EWM29690.1, cds988 (CDS) Nannochloropsis gaditana

Overview
NameEWM29690.1
Unique Namecds988
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:910665..910759 -
Alignment locationCM002456.1:909286..910456 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29690.1
ProductPhotosystem II stability/assembly factor
Orig transcript idgnl|cribi|Naga_100114g2.2475.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:910665..910759 -
CM002456.1supercontigCM002456.1:909286..910456 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal
IPR028203PSII_CF48-like_dom
Homology
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|585112266|gb|EWM29690.1| (Photosystem II stability/assembly factor [Nannochloropsis gaditana])

HSP 1 Score: 856.67 bits (2212), Expect = 0.000e+0
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0
Query:    1 MRKVNFLVAACAMVLGVSPASAFMPFAARSSSAIKMSASTGEKSSRSENMLPDSSVSRRDLVKTTSVAAAALSAAGALGGSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFFGDKGFVLGSEGVLLRYKGIA 421
            MRKVNFLVAACAMVLGVSPASAFMPFAARSSSAIKMSASTGEKSSRSENMLPDSSVSRRDLVKTTSVAAAALSAAGALGGSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFFGDKGFVLGSEGVLLRYKGIA
Sbjct:    1 MRKVNFLVAACAMVLGVSPASAFMPFAARSSSAIKMSASTGEKSSRSENMLPDSSVSRRDLVKTTSVAAAALSAAGALGGSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFFGDKGFVLGSEGVLLRYKGIA 421          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|1072235841|gb|OEU20569.1| (photosystem II stability/assembly factor [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 479.945 bits (1234), Expect = 1.574e-165
Identity = 245/411 (59.61%), Postives = 305/411 (74.21%), Query Frame = 0
Query:   20 ASAFMPFAARSSSAIKMSASTGEKSSRSENMLPDSSV--SRRDLVKTTSVAAAALSAA------GALGGSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKF---FGDKGFVLGSEGVLLRYKG 419
            A+A + F   SS+A   S++    SS   N+  D +    RR  V  T    AA + A      G L    QPA AA+   W+QV  +P   TLYD+DFD+  P HG++VGS+G+F ET+DGG +W  RSF +LD +EEVTYRF   SF +GEGW++GKP ++LHT+D+GK+WERIPLSPKLPGEP+++ + GP  AEMTTS+GAIY T NAGRNWKAQVKETIDATLNRISSSGV GASYFTG IIS +RD   GA+LAVSSRGNFFLTW PG DFW+PHNRGTSRRIQNMGFV+GD +KG WM+LNGG L IC    DL +D  F F ++ I++GG+GI DV+W+++ EVWAVGG  +M+VS+DGGK F+F+KSA++IPGNLY VKF   FG+KGF LGS G+LL+Y G
Sbjct:    5 ATAILAFLVGSSTAFAPSSNVHSASSTRLNLDNDDTAGDDRRTFVTKTGSTVAATALATATGAFGGLAVQPQPAEAAATKMWKQVK-LPFAETLYDIDFDT--PTHGYLVGSRGSFAETSDGGETWEARSFSNLDAEEEVTYRFTVSSFTDGEGWVLGKPALMLHTKDAGKTWERIPLSPKLPGEPTSITSLGPGKAEMTTSSGAIYYTENAGRNWKAQVKETIDATLNRISSSGVSGASYFTGQIISQIRDD-DGAWLAVSSRGNFFLTWEPGDDFWIPHNRGTSRRIQNMGFVEGDLNKGAWMTLNGGKLLICYTEPDLKAD-TFDFKEANIKTGGFGITDVAWRNKSEVWAVGGSNTMYVSQDGGKNFSFDKSANDIPGNLYNVKFFKEFGNKGFALGSNGLLLKYVG 410          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|219122857|ref|XP_002181754.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407030|gb|EEC46968.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 471.855 bits (1213), Expect = 2.092e-162
Identity = 248/409 (60.64%), Postives = 310/409 (75.79%), Query Frame = 0
Query:   17 VSPASAFMP--FAARS-SSAIKMSASTGEKSSRSENMLPDSSVSRRDLVKTTSVAAAALSAAGALGGSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFF---GDKGFVLGSEGVLLRYKG 419
            VS ++AF+P  F+A + + A++M+    E  S       +SS +RR  V+TTS AA    A+ +   +  PA AAS+  W +V  +P   TL+D+DFDS  P HG++VG++G F ET DGG++W  RSF +LDP+EEVTYRF+ +SF +GEGW++GKP +LLHT+DSGK+WERIPLSPKLPGEP+ + A GP+ AEMTTS+GA+Y T NAGRNWKAQVKETIDATLNRISSSGV GASYFTGSII+ VRD L GAYLAVSSRGNFFLTW PGQDFW+PHNRGT RRIQNMGFV+GD  KG+WM+LNGG L I     DL+ D  F F ++ I++GGYGI DV+W++ +EVWAVGG  +M+VS DGGK F F+KS +  PGNLY VKFF   G+ G+ LGS G+LLRY G
Sbjct:   12 VSGSAAFVPNTFSATARTDALRMTTPGYEIES-------ESSGARRAFVQTTSAAAVVSVASASGLVTPPPAEAASSQLWSKVP-LPFEDTLFDIDFDS--PTHGYLVGARGAFAETNDGGKTWEARSFSNLDPEEEVTYRFQVLSFKDGEGWVLGKPTLLLHTKDSGKTWERIPLSPKLPGEPTAIVALGPSRAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVRDDL-GAYLAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVEGDIKKGLWMTLNGGKLFISSEEPDLTKD-VFDFQEADIKTGGYGITDVAWRNPKEVWAVGGSNTMYVSFDGGKKFQFDKSGNAYPGNLYNVKFFPQYGNAGWALGSNGLLLRYTG 408          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|224012791|ref|XP_002295048.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969487|gb|EED87828.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 461.455 bits (1186), Expect = 2.750e-158
Identity = 220/330 (66.67%), Postives = 268/330 (81.21%), Query Frame = 0
Query:   93 WEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKF---FGDKGFVLGSEGVLLRYKG 419
            W QV  +P   T+YD+DFDS  P HG+IVG++G+F ET DGG +W PRSF +LD +EE+TYRF+ VSFNNGEGW++GKP +LLHT+D GK+WERIPLSPKLPGEP+ + ATGPNSAEM TS+GA+Y T NAGRNWKAQVKETIDATLNRISSSGV GASYFTGSI++  RD   GAY+AVSSRGNFFLTW PGQDFW+PHNRGT RRIQNMGFV+GD   G+WM+LNGG L +   +    S EEF F ++ I++GGYG+ DV+W+D+ EVWAVGG  +M+VSKD G+ F F+KSA++IPGNLY VKF   FG+ G+ LGS G+LL+Y G
Sbjct:   78 WRQVK-VPFEDTVYDIDFDS--PTHGYIVGARGSFAETNDGGATWEPRSFSNLDAEEEITYRFQVVSFNNGEGWVLGKPTLLLHTKDGGKTWERIPLSPKLPGEPTGILATGPNSAEMITSSGAVYTTENAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIVNEQRDS-KGAYIAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVRGDIKNGLWMTLNGGKLLVSSSDSVDLSSEEFPFDEANIKTGGYGLTDVAWRDDNEVWAVGGSNTMYVSKDNGRNFVFDKSANDIPGNLYNVKFFREFGNAGWALGSNGLLLKYVG 403          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|298707281|emb|CBJ25908.1| (photosystem II stability/assembly factor HCF136 [Ectocarpus siliculosus])

HSP 1 Score: 449.129 bits (1154), Expect = 3.202e-153
Identity = 233/418 (55.74%), Postives = 301/418 (72.01%), Query Frame = 0
Query:    9 AACAMVLGVSPASAFMPFAARSSSAIKMSA------STGEKSSRSENM-LPDSSVSRRDLVKTTSVAAAALSAAGALGGSTQPAA-AASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFF-GDKGFVLGSEGVLLRY 417
            + CA++  ++  SAF+P      +  ++ A       T   SSR   M L D S SR   +K +++  AA + A        PAA AA+  AWEQ+  +P+ + LYD+ FD + P+HG +VG++GTFLET DGG  W  R+F +LD +EE+ YRF++VS  N E +IIGKPPILLH++D+GK+WER+PLSPKLPGEPS + A G   AEMTTS+GAIY T NAG NW AQVKET+DATLNRISSSGV GASYFTGSII   R +  G+YLAVSSRGNF+LTW PGQDFW+PHNRGTSRRIQNMGFV+   ++G+WM+LNGG +Q+     + +SD    F+++ I+SGGYGI+DV+WK++ E WAVGGGGS++ S DGG+TF F+  A  I  NLY VKFF GDKGF +GS+GVLL+Y
Sbjct:    6 SGCALLAALAGVSAFVPHGLTKPAQQQVKARGFGHEHTSAVSSRPMRMSLDDVSESREGFLKDSALGLAASAVAVGASTGAPPAAEAATVSAWEQIQ-LPVASVLYDIAFDPEHPDHGLVVGAQGTFLETFDGGYKWSVRTFGNLDEEEEINYRFQKVSMYNDEIFIIGKPPILLHSKDAGKTWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAE-DGSYLAVSSRGNFYLTWSPGQDFWIPHNRGTSRRIQNMGFVRDRAAEGLWMTLNGGAMQMSTTLPEGTSDP--LFSETAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGETFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLKY 419          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|676390987|ref|XP_009038771.1| (hypothetical protein AURANDRAFT_29089 [Aureococcus anophagefferens] >gi|323450718|gb|EGB06598.1| hypothetical protein AURANDRAFT_29089 [Aureococcus anophagefferens])

HSP 1 Score: 436.802 bits (1122), Expect = 7.658e-149
Identity = 218/326 (66.87%), Postives = 267/326 (81.90%), Query Frame = 0
Query:   93 WEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFFG-DKGFVLGSEGVLLRY 417
            WE+V+ +P+  TL+D+ FD+    HG++VG+KGTFLET DGG++W PR+F +LD +EEV YRFE+VSF +GEGW++GKPPILLHT D+GKSWERIPLSPKLPGEP+ V A G + AEMTTSTGAIY TTNAGRNWKAQVKETIDATLNR+SSSGV GASYFTGS+ ++ R++  G YLAVSSRGNF+LTW PGQDFW+PHNRGT RRIQ MGFV+GD+SKGVWM+LNGG  Q+    +    D E  F    + SGGYGILD +W+D +E WAVGGG +M+VSKDGGK F F+ SAD+IPGNLY +KFFG + GF LGS+GVL+++
Sbjct:   66 WERVS-LPVSTTLFDIAFDTD--THGYLVGAKGTFLETVDGGKNWKPRTFANLDEEEEVGYRFEKVSFQDGEGWVVGKPPILLHTVDAGKSWERIPLSPKLPGEPTGVVALGKSKAEMTTSTGAIYSTTNAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGSVATIQREK-DGTYLAVSSRGNFYLTWSPGQDFWLPHNRGTPRRIQAMGFVEGDSSKGVWMTLNGG--QMALGGKSAVDDAEPTFNVINLNSGGYGILDAAWRDSKEAWAVGGGNTMYVSKDGGKNFKFDDSADKIPGNLYAIKFFGPNTGFALGSDGVLMKF 385          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|1210521182|dbj|GAX19930.1| (hypothetical protein FisN_1Lh599 [Fistulifera solaris])

HSP 1 Score: 434.491 bits (1116), Expect = 1.080e-147
Identity = 233/368 (63.32%), Postives = 289/368 (78.53%), Query Frame = 0
Query:   58 RRDLVKTTSVAAAALSAAGALG-GSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFF---GDKGFVLGSEGVLLRYKGIA 421
            RR  V+ +  AAA +  A A G  S Q AAA ++  W++V  IP   T+YD+ FD  D  HG++VGS+G F ET DGG++W PRSF +LDP+EEVTYRF+++SF +GEGW++G+P +LLHT+D+GK+WERIPLSPKLPGEP+ + A GP+ AEMTT+TGAIY T NAGRNWKAQVKETIDATLNRISSSG+ GASYFTGSII+ VRD   GAYLAVSSRGNFFLTW P  DFW+PHNRGT RRIQNMGFV+GD  KG+WM+LNGG L I E   DL+ D  F F ++ I++GGYGI DV+W+   EVWAVGG  +M+VS DGGK F+F+KSA++IPGNLY VKFF   G+ G+ LGS G+L+R++G A
Sbjct:   43 RRTFVQQS--AAAVVGTALATGFSSPQSAAAVASKQWKRVD-IPFEDTIYDIAFD--DANHGYLVGSRGAFAETNDGGKTWEPRSFANLDPEEEVTYRFQQISFKDGEGWVLGRPSLLLHTKDAGKTWERIPLSPKLPGEPAAIVALGPSKAEMTTTTGAIYTTDNAGRNWKAQVKETIDATLNRISSSGISGASYFTGSIINQVRDD-QGAYLAVSSRGNFFLTWEPEDDFWIPHNRGTPRRIQNMGFVEGDIQKGLWMTLNGGKLFISEGEPDLTKD-SFDFVEADIKTGGYGITDVAWRTPNEVWAVGGSNTMYVSYDGGKKFSFDKSANDIPGNLYNVKFFPEYGNTGWALGSNGLLMRFEGSA 403          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|873230165|emb|CEM11483.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 436.417 bits (1121), Expect = 1.787e-147
Identity = 217/353 (61.47%), Postives = 264/353 (74.79%), Query Frame = 0
Query:   73 SAAGALGGSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFK-----FADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFFGDK-GFVLGSEGVLLRYKG 419
            +A   +GG        ++  W Q+  I    TL+D+DFD+ +P HG +VG+KGT  ET DGG++W P+S   LDP+EEV+YRF++VSF +GE WIIG+PPILLHT D  K+W+RI LSPKLPG P  ++  GPNSAEMTTS+GAIY T N G NWKAQVKETIDATLNRISSSGV GASY+TGSII+  RD  SG YLAV SRGNF+L++ PGQ +W PHNRG++RRIQNMGF+ GD +KGVWMSLNGG LQ+         D  F+     F    I++GGYGI+DVSWK   EVWAVGG G+M+VS DGGK+F FN +AD IPGNLY+VKFF +K GFVLGS+GVLLRY G
Sbjct:  124 TAGNGVGGMGFEVPKGTDKPWLQIK-IDSRETLFDIDFDASNPRHGLLVGAKGTIFETLDGGQTWNPKSLAVLDPEEEVSYRFQQVSFKDGEAWIIGQPPILLHTTDGAKTWQRIRLSPKLPGAPYGIYTLGPNSAEMTTSSGAIYTTNNGGLNWKAQVKETIDATLNRISSSGVSGASYYTGSIINQQRDA-SGTYLAVGSRGNFWLSYKPGQPYWTPHNRGSNRRIQNMGFIDGDLNKGVWMSLNGGGLQVAR-------DANFEVDVPTFERVNIKTGGYGIIDVSWKGNDEVWAVGGSGTMYVSTDGGKSFKFNNAADGIPGNLYRVKFFDNKQGFVLGSDGVLLRYTG 467          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|1210512341|dbj|GAX28610.1| (hypothetical protein FisN_1Hh599 [Fistulifera solaris])

HSP 1 Score: 431.409 bits (1108), Expect = 1.706e-146
Identity = 233/379 (61.48%), Postives = 292/379 (77.04%), Query Frame = 0
Query:   50 MLPDSSVS---RRDLVKTTSVAAAALSAAGALG-GSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFF---GDKGFVLGSEGVLLRYKGIA 421
             + D S+    RR  ++ +  AAA +  A A G  S Q AAAA++  W++V  IP   T+YD+ FD  D  HG++VGS+G F ET DGG++W PRSF +LDP+EEVTYRF+++SF +GEGW++G+P +LLHT+D+GK+WERIPLSPKLPGEP+ + A GP+ AEMTT+TGAIY T NAGRNWKAQVKETIDATLNRISSSG+ GASYFTGSII+ VRD   GAYLAVSSRGNFFLTW P  DFW+PHNRGT RRIQNMGFV+GD  KG+WM+LNGG L I     DL+ D  F F ++ I++GGYGI DV+W+   EVWAVGG  +M+VS DGGK F+F+KSA++IPGNLY VKFF    + G+ LGS G+L+R++G A
Sbjct:   32 FMADDSIELEDRRTFMQQS--AAAVVGTALATGFSSPQSAAAATSKQWKRVD-IPFEDTIYDIAFD--DANHGYLVGSRGAFAETNDGGKTWEPRSFANLDPEEEVTYRFQQISFKDGEGWVLGRPSLLLHTKDAGKTWERIPLSPKLPGEPAAIVALGPSKAEMTTTTGAIYTTDNAGRNWKAQVKETIDATLNRISSSGISGASYFTGSIINQVRDD-QGAYLAVSSRGNFFLTWEPEDDFWIPHNRGTPRRIQNMGFVEGDIQKGLWMTLNGGKLFISAGEPDLTKD-SFDFVEADIKTGGYGITDVAWRTPNEVWAVGGSNTMYVSYDGGKKFSFDKSANDIPGNLYNVKFFPQYNNAGWALGSNGLLMRFEGSA 403          
BLAST of EWM29690.1 vs. NCBI_GenBank
Match: gi|160331119|ref|XP_001712267.1| (hfc136 [Hemiselmis andersenii] >gi|159765714|gb|ABW97942.1| hfc136 [Hemiselmis andersenii])

HSP 1 Score: 427.172 bits (1097), Expect = 1.085e-144
Identity = 203/326 (62.27%), Postives = 254/326 (77.91%), Query Frame = 0
Query:   93 WEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFFGDK-GFVLGSEGVLLRY 417
            WEQV  IP+   L+D+DF   DP+HGW+VGSKGTFLETTD G++W+PR+F +LDPDEE+TYRFE +SF   +GW+IGKP ILLHT+D GK+W R+P+SPKLPGEP  + A GP++AEMTTS GAIY T N GRNWKAQVKETID+TLNR  SSGV GASYFTG+II V+RD+ +G YLA+SSRGNFFLTW PGQ+FW+P  R TSRRIQ+MGF++ D  +G+WMS  GG L   +   D  S   F F+ S I++GGYGILDV++K++ E+WA  GGG ++ S DGGK++      D++ G+LYK+KFF  K GFVLGS GVLLRY
Sbjct:   85 WEQVE-IPVDTVLFDLDFVKDDPQHGWLVGSKGTFLETTDAGKTWIPRTFANLDPDEELTYRFENISFFQNDGWVIGKPAILLHTKDGGKTWLRVPVSPKLPGEPILITALGPDTAEMTTSAGAIYVTNNGGRNWKAQVKETIDSTLNRTISSGVSGASYFTGNIIGVIRDK-NGKYLAISSRGNFFLTWQPGQEFWIPRARDTSRRIQSMGFIENDLEQGLWMSTRGGGLSFTKSQPDFDSINNFDFSSSDIKTGGYGILDVNFKNKDELWAACGGGILYSSIDGGKSWK-KDDEDKVIGSLYKIKFFNSKLGFVLGSNGVLLRY 407          
The following BLAST results are available for this feature:
BLAST of EWM29690.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112266|gb|EWM29690.1|0.000e+0100.00Photosystem II stability/assembly factor [Nannochl... [more]
gi|1072235841|gb|OEU20569.1|1.574e-16559.61photosystem II stability/assembly factor [Fragilar... [more]
gi|219122857|ref|XP_002181754.1|2.092e-16260.64predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|224012791|ref|XP_002295048.1|2.750e-15866.67predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|298707281|emb|CBJ25908.1|3.202e-15355.74photosystem II stability/assembly factor HCF136 [E... [more]
gi|676390987|ref|XP_009038771.1|7.658e-14966.87hypothetical protein AURANDRAFT_29089 [Aureococcus... [more]
gi|1210521182|dbj|GAX19930.1|1.080e-14763.32hypothetical protein FisN_1Lh599 [Fistulifera sola... [more]
gi|873230165|emb|CEM11483.1|1.787e-14761.47unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210512341|dbj|GAX28610.1|1.706e-14661.48hypothetical protein FisN_1Hh599 [Fistulifera sola... [more]
gi|160331119|ref|XP_001712267.1|1.085e-14462.27hfc136 [Hemiselmis andersenii] >gi|159765714|gb|AB... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna989rna989Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications