDYQFHTKQAMEWKCHCKSKNCRGTMAPEKINQALESPAKKLTKKEQIKQRKRALM-------QEKIQQDKEIKSTARRLSLTAQISMGDRTTMDKMVVRTGPAARELQWAKYYHLFNIRDAKHGFNFKLRKEMRDLRIARQEQVKQEHVSVSG 919          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|570988863|gb|ETP47168.1| (hypothetical protein F442_06801 [Phytophthora parasitica P10297])

HSP 1 Score: 159.073 bits (401), Expect = 3.244e-41
Identity = 88/214 (41.12%), Postives = 121/214 (56.54%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQ--NQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSI----LEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESIICG 208
            MY+MEL  G Y+DAR KG+ SRFINHSC PNC L KW VKG  RI I A+ DI  GT LSYDYQF T +  ++KCHC +  CRGT+AP+  NQ  E    +  +      RK+ L        +E+ +Q +  K +A R +LT+Q   GD      + +R+GP  R L  AK   +F +R+   G +F  R+E+R  R  R+   ++    + G
Sbjct:  713 MYIMELGKGEYIDARFKGSVSRFINHSCDPNCHLLKWRVKGVNRIAITALKDIEPGTELSYDYQFHTKQAMEWKCHCKSKNCRGTMAPEKINQALESPAKKLTKKEQIKQRKRALM-------QEKIQQDKEIKSTARRLSLTAQISMGDRTTMDKMVVRTGPAARELQWAKYYHLFNIRDAKHGFNFKLRKEMRDLRIARQEQVKQEHVSVSG 919          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|675167061|ref|XP_008892415.1| (hypothetical protein PPTG_02853 [Phytophthora parasitica INRA-310] >gi|567963851|gb|ETK89344.1| hypothetical protein L915_06638 [Phytophthora parasitica] >gi|568021751|gb|ETL95834.1| hypothetical protein L917_06448 [Phytophthora parasitica] >gi|568108597|gb|ETN23221.1| hypothetical protein PPTG_02853 [Phytophthora parasitica INRA-310] >gi|570330253|gb|ETO78201.1| hypothetical protein F444_06832 [Phytophthora parasitica P1976] >gi|570953982|gb|ETP19239.1| hypothetical protein F441_06768 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 159.073 bits (401), Expect = 3.340e-41
Identity = 88/214 (41.12%), Postives = 121/214 (56.54%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQ--NQLTEDQTMEALRTGSRTDRKKLLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSI----LEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRRRLRRSVTEERESIICG 208
            MY+MEL  G Y+DAR KG+ SRFINHSC PNC L KW VKG  RI I A+ DI  GT LSYDYQF T +  ++KCHC +  CRGT+AP+  NQ  E    +  +      RK+ L        +E+ +Q +  K +A R +LT+Q   GD      + +R+GP  R L  AK   +F +R+   G +F  R+E+R  R  R+   ++    + G
Sbjct:  713 MYIMELGKGEYIDARFKGSVSRFINHSCDPNCHLLKWRVKGVNRIAITALKDIEPGTELSYDYQFHTKQAMEWKCHCKSKNCRGTMAPEKINQALESPAKKLTKKEQIKQRKRALM-------QEKIQQDKEIKSTARRLSLTAQISMGDRTTMDKMVVRTGPAARELQWAKYYHLFNIRDAKHGFNFKLRKEMRDLRIARQEQVKQEHVSVSG 919          
BLAST of EWM29679.1 vs. NCBI_GenBank
Match: gi|695387355|ref|XP_009518856.1| (hypothetical protein PHYSODRAFT_487680 [Phytophthora sojae] >gi|348683753|gb|EGZ23568.1| hypothetical protein PHYSODRAFT_487680 [Phytophthora sojae])

HSP 1 Score: 157.918 bits (398), Expect = 7.291e-41
Identity = 85/198 (42.93%), Postives = 116/198 (58.59%), Query Frame = 0
Query:    1 MYVMELESGYYLDARTKGNASRFINHSCAPNCELQKWNVKGFTRIGIMAITDISAGTPLSYDYQFATNEEGKFKCHCGAPTCRGTLAPQNQLTEDQTMEALRTGSRTDRKK--LLQLCKKRERREQARQQQAAKESAARKNLTSQFLPGDSI----LEIRSGPPTRFLGLAKESKIFLVRNVIQGDDFVTRQELRRRR 192
            MY+MEL  G Y+DAR KG+ SRFINHSC PNC L KW VKG  RI I A+ DI  GT LSYDYQF T +  ++KCHC +  CRGT+AP+    ++   + L    +  +KK  L+Q        E+ +  +  K +A R +LT+    GD      + +R+GP  R L  AK + +F+VR+   G +F  R+ELR  R
Sbjct:  596 MYIMELGKGEYIDARFKGSVSRFINHSCDPNCHLLKWRVKGVNRIAITALKDIEPGTELSYDYQFHTKQAMEWKCHCKSANCRGTMAPEKINQQEAPAKKLTKKEQMKQKKRALMQ--------EKIQHDKEIKSTARRLSLTAHVSMGDRTTIDKIAVRTGPAARELKWAKFNHLFMVRDAKHGFNFKLRKELRDMR 785          
The following BLAST results are available for this feature:
BLAST of EWM29679.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112254|gb|EWM29679.1|8.769e-161100.00histone-lysine n [Nannochloropsis gaditana][more]
gi|1214712098|gb|OWZ23061.1|8.864e-4343.46Histone-lysine N-methyltransferase [Phytophthora m... [more]
gi|298706866|emb|CBJ25830.1|1.456e-4245.45conserved unknown protein [Ectocarpus siliculosus][more]
gi|301115083|ref|XP_002999311.1|2.590e-4143.94histone-lysine N-methyltransferase, putative [Phyt... [more]
gi|567992479|gb|ETL42669.1|2.623e-4141.12hypothetical protein L916_06577 [Phytophthora para... [more]
gi|566026555|gb|ETI49466.1|3.182e-4141.12hypothetical protein F443_06765 [Phytophthora para... [more]
gi|970630392|gb|KUF77352.1|3.244e-4141.12Histone-lysine N-methyltransferase [Phytophthora n... [more]
gi|570988863|gb|ETP47168.1|3.244e-4141.12hypothetical protein F442_06801 [Phytophthora para... [more]
gi|675167061|ref|XP_008892415.1|3.340e-4141.12hypothetical protein PPTG_02853 [Phytophthora para... [more]
gi|695387355|ref|XP_009518856.1|7.291e-4142.93hypothetical protein PHYSODRAFT_487680 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna990rna990Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications