EWM20893.1, cds9785 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|585100844|gb|EWM20893.1| (Tetratricopeptide TPR-1 [Nannochloropsis gaditana]) HSP 1 Score: 829.706 bits (2142), Expect = 0.000e+0 Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query: 1 MADEPVSVSSPTSSGPGTMRTKYTEASLSSSHFSAKEIPAVEGRDDVEEEEFFEAENDVNVVEDIGAEDLSEQFEELRVVPEEERDAEKARGLKEEGNTCYQAQDFQGAAECYGLAIKFCPYQYDKEKELAEARRRAWAAQEEEERARKSGEENVATPETGGSGVSGATAPSGTGGKEGTTGSCGGSHQADATRAEEEKEPFAEFKEECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQKQSGVGKGLFVLNDIIVPGVMWNISGTAASLCLLDFGSQVFSAFTSKHSFTSHHVHLIEMLN 402
MADEPVSVSSPTSSGPGTMRTKYTEASLSSSHFSAKEIPAVEGRDDVEEEEFFEAENDVNVVEDIGAEDLSEQFEELRVVPEEERDAEKARGLKEEGNTCYQAQDFQGAAECYGLAIKFCPYQYDKEKELAEARRRAWAAQEEEERARKSGEENVATPETGGSGVSGATAPSGTGGKEGTTGSCGGSHQADATRAEEEKEPFAEFKEECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQKQSGVGKGLFVLNDIIVPGVMWNISGTAASLCLLDFGSQVFSAFTSKHSFTSHHVHLIEMLN
Sbjct: 1 MADEPVSVSSPTSSGPGTMRTKYTEASLSSSHFSAKEIPAVEGRDDVEEEEFFEAENDVNVVEDIGAEDLSEQFEELRVVPEEERDAEKARGLKEEGNTCYQAQDFQGAAECYGLAIKFCPYQYDKEKELAEARRRAWAAQEEEERARKSGEENVATPETGGSGVSGATAPSGTGGKEGTTGSCGGSHQADATRAEEEKEPFAEFKEECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQKQSGVGKGLFVLNDIIVPGVMWNISGTAASLCLLDFGSQVFSAFTSKHSFTSHHVHLIEMLN 402
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|553190068|ref|XP_005855119.1| (hypothetical protein NGA_0094500 [Nannochloropsis gaditana CCMP526] >gi|422293938|gb|EKU21238.1| hypothetical protein NGA_0094500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0 Identity = 339/341 (99.41%), Postives = 341/341 (100.00%), Query Frame = 0
Query: 1 MADEPVSVSSPTSSGPGTMRTKYTEASLSSSHFSAKEIPAVEGRDDVEEEEFFEAENDVNVVEDIGAEDLSEQFEELRVVPEEERDAEKARGLKEEGNTCYQAQDFQGAAECYGLAIKFCPYQYDKEKELAEARRRAWAAQEEEERARKSGEENVATPETGGSGVSGATAPSGTGGKEGTTGSCGGSHQADATRAEEEKEPFAEFKEECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK 341
MADEPVSVSSPTSSGPGTMRTKYTEASLSSSHFSAKEIPAVEGRDDVEEEEFFEAENDVNVVEDIGAEDLSEQFEELRVVPEEERDAEKARGLKE+GNTCYQAQDFQGAAECYGLAIKFCPYQYDKEKELAEARRRAWAAQEEEERARKSGEENVATPETGGSGVSGATAPSGTGGKEGTTGSCGGSHQADATRAEEEKEPFAEFKEECAVYYCNRAACWVHLGRD+EVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK
Sbjct: 1 MADEPVSVSSPTSSGPGTMRTKYTEASLSSSHFSAKEIPAVEGRDDVEEEEFFEAENDVNVVEDIGAEDLSEQFEELRVVPEEERDAEKARGLKEKGNTCYQAQDFQGAAECYGLAIKFCPYQYDKEKELAEARRRAWAAQEEEERARKSGEENVATPETGGSGVSGATAPSGTGGKEGTTGSCGGSHQADATRAEEEKEPFAEFKEECAVYYCNRAACWVHLGRDREVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK 341
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|397637571|gb|EJK72724.1| (hypothetical protein THAOC_05716 [Thalassiosira oceanica]) HSP 1 Score: 157.532 bits (397), Expect = 1.942e-41 Identity = 98/251 (39.04%), Postives = 130/251 (51.79%), Query Frame = 0
Query: 93 LKEEGNTCYQAQDFQGAAECYGLAIKFCPY--QYDKEKELAEARRRAWAAQEEEERARKSGEENVATPETGGSGVSGATAPSGTGGKEGTTGSCGGSHQADATRAEEEKEPFAEFKEECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK 341
LK GN ++ ++ A + Y AI+ CPY + E R A+ EER R E+ +A A +P+G G +E G + + + P F + AVY+ NRAAC +HLG E + DC +AL Y KA MRR A ER++ E AL+D LDP N+ R +M L K RM+KLK ET+GKLKDLGNS+L NFG+SLDNF QDP TG YS S+ +
Sbjct: 63 LKALGNGDFKQGNYLDAIDHYTDAIEACPYGETHGPSGEEILQMRDAF-----EERNR---EKMLAIQRKEMEDRRKARSPAGKGNEEDKADDGGETDEGEEDPLPTFVPPRHVFGTKLAVYHANRAACNLHLGHYAETIRDCDIALLFNPTYVKAYMRRGTAHERVEDTEKALRDVTTAFELDPTNKPARRQMERLRKLEDERMQKLKDETMGKLKDLGNSILGNFGMSLDNFSAVQDPKTGGYSISYNQ 305
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|223996855|ref|XP_002288101.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220977217|gb|EED95544.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 150.214 bits (378), Expect = 1.062e-40 Identity = 73/133 (54.89%), Postives = 90/133 (67.67%), Query Frame = 0
Query: 205 FKEECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSF 337
+ + AVY+ NRAA +HLGR+ E +EDC +AL L Y KAL+RR A+ER++ E ALKD K L L+P N + + L+K RMEKLK ET+GKLKDLGNS+L NFGLSLDNF QDP TG YS
Sbjct: 3 YSTKLAVYHANRAATLLHLGRNSEAIEDCDIALLLNPTYVKALLRRCTANERVENTEQALKDAKAALLLEPNNTAAKKTVIRLQKVEEERMEKLKEETMGKLKDLGNSILGNFGLSLDNFNAVQDPKTGGYSI 135
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|919063875|ref|XP_013413539.1| (PREDICTED: tetratricopeptide repeat protein 1-like [Lingula anatina]) HSP 1 Score: 152.525 bits (384), Expect = 1.102e-39 Identity = 71/139 (51.08%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 205 FKEECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQKQS 343
F++E A+ Y NRAAC +HL + ++ +EDC+ AL+L Y KAL+RRA+ E+ +KL++AL+DYK+V+ +DP R L ++ R EK+K E IGKLK+LGN VL FG+S DNFK+QQDPNTGSYS FQ+ +
Sbjct: 150 FQKERAIMYSNRAACRLHLKQYEKAIEDCTKALELNPNYLKALLRRAEMYEKTEKLDEALEDYKKVIEMDPTQHTAREACIRLPQQITERNEKMKDEMIGKLKELGNMVLKPFGMSTDNFKLQQDPNTGSYSVQFQQNA 288
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|1133452588|ref|XP_019864402.1| (PREDICTED: tetratricopeptide repeat protein 1-like isoform X2 [Amphimedon queenslandica]) HSP 1 Score: 150.984 bits (380), Expect = 2.554e-39 Identity = 70/135 (51.85%), Postives = 100/135 (74.07%), Query Frame = 0
Query: 207 EECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK 341
+E +V + NRAAC++ LG+ +EVVEDC+ AL+LK Y KAL+RR Q+ E L++L++AL+DYK+VL ++P + RA L ++ + E+LK E GKLK+LG++VL FGLS NFK++QDPNTG YS +FQK
Sbjct: 140 QEVSVCHSNRAACYLKLGKHEEVVEDCTKALELKPDYLKALIRRGQSYEALERLDEALEDYKKVLEIEPHQPIARAAALRLPQQITEQHERLKAEMFGKLKELGDAVLKPFGLSTSNFKLEQDPNTGGYSVNFQK 274
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|340370734|ref|XP_003383901.1| (PREDICTED: tetratricopeptide repeat protein 1-like isoform X1 [Amphimedon queenslandica]) HSP 1 Score: 150.984 bits (380), Expect = 3.100e-39 Identity = 70/135 (51.85%), Postives = 100/135 (74.07%), Query Frame = 0
Query: 207 EECAVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK 341
+E +V + NRAAC++ LG+ +EVVEDC+ AL+LK Y KAL+RR Q+ E L++L++AL+DYK+VL ++P + RA L ++ + E+LK E GKLK+LG++VL FGLS NFK++QDPNTG YS +FQK
Sbjct: 143 QEVSVCHSNRAACYLKLGKHEEVVEDCTKALELKPDYLKALIRRGQSYEALERLDEALEDYKKVLEIEPHQPIARAAALRLPQQITEQHERLKAEMFGKLKELGDAVLKPFGLSTSNFKLEQDPNTGGYSVNFQK 277
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|219116456|ref|XP_002179023.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409790|gb|EEC49721.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 146.747 bits (369), Expect = 3.159e-39 Identity = 71/134 (52.99%), Postives = 96/134 (71.64%), Query Frame = 0
Query: 210 AVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLD-KLEDA-LKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK 341
A YYCNRAA +H+ R +EDC++A+ L Y KA +RR+ A E+L +L+ + L+D ++ L LDP N +R+ + L+K AR+EKLK ET+ KLKDLGNS+L NFGLSLDNF+ Q+DPNTGSYS SF +
Sbjct: 13 ATYYCNRAAALLHMERYDHAIEDCNLAIILNPAYVKAYIRRSTAYEQLQHQLQHSTLQDAQQALQLDPSNAQIRSTVARLQKLEDARLEKLKVETMDKLKDLGNSILGNFGLSLDNFQTQKDPNTGSYSISFNQ 146
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|769801282|ref|XP_011626633.1| (tetratricopeptide repeat protein 1 isoform X2 [Amborella trichopoda]) HSP 1 Score: 150.214 bits (378), Expect = 3.476e-39 Identity = 70/132 (53.03%), Postives = 94/132 (71.21%), Query Frame = 0
Query: 210 AVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK 341
++ + NRA C+ LGRD E V++C+ ALKL Y KAL+RRA+A+E+L+ E+A+ D K +L LDP N R + LE A + EK+K E IGKLKDLGNS+L FG+S+DNFK +DPNTGSYS +FQ+
Sbjct: 121 SMCHANRAVCFSKLGRDTETVKECTEALKLNPTYVKALLRRAEANEKLENFEEAIADRKRILELDPANEQSRRAIGRLEPLAAEKREKMKEEMIGKLKDLGNSILGRFGMSVDNFKAVKDPNTGSYSINFQR 252
BLAST of EWM20893.1 vs. NCBI_GenBank
Match: gi|1173115524|ref|XP_020528474.1| (tetratricopeptide repeat protein 1 isoform X1 [Amborella trichopoda]) HSP 1 Score: 149.828 bits (377), Expect = 4.139e-39 Identity = 70/132 (53.03%), Postives = 94/132 (71.21%), Query Frame = 0
Query: 210 AVYYCNRAACWVHLGRDQEVVEDCSVALKLKSGYAKALMRRAQASERLDKLEDALKDYKEVLALDPGNRVVRAKMPGLEKECAARMEKLKTETIGKLKDLGNSVLSNFGLSLDNFKMQQDPNTGSYSFSFQK 341
++ + NRA C+ LGRD E V++C+ ALKL Y KAL+RRA+A+E+L+ E+A+ D K +L LDP N R + LE A + EK+K E IGKLKDLGNS+L FG+S+DNFK +DPNTGSYS +FQ+
Sbjct: 122 SMCHANRAVCFSKLGRDTETVKECTEALKLNPTYVKALLRRAEANEKLENFEEAIADRKRILELDPANEQSRRAIGRLEPLAAEKREKMKEEMIGKLKDLGNSILGRFGMSVDNFKAVKDPNTGSYSINFQR 253 The following BLAST results are available for this feature:
BLAST of EWM20893.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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