EWM20869.1, cds9802 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20869.1 vs. NCBI_GenBank
Match: gi|585100812|gb|EWM20869.1| (hypothetical protein Naga_100787g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0 Query: 1 MSSSAPPGPTSLVPSPLSLSFTPAGGRSRRSCGRRSFSICSSSLSRTTAPGLGILQRRTRRAWSSICLRLLARHAQDGHHPLPRRFCPCFPHLAFPLLLLLCLLCTHLSTSKPHQHASAFLNAPLHSQHVTRLSTPARHGPIISPLSAPARRHAPLRRSRPLPPLFFSPALLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEINNVRQNFFQKFLDVRAERTLDQLEEKGVDVEALTGGMGEEDEWGNRLKEVQRRKEEEAAAKVLMEAEDEGRKRKRRRRKGRREGR 325 MSSSAPPGPTSLVPSPLSLSFTPAGGRSRRSCGRRSFSICSSSLSRTTAPGLGILQRRTRRAWSSICLRLLARHAQDGHHPLPRRFCPCFPHLAFPLLLLLCLLCTHLSTSKPHQHASAFLNAPLHSQHVTRLSTPARHGPIISPLSAPARRHAPLRRSRPLPPLFFSPALLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEINNVRQNFFQKFLDVRAERTLDQLEEKGVDVEALTGGMGEEDEWGNRLKEVQRRKEEEAAAKVLMEAEDEGRKRKRRRRKGRREGR Sbjct: 1 MSSSAPPGPTSLVPSPLSLSFTPAGGRSRRSCGRRSFSICSSSLSRTTAPGLGILQRRTRRAWSSICLRLLARHAQDGHHPLPRRFCPCFPHLAFPLLLLLCLLCTHLSTSKPHQHASAFLNAPLHSQHVTRLSTPARHGPIISPLSAPARRHAPLRRSRPLPPLFFSPALLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEINNVRQNFFQKFLDVRAERTLDQLEEKGVDVEALTGGMGEEDEWGNRLKEVQRRKEEEAAAKVLMEAEDEGRKRKRRRRKGRREGR 325
BLAST of EWM20869.1 vs. NCBI_GenBank
Match: gi|1210511601|dbj|GAX29415.1| (hypothetical protein FisN_16Hh145 [Fistulifera solaris]) HSP 1 Score: 74.3294 bits (181), Expect = 1.164e-11 Identity = 32/72 (44.44%), Postives = 49/72 (68.06%), Query Frame = 0 Query: 171 LLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEINN 242 +L +GTPE A ILLVGYFVLGP DLY++ KEVG+ + N++T +D F+ ME++ + + + E+N+ Sbjct: 7 VLGIGTPELATILLVGYFVLGPSDLYKIVKEVGKFIQNVRTFSTDLTTTFESNMESQLQLQDIRKAQQELND 78
BLAST of EWM20869.1 vs. NCBI_GenBank
Match: gi|1210514828|dbj|GAX26307.1| (hypothetical protein FisN_16Lh145 [Fistulifera solaris]) HSP 1 Score: 74.3294 bits (181), Expect = 1.496e-11 Identity = 32/72 (44.44%), Postives = 49/72 (68.06%), Query Frame = 0 Query: 171 LLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEINN 242 +L +GTPE A ILLVGYFVLGP DLY++ KEVG+ + N++T +D F+ ME++ + + + E+N+ Sbjct: 7 VLGIGTPELATILLVGYFVLGPSDLYKIVKEVGKFIQNVRTFSTDLTTTFESNMESQLQLQDIRKAQQELND 78
BLAST of EWM20869.1 vs. NCBI_GenBank
Match: gi|397570884|gb|EJK47508.1| (hypothetical protein THAOC_33764 [Thalassiosira oceanica]) HSP 1 Score: 74.7146 bits (182), Expect = 4.064e-11 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 0 Query: 134 STPARHGPIIS--PLSAPARRHAPLRR----------SRPLPPLFFSPALLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEINN 242 S P R G ++ P + R H L+R + L + +L VG PE A+ LLVGYFVLGP DLY++ KE+G+ + N +T G++A K F+ ME + + + + E+N+ Sbjct: 35 SIPTRAGRTVAHQPQTNHNRHHDALQRRTGNRQARQSTTSLNFMGSDGGILGVGAPEVAVTLLVGYFVLGPSDLYKLVKEIGKFVQNFRTLGTEAAKSFEGTMENQLEIEGLRKAQAELND 155
BLAST of EWM20869.1 vs. NCBI_GenBank
Match: gi|1072233770|gb|OEU18500.1| (hypothetical protein FRACYDRAFT_260421 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 67.781 bits (164), Expect = 5.671e-9 Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 160 RPLPPLFF---SPALLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEINN 242 R L+F +L +GTPE ILLVGYFVLGP DL+++ KEVG+ + N+Q+ ++A + +ME + + + + E+N+ Sbjct: 81 RSNTQLYFMGSDGGILGIGTPEIFTILLVGYFVLGPSDLFKLTKEVGKFVQNVQSFATEATNTLETSMEDQLQLEEIRKAQRELND 166
BLAST of EWM20869.1 vs. NCBI_GenBank
Match: gi|219118030|ref|XP_002179798.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408851|gb|EEC48784.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 67.781 bits (164), Expect = 5.726e-9 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 0 Query: 170 ALLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAE 227 LL +G PE ILLVGYFVLGP DLY++ KE+G+ + N+++ G+D F+ ME + Sbjct: 81 GLLGIGGPELFTILLVGYFVLGPSDLYKLVKEIGKFIQNIRSLGTDLSTTFESNMENQ 138
BLAST of EWM20869.1 vs. NCBI_GenBank
Match: gi|224013148|ref|XP_002295226.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969188|gb|EED87530.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 67.3958 bits (163), Expect = 6.350e-9 Identity = 31/74 (41.89%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 168 SPALLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEIN 241 S LL+ T A+ L+VGYFVLGP DLY++ KE+G+ + N +T G++A K F+ ME + M + + E+N Sbjct: 81 SITLLHFTTTRQAVTLIVGYFVLGPSDLYKLVKEIGKFIQNFRTLGAEATKSFESTMENQLEMTELRKAQAELN 154 The following BLAST results are available for this feature:
BLAST of EWM20869.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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