EWM20875.1, cds9798 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|585100820|gb|EWM20875.1| (protein kinase, partial [Nannochloropsis gaditana]) HSP 1 Score: 296.59 bits (758), Expect = 1.289e-101 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0 Query: 1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFPRRPPPPPGHGGRAEEGRGARAEEGEGKGRSQGGETGTPCPPRRSLRKRRPSCGVSWRNLPPDESAPSSPPTPLPWSFPLPHSFVPPAPLLPECNPPVT 150 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFPRRPPPPPGHGGRAEEGRGARAEEGEGKGRSQGGETGTPCPPRRSLRKRRPSCGVSWRNLPPDESAPSSPPTPLPWSFPLPHSFVPPAPLLPECNPPVT Sbjct: 1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFPRRPPPPPGHGGRAEEGRGARAEEGEGKGRSQGGETGTPCPPRRSLRKRRPSCGVSWRNLPPDESAPSSPPTPLPWSFPLPHSFVPPAPLLPECNPPVT 150
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|635369761|emb|CCI42119.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 72.7886 bits (177), Expect = 3.851e-12 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0 Query: 9 YTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52 Y A+DWWSLGT+ +EML G PPF+D N+ MC KIL+ PLRFP Sbjct: 715 YGTAIDWWSLGTLIYEMLTGWPPFFDQNYDVMCTKILKAPLRFP 758
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|1183380387|gb|ORY05834.1| (kinase-like domain-containing protein [Clohesyomyces aquaticus]) HSP 1 Score: 72.0182 bits (175), Expect = 6.902e-12 Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFPRRPPPPPG 60 P T AGYT+ VDWW+LG + +EML G PPFYD N + M KIL +PL FP + PP Sbjct: 459 PELLTGAGYTKTVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFPGQEIVPPA 518
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|325184985|emb|CCA19476.1| (protein kinase putative [Albugo laibachii Nc14]) HSP 1 Score: 72.0182 bits (175), Expect = 7.320e-12 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0 Query: 8 GYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52 G+ +AVDWWSLGT+ +EML G PPFYD N +M +KIL PLRFP Sbjct: 281 GHGKAVDWWSLGTLIYEMLTGLPPFYDQNMQRMYDKILNAPLRFP 325
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|635367324|emb|CCI44484.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 71.633 bits (174), Expect = 7.759e-12 Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0 Query: 6 HAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52 + G+ +AVDWWSLGT+ +EML G PPFYD N +M +KIL PLRFP Sbjct: 279 NKGHGKAVDWWSLGTLIYEMLTGLPPFYDQNMQRMYDKILNAPLRFP 325
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|928514750|ref|XP_014076172.1| (hypothetical protein COCC4DRAFT_26007 [Bipolaris maydis ATCC 48331] >gi|477585174|gb|ENI02263.1| hypothetical protein COCC4DRAFT_26007 [Bipolaris maydis ATCC 48331]) HSP 1 Score: 71.633 bits (174), Expect = 8.194e-12 Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0 Query: 1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52 P T AGYT+AVDWW+LG + +EML G PPFYD N + M KIL +PL FP Sbjct: 451 PELLTGAGYTKAVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFP 502
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|325190267|emb|CCA24743.1| (protein kinase putative [Albugo laibachii Nc14]) HSP 1 Score: 71.633 bits (174), Expect = 8.318e-12 Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0 Query: 6 HAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52 + G+ +AVDWWSLGT+ +EML G PPFYD N +M +KIL PLRFP Sbjct: 285 NKGHGKAVDWWSLGTLIYEMLTGLPPFYDQNMQRMYDKILNAPLRFP 331
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|636594029|ref|XP_008028353.1| (hypothetical protein SETTUDRAFT_164268 [Setosphaeria turcica Et28A] >gi|482806838|gb|EOA83890.1| hypothetical protein SETTUDRAFT_164268 [Setosphaeria turcica Et28A]) HSP 1 Score: 71.633 bits (174), Expect = 8.428e-12 Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0 Query: 1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52 P T AGYT+AVDWW+LG + +EML G PPFYD N + M KIL +PL FP Sbjct: 448 PELLTGAGYTKAVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFP 499
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|451995690|gb|EMD88158.1| (hypothetical protein COCHEDRAFT_94126 [Bipolaris maydis C5]) HSP 1 Score: 71.633 bits (174), Expect = 8.430e-12 Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0 Query: 1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52 P T AGYT+AVDWW+LG + +EML G PPFYD N + M KIL +PL FP Sbjct: 449 PELLTGAGYTKAVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFP 500
BLAST of EWM20875.1 vs. NCBI_GenBank
Match: gi|627824630|ref|XP_007684797.1| (hypothetical protein COCMIDRAFT_2498 [Bipolaris oryzae ATCC 44560] >gi|576935125|gb|EUC48632.1| hypothetical protein COCMIDRAFT_2498 [Bipolaris oryzae ATCC 44560]) HSP 1 Score: 71.633 bits (174), Expect = 8.510e-12 Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0 Query: 1 PPSSTHAGYTQAVDWWSLGTVCFEMLYGSPPFYDPNFSKMCNKILRQPLRFP 52 P T AGYT+AVDWW+LG + +EML G PPFYD N + M KIL +PL FP Sbjct: 448 PELLTGAGYTKAVDWWTLGVLLYEMLTGLPPFYDENTNDMYRKILTEPLHFP 499 The following BLAST results are available for this feature:
BLAST of EWM20875.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|