EWM29693.1, cds984 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|585112269|gb|EWM29693.1| (selenium binding protein [Nannochloropsis gaditana]) HSP 1 Score: 425.246 bits (1092), Expect = 1.779e-150 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 Query: 1 MVSKKASNVVKGKKKPAAKKVKKAAKTAPAAKKASLPTKKAPAAKKPVAATSSVPIKEASGSLPKEAGTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFSEAQVALPSNFQPSAPYEILDMRRRRFVEGSSVLDPLPLGEVSRILLAQQQETINYVASKSSKPKLV 214 MVSKKASNVVKGKKKPAAKKVKKAAKTAPAAKKASLPTKKAPAAKKPVAATSSVPIKEASGSLPKEAGTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFSEAQVALPSNFQPSAPYEILDMRRRRFVEGSSVLDPLPLGEVSRILLAQQQETINYVASKSSKPKLV Sbjct: 1 MVSKKASNVVKGKKKPAAKKVKKAAKTAPAAKKASLPTKKAPAAKKPVAATSSVPIKEASGSLPKEAGTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFSEAQVALPSNFQPSAPYEILDMRRRRFVEGSSVLDPLPLGEVSRILLAQQQETINYVASKSSKPKLV 214
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|1150739096|ref|XP_020243674.1| (selenoprotein H-like, partial [Asparagus officinalis]) HSP 1 Score: 83.1889 bits (204), Expect = 5.356e-17 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 0 Query: 67 AGTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFSE 149 A +G IV+EACKQC FK RA I+++ L+ P + +NPE+P +G F VR +GE+ S+ GL RPF P+K +D E Sbjct: 29 AAGDGSSWGIVIEACKQCNSFKTRANIVKEGLESAIPGIDVTINPEKPRRGCFEVRKASGEIFISLLGLKRPFTPMKNLDMDE 111
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|743787150|ref|XP_010922346.1| (PREDICTED: selenoprotein H [Elaeis guineensis]) HSP 1 Score: 78.5666 bits (192), Expect = 1.461e-14 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 0 Query: 75 SIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDF 147 +I+VEACKQC FK RA ++++ L+ P++ +NPE+P +G F +R ++GEV S+ + RPF P+K +D Sbjct: 100 TIIVEACKQCNSFKTRANMVKEGLEKAVPDISVSVNPEKPRRGCFEIRKESGEVFVSLLNMPRPFTPMKKLDM 172
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|901816195|gb|KMZ70492.1| (selenoprotein H-like Rdx protein [Zostera marina]) HSP 1 Score: 77.7962 bits (190), Expect = 3.223e-14 Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 71 GKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFSE 149 GKV+SI++EACKQCQ F + A ++ L+ KPE++ +NPE+P +G F VR GE+ S+ L RPF+ +K ++ + Sbjct: 100 GKVNSIIIEACKQCQSFNRTALKVKDGLQKNKPEVEVTINPEKPRRGCFEVRDVNGEIFISLLELKRPFKKMKELNLDD 178
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|1063497623|ref|XP_017983619.1| (PREDICTED: selenoprotein H [Theobroma cacao]) HSP 1 Score: 77.0258 bits (188), Expect = 3.538e-14 Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = 0 Query: 4 KKASNVVKGKKKPAA----KKVKKAAKTAPAAKKASL--PTKKAPAAKKPVAATS-----SVPIKEAS--GSLPKEAGTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDF 147 +K ++ +G+ KP K+V ++ P A+ + L P K+ P AK +A +V ++EA+ E G++ K ++VVE CKQC FK RA ++ L+ P +K +LNPE+P +G F +R + GE S+ + RPF+P+K +D Sbjct: 6 RKVTDGNEGEAKPLGQETLKRVTRSMTKQPGAESSELAQPNKEKPKAKANASAKEKKVKVAVAVEEAAPEDLTVSEDGSHNK--TVVVEHCKQCNSFKTRAVQVKDGLEKGVPGIKVLLNPEKPRRGCFEIREEGGEKFISLLDMKRPFKPMKDLDM 160
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|672165678|ref|XP_008802752.1| (PREDICTED: uncharacterized protein LOC103716503 [Phoenix dactylifera]) HSP 1 Score: 77.0258 bits (188), Expect = 4.373e-14 Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0 Query: 70 NGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDF 147 G +I+VEACKQC FK RA ++++ L+ P + +NPE+P +G F +R ++GEV S+ + RPF P+K +D Sbjct: 95 GGSSKTIIVEACKQCTSFKTRANMVKEGLEKAVPGISVSVNPEKPRRGCFEIRKESGEVFVSLLNMPRPFTPMKKLDM 172
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|1028965780|ref|XP_016726397.1| (PREDICTED: selenoprotein H-like [Gossypium hirsutum]) HSP 1 Score: 76.2554 bits (186), Expect = 6.087e-14 Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = 0 Query: 35 SLPTKKAPAAKKPVAATSSVPIKEASGSLPKE-----AGTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFS 148 SLPTK+ P AK S+ + + P+E G++ K ++VVE CKQC FK RA + L+ P +K +LNPE+P +G F +R + GE S+ + RPF+P+K +D Sbjct: 43 SLPTKEKPKAKAKRQKKSANEDGAKAEAAPEELAVADGGSHNK--TVVVEHCKQCNSFKTRAFQVRDGLEKGVPWVKVLLNPEKPRRGCFEIREEGGETFISLLDMKRPFKPMKELDME 159
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|568860162|ref|XP_006483595.1| (PREDICTED: selenoprotein H [Citrus sinensis] >gi|641848363|gb|KDO67240.1| hypothetical protein CISIN_1g028564mg [Citrus sinensis]) HSP 1 Score: 76.2554 bits (186), Expect = 1.304e-13 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 0 Query: 68 GTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFSE 149 G K ++V+E CKQC FK RA ++ L+ P + +LNPE+P +G F +R D GE S+ + RPF+P+K +D E Sbjct: 116 GDESKERTVVIEHCKQCNSFKTRANHVKDGLEKGVPGINVLLNPEKPRRGCFEIREDGGEKFISLLDMKRPFKPMKDLDMDE 197
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|1035938728|gb|OAY65970.1| (hypothetical protein ACMD2_12407 [Ananas comosus]) HSP 1 Score: 75.485 bits (184), Expect = 1.365e-13 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = 0 Query: 64 PKEAGTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFSEAQVAL 154 P +G +I+VEACKQC FK RA ++ L+ P + +NPE+P +G F +R D GEV S+ + RPF+ +K +D E V + Sbjct: 82 PISSGDGDASKTIIVEACKQCNSFKTRAIKVKDGLESAVPGVTVTINPEKPRRGCFEIREDGGEVFVSLLDMPRPFKLMKNLDMDEVIVDI 172
BLAST of EWM29693.1 vs. NCBI_GenBank
Match: gi|567916258|ref|XP_006450135.1| (hypothetical protein CICLE_v10009502mg [Citrus clementina] >gi|557553361|gb|ESR63375.1| hypothetical protein CICLE_v10009502mg [Citrus clementina]) HSP 1 Score: 76.2554 bits (186), Expect = 1.446e-13 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 0 Query: 68 GTNGKVSSIVVEACKQCQCFKKRAEILEQHLKVLKPELKFVLNPERPTKGVFIVRTDTGEVLWSMTGLTRPFQPLKAVDFSE 149 G K ++V+E CKQC FK RA ++ L+ P + +LNPE+P +G F +R D GE S+ + RPF+P+K +D E Sbjct: 116 GDESKERTVVIEHCKQCNSFKTRANHVKDGLEKGVPGINVLLNPEKPRRGCFEIRKDGGEKFISLLDMKRPFKPMKDLDMDE 197 The following BLAST results are available for this feature:
BLAST of EWM29693.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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