EWM20795.1, cds9878 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|585100686|gb|EWM20795.1| (membrane protein [Nannochloropsis gaditana]) HSP 1 Score: 385.571 bits (989), Expect = 1.995e-135 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 Query: 1 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMYKPRMKISNAVFF 194 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMYKPRMKISNAVFF Sbjct: 1 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMYKPRMKISNAVFF 194
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|553184466|ref|XP_005854092.1| (pheromone-regulated membrane protein [Nannochloropsis gaditana CCMP526] >gi|422294970|gb|EKU22269.1| pheromone-regulated membrane protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 310.071 bits (793), Expect = 1.388e-105 Identity = 145/194 (74.74%), Postives = 173/194 (89.18%), Query Frame = 0 Query: 1 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMYKPRMKISNAVFF 194 M+SGT+RMMTALMNALL+GFGLDLGHRM FWE+ SW STE+C PVS W +IPLF++T+TCFNILMK AP QWL ML VAAI ++TINLAPT+ M+ SSTVL AF GVAGNLYAYATNSPAL+PIL+G+FLIVPGGMSV+GV+ W+N+DLNGGL FGSG++++AVSISIGLFASSV+MY+P++KISNAVFF Sbjct: 1 MISGTVRMMTALMNALLIGFGLDLGHRMTFWESNVSWTSTENCNPVSMWTQIPLFIATVTCFNILMKAAPVQWLSMLIVAAIGYVTINLAPTVGEMTPGSSTVLTAFVCGVAGNLYAYATNSPALVPILAGVFLIVPGGMSVRGVEKWLNDDLNGGLDFGSGMMLVAVSISIGLFASSVIMYRPKLKISNAVFF 194
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|585100688|gb|EWM20797.1| (membrane protein [Nannochloropsis gaditana]) HSP 1 Score: 312.768 bits (800), Expect = 2.533e-99 Identity = 145/194 (74.74%), Postives = 173/194 (89.18%), Query Frame = 0 Query: 1 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMYKPRMKISNAVFF 194 M+SGT+RMMTALMNALL+GFGLDLGHRM FWE+ SW STE+C PVS W +IPLF++T+TCFNILMK AP QWL ML VAAI ++TINLAPT+ M+ SSTVL AF GVAGNLYAYATNSPAL+PIL+G+FLIVPGGMSV+GV+ W+N+DLNGGL FGSG++++AVSISIGLFASSV+MY+P++KISNAVFF Sbjct: 577 MISGTVRMMTALMNALLIGFGLDLGHRMTFWESNVSWTSTENCNPVSMWTQIPLFIATVTCFNILMKAAPVQWLSMLIVAAIGYVTINLAPTVGEMTPGSSTVLTAFVCGVAGNLYAYATNSPALVPILAGVFLIVPGGMSVRGVEKWLNDDLNGGLDFGSGMMLVAVSISIGLFASSVIMYRPKLKISNAVFF 770
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|553183310|ref|XP_005853873.1| (pheromone-regulated membrane protein [Nannochloropsis gaditana CCMP526] >gi|422295187|gb|EKU22486.1| pheromone-regulated membrane protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 312.768 bits (800), Expect = 6.201e-99 Identity = 145/194 (74.74%), Postives = 173/194 (89.18%), Query Frame = 0 Query: 1 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMYKPRMKISNAVFF 194 M+SGT+RMMTALMNALL+GFGLDLGHRM FWE+ SW STE+C PVS W +IPLF++T+TCFNILMK AP QWL ML VAAI ++TINLAPT+ M+ SSTVL AF GVAGNLYAYATNSPAL+PIL+G+FLIVPGGMSV+GV+ W+N+DLNGGL FGSG++++AVSISIGLFASSV+MY+P++KISNAVFF Sbjct: 611 MISGTVRMMTALMNALLIGFGLDLGHRMTFWESNVSWTSTENCNPVSMWTQIPLFIATVTCFNILMKAAPVQWLSMLIVAAIGYVTINLAPTVGEMTPGSSTVLTAFVCGVAGNLYAYATNSPALVPILAGVFLIVPGGMSVRGVEKWLNDDLNGGLDFGSGMMLVAVSISIGLFASSVIMYRPKLKISNAVFF 804
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|470436808|ref|XP_004338930.1| (membrane protein, putative [Acanthamoeba castellanii str. Neff] >gi|440795801|gb|ELR16917.1| membrane protein, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 128.257 bits (321), Expect = 8.681e-31 Identity = 65/184 (35.33%), Postives = 112/184 (60.87%), Query Frame = 0 Query: 1 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWV---STEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHN-MSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVL 180 M+SGT R+ +A++ L LGFG+ LG ++ W + +++ + C + IPLFL FN+L++ P QW G++ V A+ LTI+ + + S ++ LAAF VG GN++A + PA++ I++G+ L+VPG + VKGVK+ + +D+ G+ FG ++ IA+SI +GL +++ Sbjct: 650 MISGTTRIFSAIITTLQLGFGMTLGMKLVMWTSEDNFIVMRDSVSCSGIGGPWTIPLFLCVSITFNLLLEAHPRQW-GIMMVTALLSLTISEVTSYYGYFSDELASALAAFAVGAVGNIHARISGHPAIVSIIAGVLLLVPGSIGVKGVKSLMEDDVVSGIQFGFSMLTIALSICVGLLTANLF 832
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|302772280|ref|XP_002969558.1| (hypothetical protein SELMODRAFT_410327 [Selaginella moellendorffii] >gi|300163034|gb|EFJ29646.1| hypothetical protein SELMODRAFT_410327 [Selaginella moellendorffii]) HSP 1 Score: 108.997 bits (271), Expect = 2.045e-24 Identity = 68/188 (36.17%), Postives = 105/188 (55.85%), Query Frame = 0 Query: 2 LSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQP--VSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMYK--PR 185 ++GT R++ L +AL LGFGL +G +W HC P +S W + I NIL+ +QW GM A + ++ +A + +S+STVLAAF VG+ G LY++ T L +LSGI L+VPGG+ V+G+ A D+ G+AF ++++A+SI+IGL + + +K PR Sbjct: 292 VTGTSRVIHGLFSALQLGFGLAIGDSFLWWSKAHD---KAHCTPPSISKWWNTLWLVGYIVASNILLNARLSQWPGMGLAATVGYV---VAYATDKLGTSASTVLAAFSVGITGTLYSHLTGELPLALVLSGILLLVPGGLGVEGIAAMFGRDVASGMAFVFDMLVVALSITIGLLIAKIPTWKTMPR 473
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|672825695|gb|KFH70586.1| (hypothetical protein MVEG_03436 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 108.612 bits (270), Expect = 5.580e-24 Identity = 66/197 (33.50%), Postives = 105/197 (53.30%), Query Frame = 0 Query: 1 MLSGTIRMMTALMNALLLGFGLDLGHRM--AFWENTSSWVSTEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINND--LNGGLAFGSGIVMIAVSISIGLFASSVLMYKPRMKISNAVF 193 M+SG++RM +L+ L LGFGL +G + F E + T +C P + + LF FNI + P QW M+ +++ F A S + ++AF VG+ GNLY T+ A +PIL I LIVPGGM V+ ++ + G +F ++++A+ I++GLFAS++++Y P K NA+ Sbjct: 1074 MISGSVRMFYSLIYCLFLGFGLSIGSNLWDVFREPPPGDLKTGYCHPATEPWRWVLFPLLAIAFNIQLNAQPRQWPVMIVCSSVGFAVSEFAGMYWPHSLHIAAAVSAFVVGLLGNLYERLTHELAFVPILGAILLIVPGGMGVRSSLLLLDQSGHASQGTSFALQMIIVALGIAVGLFASTLVVY-PLGKKRNALL 1269
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|1001605680|gb|KXS09546.1| (DUF1212-domain-containing protein [Gonapodya prolifera JEL478]) HSP 1 Score: 105.531 bits (262), Expect = 4.249e-23 Identity = 58/179 (32.40%), Postives = 102/179 (56.98%), Query Frame = 0 Query: 4 GTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQPVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMY 182 G++R+ A++ ++++G+GL +G +A W S CQPV + ++ +FL F IL++ P Q+ M V A FL P +S++ LAA +G+ GNLY T A+ P+L+GI +VPGG+SV+ A +N+D+ G + ++ +++ I +GLF++ +L+Y Sbjct: 316 GSVRLFHAMLISVMIGYGLSIGSNIASWA-VGSIEPVPACQPVDSRFQLLMFLPVCLAFYILLEAHPRQFPIMAVVTAAGFLVTTFLPA-EKFDTSANNALAALVIGLGGNLYGRLTGDAAVAPMLAGILFLVPGGISVRANMALLNDDIASGTRLVTMVLDVSIGILVGLFSAHLLIY 492
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|1032652422|gb|OAQ33696.1| (DUF1212-domain-containing protein [Mortierella elongata AG-77]) HSP 1 Score: 104.76 bits (260), Expect = 4.468e-23 Identity = 71/195 (36.41%), Postives = 105/195 (53.85%), Query Frame = 0 Query: 1 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQP--------VSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWI-----NNDLNGGLAFGSGIVMIAVSISIGLFASSVLMY 182 ++SG++RM ALM A LGFGL LG + W +VS +H QP V W +F + T NI+ P QWLGM V A+ + T++ + +AAF VG+AG Y T + + +P+LSG+ L+VPG + V+GV A+I D + G F +V IAVSI++G+F S+++ Y Sbjct: 240 IVSGSVRMFYALMYAFFLGFGLSLGAEL--W----IFVSRDHSQPSEDVCKHGVDHWWFFLIFPAVSTSINIVFNAHPCQWLGMTLVTAVGY-TVSY---FMTAGPQVTPAIAAFAVGIAGQAYGRITGNLSYVPLLSGVLLLVPGSVGVRGVLAFIGTDPTQGDPSQGFQFALSMVNIAVSITLGVFCSALVWY 424
BLAST of EWM20795.1 vs. NCBI_GenBank
Match: gi|1183486866|gb|ORZ10590.1| (hypothetical protein BCR41DRAFT_308589 [Lobosporangium transversale]) HSP 1 Score: 104.375 bits (259), Expect = 9.381e-23 Identity = 62/183 (33.88%), Postives = 101/183 (55.19%), Query Frame = 0 Query: 1 MLSGTIRMMTALMNALLLGFGLDLGHRMAFWENTSSWVSTEHCQ-PVSAWAKIPLFLSTITCFNILMKGAPAQWLGMLCVAAISFLTINLAPTLHNMSSSSSTVLAAFFVGVAGNLYAYATNSPALIPILSGIFLIVPGGMSVKGVKAWINNDLNGGLAFGSGIVMIAVSISIGLFASSVLMY 182 ++SG +RM ALM A LGFGL +G + W+ S + CQ P+ W ++ + NI+ P QWLGM V A+ F+ L + + +AAF VG+ G LY T + +P+LSG+ L+VPG + V+G+ A I +D + G F ++ ++V+I++G+F S+++ Y Sbjct: 317 IVSGAVRMFYALMYAFFLGFGLSIGAEL--WDYVS-LTTVSVCQNPIDRWWYFLIYPAVSASINIVFNAHPRQWLGMTLVTAVGFVVTLF---LKSSGPQITAAIAAFCVGITGKLYGRLTGQLSYVPLLSGVLLLVPGSVGVRGILAIIGSDPSQGFVFVLTMIHVSVAITLGVFCSALVWY 493 The following BLAST results are available for this feature:
BLAST of EWM20795.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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