EWM20855.1, cds9809 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|585100795|gb|EWM20855.1| (hypothetical protein Naga_100164g1 [Nannochloropsis gaditana]) HSP 1 Score: 422.55 bits (1085), Expect = 1.227e-149 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 Query: 1 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIAIVPPHKDYWVQGTCEPYEAAWAPGPPFFVTGGGKNCDVYEEPPEEKQKNWRQSGRDEARVMLNALFREQEDSQRRRRLNYRQSPLLWNIRSSF 208 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIAIVPPHKDYWVQGTCEPYEAAWAPGPPFFVTGGGKNCDVYEEPPEEKQKNWRQSGRDEARVMLNALFREQEDSQRRRRLNYRQSPLLWNIRSSF Sbjct: 1 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIAIVPPHKDYWVQGTCEPYEAAWAPGPPFFVTGGGKNCDVYEEPPEEKQKNWRQSGRDEARVMLNALFREQEDSQRRRRLNYRQSPLLWNIRSSF 208
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|585102651|gb|EWM22206.1| (hypothetical protein Naga_100291g4 [Nannochloropsis gaditana]) HSP 1 Score: 134.806 bits (338), Expect = 7.302e-33 Identity = 73/147 (49.66%), Postives = 90/147 (61.22%), Query Frame = 0 Query: 1 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIAIVPPHKDYWVQGTCEPYEAAWAPGPPFFVTGG 147 +AG Y FVG GT GSP S EAG G Y+A G IG+PV DF GI + GE+ V AG LV IG P VE + IE F+G GG ++VGTG V+GYSP+ E +A+V H D+W+ G+CEP AWAPG FF+ GG Sbjct: 250 VAGDYFFVGAGTFSSHGSPVAQYMSIGGEAGSGCLGYVATGTAVLIGAPVNDFAGIWTTFGIGEYYGVSAGLLVMIGCPMVEITGIEYFQGLGGAVYVGTGGAVLGYSPILEFVALVNEHFDFWIAGSCEPEHGAWAPGKAFFIPGG 396
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|585110107|gb|EWM27806.1| (hypothetical protein Naga_100149g10 [Nannochloropsis gaditana]) HSP 1 Score: 105.145 bits (261), Expect = 1.218e-22 Identity = 64/143 (44.76%), Postives = 81/143 (56.64%), Query Frame = 0 Query: 1 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIAIVPPHKDYWVQGTCEPYEAAWAPGPPFF 143 + GG+ F G G +I SP V+ EAG GG Y G + S V F G + + G ++V AGFLVWI P V S +E F G GGT+FVG GA V+G SPL E + I+ H DYW+ G+CEP+ AWA GP F Sbjct: 176 LLGGFAFNGAGVYIGHFSPFVSMIGCGVEAGAGGYAY-NVGIASFHWSSVTTFAGTWSAFMYGGMMSVPAGFLVWIYCPTVAVSGVESFWGRGGTVFVGAGAAVMGRSPLIEIMRIINLHADYWIMGSCEPFVEAWAGGPIKF 317
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|585104563|gb|EWM23493.1| (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 94.7449 bits (234), Expect = 5.806e-19 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 0 Query: 3 GGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIA-IVPPHKDYWVQGTCE 130 G F+G G I GSP++ + A E G GG ++ AGY + G V++F+ IA + GE++AV AGFL WI PF+E +AIE G +++G GA+V+ +P+ E V ++W+ GTCE Sbjct: 489 GEVNFIGSGVMIATGSPAMEYIAQASENGQGGNTFIGAGYASFTGCVVLEFISIANIFMLGEYIAVDAGFLTWIASPFIEAAAIEYAFQLGSIVYIGAGAMVLWATPVVEVYGPRVSRSVEFWIMGTCE 617
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|553185366|ref|XP_005854242.1| (hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526] >gi|422294822|gb|EKU22122.1| hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 89.7373 bits (221), Expect = 3.134e-17 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 0 Query: 3 GGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIA-IVPPHKDYWVQGTC 129 G F+G G I GSP++ + A E G GG ++ AGY + G V++F+ IA + GE++AV AGFL WI PF+E +AIE G +++G GA+V+ +P+ E V ++W+ TC Sbjct: 374 GEVNFIGSGVMIATGSPAMEYIAQASENGQGGNTFIGAGYASFTGCVVLEFISIANIFMLGEYIAVDAGFLTWIASPFIEAAAIEYAFQLGSIVYIGAGAMVLWATPVVEVYGPRVSRSVEFWIMRTC 501
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|553178295|ref|XP_005852539.1| (hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526] >gi|422295994|gb|EKU23293.1| hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 70.8626 bits (172), Expect = 9.317e-11 Identity = 44/94 (46.81%), Postives = 52/94 (55.32%), Query Frame = 0 Query: 1 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGG 94 +AG Y FVG GT GSP S EAG G Y+A G IG+PV DF GI + GE+ V AG LV IG P +E + IE F+G GG Sbjct: 527 VAGDYFFVGAGTFSSHGSPVAQYMSIGGEAGSGCLGYVATGTAVLIGAPVNDFAGIWTTFGIGEYYGVSAGLLVMIGCPMLEITGIEFFQGLGG 620
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|585108063|gb|EWM26075.1| (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana]) HSP 1 Score: 65.4698 bits (158), Expect = 7.481e-9 Identity = 57/204 (27.94%), Postives = 86/204 (42.16%), Query Frame = 0 Query: 1 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIAIVPPHKDYWVQGTCEPYEAA-----------WAPGPPFFVTGGGKNCDVYEEPPEEKQKNWRQS--GRDEARVMLNALFREQEDSQRRR 191 +AG FVG G I +G PS+ A ST +GIGG Y AG +GSP V++ G +A AGF ++G P A+ F G GGTL+ G+G VV SP + P +V G + + A +A F T + + KQ+ R+ G + + N + + ++R+ Sbjct: 354 LAGSSIFVGSGASINVGVPSLFAYSTNTFSGIGGFSYNGAGVSVWVGSPSVNWASTYSFFGLGGTLADSAGFTTFVGSPTFSAYALFYFAGQGGTLWKGSGGAVVALSP------VYAPASRQYVSGNADNFYVAGRSFNDAKGLTYASRSKFASTNSKNKTNGMRKMTRHKQRRVRKDIVGGSKGKHEENEEIKHESTFEKRK 551
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|553186171|ref|XP_005854372.1| (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >gi|422294687|gb|EKU21987.1| hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 64.6994 bits (156), Expect = 1.158e-8 Identity = 44/110 (40.00%), Postives = 58/110 (52.73%), Query Frame = 0 Query: 1 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPL 110 +AG FVG G I +G PS+ A ST +GIGG Y AG +GSP V++ G +A AGF ++G P A+ F G GGTL+ G+G VV SP+ Sbjct: 489 LAGSSIFVGSGASINVGVPSLFAYSTNTFSGIGGFSYNGAGVSVWVGSPSVNWASTYSFFGLGGTLADSAGFTTFVGSPTFSAYALFYFAGQGGTLWKGSGGAVVALSPV 598
BLAST of EWM20855.1 vs. NCBI_GenBank
Match: gi|585108528|gb|EWM26475.1| (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 61.6178 bits (148), Expect = 1.255e-7 Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 0 Query: 1 MAGGYTFVGGGTHICIGSPSVAAQSTAQEAGIGGTFYLAAGYVTAIGSPVVDFVGIALSTLAGEFVAVGAGFLVWIGGPFVEYSAIEVFKGYGGTLFVGTGALVVGYSPLAEAIAIV 117 M G F+G G +G P + ST G GG Y AG +G PV F + G A GAG ++W+G P A+ F G G +FVG G+ V+ SP++ +A++ Sbjct: 538 MTGMMDFLGTGASSHVGVPCSMSGSTGAMHGQGGFSYNGAGSSVWVGCPVAMFWAVYSFLGTGGVAAQGAGIMIWVGNPVFMPMAVSYFAGLGAIMFVGAGSAVIALSPVSMPMAVM 654 The following BLAST results are available for this feature:
BLAST of EWM20855.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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