EWM20875.1, cds9798 (CDS) Nannochloropsis gaditana

Overview
NameEWM20875.1
Unique Namecds9798
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:209867..210319 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20875.1
Productprotein kinase
Partialtrue
Orig transcript idgnl|cribi|Naga_102264g1.10255.mrna
GbkeyCDS
End range.
End range210319
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:209867..210319 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|585100820|gb|EWM20875.1| (protein kinase, partial [Nannochloropsis gaditana])

HSP 1 Score: 296.59 bits (758), Expect = 1.289e-101
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query:    1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFPRRPPPPPGHGGRAEEGRGARAEEGEGKGRSQGGETGTPCPPRRSLRKRRPSCGVSWRNLPPDESAPSSPPTPLPWSFPLPHSFVPPAPLLPECNPPVT 150
            PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFPRRPPPPPGHGGRAEEGRGARAEEGEGKGRSQGGETGTPCPPRRSLRKRRPSCGVSWRNLPPDESAPSSPPTPLPWSFPLPHSFVPPAPLLPECNPPVT
Sbjct:    1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFPRRPPPPPGHGGRAEEGRGARAEEGEGKGRSQGGETGTPCPPRRSLRKRRPSCGVSWRNLPPDESAPSSPPTPLPWSFPLPHSFVPPAPLLPECNPPVT 150          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|635369761|emb|CCI42119.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 72.7886 bits (177), Expect = 3.851e-12
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    9 YTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52
            Y  A+DWWSLGT+ +EML G PPF+D N+  MC KIL+ PLRFP
Sbjct:  715 YGTAIDWWSLGTLIYEMLTGWPPFFDQNYDVMCTKILKAPLRFP 758          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|1183380387|gb|ORY05834.1| (kinase-like domain-containing protein [Clohesyomyces aquaticus])

HSP 1 Score: 72.0182 bits (175), Expect = 6.902e-12
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFPRRPPPPPG 60
            P   T AGYT+ VDWW+LG + +EML G PPFYD N + M  KIL +PL FP +   PP 
Sbjct:  459 PELLTGAGYTKTVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFPGQEIVPPA 518          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|325184985|emb|CCA19476.1| (protein kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 72.0182 bits (175), Expect = 7.320e-12
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    8 GYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52
            G+ +AVDWWSLGT+ +EML G PPFYD N  +M +KIL  PLRFP
Sbjct:  281 GHGKAVDWWSLGTLIYEMLTGLPPFYDQNMQRMYDKILNAPLRFP 325          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|635367324|emb|CCI44484.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 71.633 bits (174), Expect = 7.759e-12
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    6 HAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52
            + G+ +AVDWWSLGT+ +EML G PPFYD N  +M +KIL  PLRFP
Sbjct:  279 NKGHGKAVDWWSLGTLIYEMLTGLPPFYDQNMQRMYDKILNAPLRFP 325          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|928514750|ref|XP_014076172.1| (hypothetical protein COCC4DRAFT_26007 [Bipolaris maydis ATCC 48331] >gi|477585174|gb|ENI02263.1| hypothetical protein COCC4DRAFT_26007 [Bipolaris maydis ATCC 48331])

HSP 1 Score: 71.633 bits (174), Expect = 8.194e-12
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52
            P   T AGYT+AVDWW+LG + +EML G PPFYD N + M  KIL +PL FP
Sbjct:  451 PELLTGAGYTKAVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFP 502          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|325190267|emb|CCA24743.1| (protein kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 71.633 bits (174), Expect = 8.318e-12
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    6 HAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52
            + G+ +AVDWWSLGT+ +EML G PPFYD N  +M +KIL  PLRFP
Sbjct:  285 NKGHGKAVDWWSLGTLIYEMLTGLPPFYDQNMQRMYDKILNAPLRFP 331          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|636594029|ref|XP_008028353.1| (hypothetical protein SETTUDRAFT_164268 [Setosphaeria turcica Et28A] >gi|482806838|gb|EOA83890.1| hypothetical protein SETTUDRAFT_164268 [Setosphaeria turcica Et28A])

HSP 1 Score: 71.633 bits (174), Expect = 8.428e-12
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52
            P   T AGYT+AVDWW+LG + +EML G PPFYD N + M  KIL +PL FP
Sbjct:  448 PELLTGAGYTKAVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFP 499          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|451995690|gb|EMD88158.1| (hypothetical protein COCHEDRAFT_94126 [Bipolaris maydis C5])

HSP 1 Score: 71.633 bits (174), Expect = 8.430e-12
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52
            P   T AGYT+AVDWW+LG + +EML G PPFYD N + M  KIL +PL FP
Sbjct:  449 PELLTGAGYTKAVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFP 500          
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|627824630|ref|XP_007684797.1| (hypothetical protein COCMIDRAFT_2498 [Bipolaris oryzae ATCC 44560] >gi|576935125|gb|EUC48632.1| hypothetical protein COCMIDRAFT_2498 [Bipolaris oryzae ATCC 44560])

HSP 1 Score: 71.633 bits (174), Expect = 8.510e-12
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52
            P   T AGYT+AVDWW+LG + +EML G PPFYD N + M  KIL +PL FP
Sbjct:  448 PELLTGAGYTKAVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFP 499          
The following BLAST results are available for this feature:
BLAST of EWM20875.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100820|gb|EWM20875.1|1.289e-101100.00protein kinase, partial [Nannochloropsis gaditana][more]
gi|635369761|emb|CCI42119.1|3.851e-1263.64unnamed protein product [Albugo candida][more]
gi|1183380387|gb|ORY05834.1|6.902e-1253.33kinase-like domain-containing protein [Clohesyomyc... [more]
gi|325184985|emb|CCA19476.1|7.320e-1264.44protein kinase putative [Albugo laibachii Nc14][more]
gi|635367324|emb|CCI44484.1|7.759e-1261.70unnamed protein product [Albugo candida][more]
gi|928514750|ref|XP_014076172.1|8.194e-1259.62hypothetical protein COCC4DRAFT_26007 [Bipolaris m... [more]
gi|325190267|emb|CCA24743.1|8.318e-1261.70protein kinase putative [Albugo laibachii Nc14][more]
gi|636594029|ref|XP_008028353.1|8.428e-1259.62hypothetical protein SETTUDRAFT_164268 [Setosphaer... [more]
gi|451995690|gb|EMD88158.1|8.430e-1259.62hypothetical protein COCHEDRAFT_94126 [Bipolaris m... [more]
gi|627824630|ref|XP_007684797.1|8.510e-1259.62hypothetical protein COCMIDRAFT_2498 [Bipolaris or... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9829rna9829Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications