EWM20870.1, cds9803 (CDS) Nannochloropsis gaditana

Overview
NameEWM20870.1
Unique Namecds9803
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:218834..219042 +
Alignment locationKK037256.1:219096..219254 +
Alignment locationKK037256.1:219366..219477 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20870.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100787g2.1583.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:218834..219042 +
KK037256.1supercontigKK037256.1:219096..219254 +
KK037256.1supercontigKK037256.1:219366..219477 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20870.1 vs. NCBI_GenBank
Match: gi|585100813|gb|EWM20870.1| (hypothetical protein Naga_100787g2 [Nannochloropsis gaditana])

HSP 1 Score: 335.109 bits (858), Expect = 1.454e-116
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MRHSIGPCAAWGQCTDKQGVRLTFFRRVAMRVLCVHWLRSACRMINEIYLDMGAETKRCKGCQERMTQEIRVYMGSNNHNKGRGEQDGNAALAAIGTSIPPHGGKIVVETGKLNIKYHSFSSISFASYHCNHCHEIMKKDVGIDVMLGPSRLAQGIRHF 159
            MRHSIGPCAAWGQCTDKQGVRLTFFRRVAMRVLCVHWLRSACRMINEIYLDMGAETKRCKGCQERMTQEIRVYMGSNNHNKGRGEQDGNAALAAIGTSIPPHGGKIVVETGKLNIKYHSFSSISFASYHCNHCHEIMKKDVGIDVMLGPSRLAQGIRHF
Sbjct:    1 MRHSIGPCAAWGQCTDKQGVRLTFFRRVAMRVLCVHWLRSACRMINEIYLDMGAETKRCKGCQERMTQEIRVYMGSNNHNKGRGEQDGNAALAAIGTSIPPHGGKIVVETGKLNIKYHSFSSISFASYHCNHCHEIMKKDVGIDVMLGPSRLAQGIRHF 159
The following BLAST results are available for this feature:
BLAST of EWM20870.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100813|gb|EWM20870.1|1.454e-116100.00hypothetical protein Naga_100787g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9834rna9834Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications