EWM20818.1, cds9853 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20818.1 vs. NCBI_GenBank
Match: gi|585100739|gb|EWM20818.1| (hypothetical protein Naga_100519g4 [Nannochloropsis gaditana]) HSP 1 Score: 231.876 bits (590), Expect = 3.180e-77 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
Query: 1 MSIPPSSRPPRFGGKGNGKLEMFKFGLYVSIPVIASIIYGTPDNMQNIVNKFRYVEYPAEDNRDGDVLVGQSISKEERARAMAALEKKEDTKSKGDDTAAETKKGKWGGLWKA 113
MSIPPSSRPPRFGGKGNGKLEMFKFGLYVSIPVIASIIYGTPDNMQNIVNKFRYVEYPAEDNRDGDVLVGQSISKEERARAMAALEKKEDTKSKGDDTAAETKKGKWGGLWKA
Sbjct: 1 MSIPPSSRPPRFGGKGNGKLEMFKFGLYVSIPVIASIIYGTPDNMQNIVNKFRYVEYPAEDNRDGDVLVGQSISKEERARAMAALEKKEDTKSKGDDTAAETKKGKWGGLWKA 113
BLAST of EWM20818.1 vs. NCBI_GenBank
Match: gi|553191840|ref|XP_005855469.1| (hypothetical protein NGA_0139900 [Nannochloropsis gaditana CCMP526] >gi|422293598|gb|EKU20898.1| hypothetical protein NGA_0139900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 228.024 bits (580), Expect = 1.127e-75 Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = 0
Query: 1 MSIPPSSRPPRFGGKGNGKLEMFKFGLYVSIPVIASIIYGTPDNMQNIVNKFRYVEYPAEDNRDGDVLVGQSISKEERARAMAALEKKEDTKSKGDDTAAETKKGKWGGLWKA 113
MSIPPSSRPPRFGGKGNGKLE+FKFGLYVSIPVIASIIYGTPDNMQNIVNKFRYVEYPAEDNRDGDVLVGQSISKEERARAMAALEKKED KSKGDDTAAETKKGKWGGLWKA
Sbjct: 1 MSIPPSSRPPRFGGKGNGKLEIFKFGLYVSIPVIASIIYGTPDNMQNIVNKFRYVEYPAEDNRDGDVLVGQSISKEERARAMAALEKKEDIKSKGDDTAAETKKGKWGGLWKA 113
BLAST of EWM20818.1 vs. NCBI_GenBank
Match: gi|675169153|ref|XP_008893461.1| (hypothetical protein PPTG_01824 [Phytophthora parasitica INRA-310] >gi|566022019|gb|ETI44930.1| hypothetical protein F443_10375 [Phytophthora parasitica P1569] >gi|567959358|gb|ETK84931.1| hypothetical protein L915_10150 [Phytophthora parasitica] >gi|567988065|gb|ETL38349.1| hypothetical protein L916_10058 [Phytophthora parasitica] >gi|568017303|gb|ETL91480.1| hypothetical protein L917_09987 [Phytophthora parasitica] >gi|568047704|gb|ETM44777.1| hypothetical protein L914_10021 [Phytophthora parasitica] >gi|568107068|gb|ETN21698.1| hypothetical protein PPTG_01824 [Phytophthora parasitica INRA-310] >gi|570325626|gb|ETO73574.1| hypothetical protein F444_10487 [Phytophthora parasitica P1976] >gi|570949500|gb|ETP14757.1| hypothetical protein F441_10327 [Phytophthora parasitica CJ01A1] >gi|570982872|gb|ETP42827.1| hypothetical protein F442_10293 [Phytophthora parasitica P10297] >gi|970645774|gb|KUF86147.1| hypothetical protein AM587_10009107 [Phytophthora nicotianae] >gi|970651669|gb|KUF90447.1| hypothetical protein AM587_10005242 [Phytophthora nicotianae] >gi|970656935|gb|KUF94885.1| hypothetical protein AM588_10004952 [Phytophthora nicotianae]) HSP 1 Score: 53.1434 bits (126), Expect = 3.083e-7 Identity = 22/66 (33.33%), Postives = 41/66 (62.12%), Query Frame = 0
Query: 17 NGKLEMFKFGLYVSIPVIASIIYGTPDNMQNIVNKFRYVEYPAEDNRDGDVLVGQSISKEERARAM 82
+ K E+ + G+Y+SIP++A+ IY PD + I+N+++Y++YP Q++S+EE + M
Sbjct: 3 SAKWEIARIGVYISIPIVATCIYAQPDCINYIINRWKYIQYP-----------PQAVSREEYYKKM 57 The following BLAST results are available for this feature:
BLAST of EWM20818.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|