EWM20891.1, cds9784 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20891.1 vs. NCBI_GenBank
Match: gi|585100842|gb|EWM20891.1| (hypothetical protein Naga_100201g8 [Nannochloropsis gaditana]) HSP 1 Score: 1530 bits (3960), Expect = 0.000e+0 Identity = 787/787 (100.00%), Postives = 787/787 (100.00%), Query Frame = 0 Query: 1 MDVRPPPRDFRVILQRLQAVLESSASHAQADVEMARRRREEAWGEEKARYLARIAAVEGECRALEEASAASVSAAHREKQRESGEDRGQSHALENTLALAEGMKGEEAAQGEKKSPSTGPGREGEAEELRRRCFQLEAELEGWKGGEPKEVTDLRNETEELRRRCQMLEAESASLRARDSGSERNRTSSGHTPGSIPATTPPSRVSDGEALAQELEEARREAMEWEAAAEARALELKHVRERVMVLEKEQKTAEAQQQEALRVTRATTEAELGHLRAELDRLRGRQGEGEEEEARSEERNRWTREIQRLEHALAEEKQKKTLTHAGSLSESELSKRLAEAAGKLRGKEHEMGQLRVVIEQQRELVKAKAHELERARREGEAHLRRLEAAEEMVKGLVEEKDRHLHALRAADARAQEADLEALREEVAVWKARVATMEANAVRQEEESENKVRGLLERLQAAEHAVHEQGAELAGTRADLGVLTRDFEQSETAKANLQKVLEQFQREKAAEMKHWERTHAKQLAAEAAAAETREAHLRTSFQAQIADAQAQATLSVEESERETRKALAECQQARREAASMRKALDEAIARLHSNESDVVPRQLIGNLVVSYYSQGRPTETLEIIARTLGLADEERIKVGLRALRPGGGRRAGVGEGGGAGSPGKRGLVGGLFSRVGGVMSSPRKEFVPENGTEGKTLGDLWLDYLMKETEEEVEEGEEEEEEEDGGEDQEEKEIAPPDLVSLEAPVLTSVGNKEREGKPPGMGESKALQEEEGDGTGGVIESKVHPPS 787 MDVRPPPRDFRVILQRLQAVLESSASHAQADVEMARRRREEAWGEEKARYLARIAAVEGECRALEEASAASVSAAHREKQRESGEDRGQSHALENTLALAEGMKGEEAAQGEKKSPSTGPGREGEAEELRRRCFQLEAELEGWKGGEPKEVTDLRNETEELRRRCQMLEAESASLRARDSGSERNRTSSGHTPGSIPATTPPSRVSDGEALAQELEEARREAMEWEAAAEARALELKHVRERVMVLEKEQKTAEAQQQEALRVTRATTEAELGHLRAELDRLRGRQGEGEEEEARSEERNRWTREIQRLEHALAEEKQKKTLTHAGSLSESELSKRLAEAAGKLRGKEHEMGQLRVVIEQQRELVKAKAHELERARREGEAHLRRLEAAEEMVKGLVEEKDRHLHALRAADARAQEADLEALREEVAVWKARVATMEANAVRQEEESENKVRGLLERLQAAEHAVHEQGAELAGTRADLGVLTRDFEQSETAKANLQKVLEQFQREKAAEMKHWERTHAKQLAAEAAAAETREAHLRTSFQAQIADAQAQATLSVEESERETRKALAECQQARREAASMRKALDEAIARLHSNESDVVPRQLIGNLVVSYYSQGRPTETLEIIARTLGLADEERIKVGLRALRPGGGRRAGVGEGGGAGSPGKRGLVGGLFSRVGGVMSSPRKEFVPENGTEGKTLGDLWLDYLMKETEEEVEEGEEEEEEEDGGEDQEEKEIAPPDLVSLEAPVLTSVGNKEREGKPPGMGESKALQEEEGDGTGGVIESKVHPPS Sbjct: 1 MDVRPPPRDFRVILQRLQAVLESSASHAQADVEMARRRREEAWGEEKARYLARIAAVEGECRALEEASAASVSAAHREKQRESGEDRGQSHALENTLALAEGMKGEEAAQGEKKSPSTGPGREGEAEELRRRCFQLEAELEGWKGGEPKEVTDLRNETEELRRRCQMLEAESASLRARDSGSERNRTSSGHTPGSIPATTPPSRVSDGEALAQELEEARREAMEWEAAAEARALELKHVRERVMVLEKEQKTAEAQQQEALRVTRATTEAELGHLRAELDRLRGRQGEGEEEEARSEERNRWTREIQRLEHALAEEKQKKTLTHAGSLSESELSKRLAEAAGKLRGKEHEMGQLRVVIEQQRELVKAKAHELERARREGEAHLRRLEAAEEMVKGLVEEKDRHLHALRAADARAQEADLEALREEVAVWKARVATMEANAVRQEEESENKVRGLLERLQAAEHAVHEQGAELAGTRADLGVLTRDFEQSETAKANLQKVLEQFQREKAAEMKHWERTHAKQLAAEAAAAETREAHLRTSFQAQIADAQAQATLSVEESERETRKALAECQQARREAASMRKALDEAIARLHSNESDVVPRQLIGNLVVSYYSQGRPTETLEIIARTLGLADEERIKVGLRALRPGGGRRAGVGEGGGAGSPGKRGLVGGLFSRVGGVMSSPRKEFVPENGTEGKTLGDLWLDYLMKETEEEVEEGEEEEEEEDGGEDQEEKEIAPPDLVSLEAPVLTSVGNKEREGKPPGMGESKALQEEEGDGTGGVIESKVHPPS 787
BLAST of EWM20891.1 vs. NCBI_GenBank
Match: gi|397569655|gb|EJK46883.1| (hypothetical protein THAOC_34430 [Thalassiosira oceanica]) HSP 1 Score: 94.7449 bits (234), Expect = 2.523e-16 Identity = 93/321 (28.97%), Postives = 158/321 (49.22%), Query Frame = 0 Query: 416 EADLEALREEVAVWKARVATMEANAVR-------------------------QEEESENKVRGLLERLQAAEHAVHEQGAELAGTRADLGVLTRDFEQSETAKANLQKVLEQFQREKAAEMKHW-ERTHAKQLAAEAAAAETREAHLRTSFQAQIADAQAQATLSVEESERETRKALAECQQARREAASMRKALDEAIARLHSNESDVVPRQLIGNLVVSYY-SQGRPT-ETLEIIARTLGLADEERIKVGLRALRPGGGRRAGVGEGGGAGSPGKRGLVGGLFSRVGGVMSSPRKEFVPENGTEGKTLGDLWLDYLMKET 708 ++ LE+LR+E A K R+A+M ++ + Q++ SE+ + L ER AA V +L RADL + D +++ TA NL LE FQ E+ +E+ E+ A + A +AA + EA ++ + AQ+ D Q A SV+ E + + + RRE++++RKALDEAIARL +++ DV+ R LI N+++ ++ +G+ + + ++ L ++E+ K A +GEG GA + ++ V + P K V + EG+T+ D W+ +LM ET Sbjct: 528 QSQLESLRKENASMKDRLASMSEDSEKLGGLKMELQMLEEERLRERSALESAQDKTSEDYAQVLNER-DAANATVRNLEQQLVAARADLELAHTDRDRAVTANDNLTMALEAFQSERESEISLLTEQRIADEEAVKAAHQASLEA-MKEANAAQMRDVQYAADKSVQNQLAEMDRMETDLLECRRESSNLRKALDEAIARLQTSQEDVIDRNLIKNVILDWHGKRGKEKRDVMILLGSILNFNEDEKDK-------------ALIGEGPGA--------LHKVYDAVAAPL-PPAKLNV--DKIEGETVRDKWVSFLMAET 822
BLAST of EWM20891.1 vs. NCBI_GenBank
Match: gi|224008875|ref|XP_002293396.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970796|gb|EED89132.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 88.1965 bits (217), Expect = 3.296e-14 Identity = 74/248 (29.84%), Postives = 126/248 (50.81%), Query Frame = 0 Query: 471 ELAGTRADLGVLTRDFEQSETAKANLQKVLEQFQREKAAEMKH-WERTHAKQLAAEAAAAETREAHLRTSFQAQIADAQAQATLSVEESERETRKALAECQQARREAASMRKALDEAIARLHSNESDVVPRQLIGNLVVSYYS-QGRPTETLEI-IARTLGLADEERIKVGLRALRPGGGRRAGVGEGGGAGSPGKRGLVGGLFSRVGGVMSSPRKEFVPE----NGTEGKTLGDLWLDYLMKETEEE 711 +LA AD+ + D ++ A NLQ+ LE FQ E+ AE+ E+ A + A EAA + EA +R + A+I D Q A SV+ S E K A Q+ R+ ++R+ALDEAI+RL +++ DV+ R LI N+++ +++ +G+ + + I + L ++E+ K A + EG G R+ G +++P P + EG ++ + W+++L+ ET EE Sbjct: 720 QLAAAHADVELANTDRNRALMANENLQRALEDFQSERDAEIALLMEQRTADEEAIEAAHNASLEA-MREANAAEIRDIQYAANKSVQNSLVEIDKMEATIQECRKNNLNLRRALDEAISRLQTSQEDVIDRSLIKNIILDWHAKKGKAKQDVMILLGSILHFTEDEKDK-------------AFISEGPGT------------VDRIVGAVAAP---LPPSKLNVDKLEGDSVREKWVNFLLAETGEE 938
BLAST of EWM20891.1 vs. NCBI_GenBank
Match: gi|971514248|dbj|GAQ83959.1| (ER-Golgi vesicle-tethering protein [Klebsormidium nitens]) HSP 1 Score: 87.4261 bits (215), Expect = 6.162e-14 Identity = 52/141 (36.88%), Postives = 86/141 (60.99%), Query Frame = 0 Query: 579 MRKALDEAIARLH--SNESD-VVPRQLIGNLVVSYYSQGRPTETLEIIARTLGLADEERIKVGLRALRPGGGRRAGVGEGGGAGSPGKRGLVGGLFSRVGGVM--SSPRKEFVPENGTEGKTLGDLWLDYLMKETEEEVEE 714 +RKAL++++ R+H S++SD V R+++ L+V+Y+ + E L+++AR LG +E++ +VGL L GRR V G G+PG+ +VG +F GG SSPR V + T DLW+D+L+KE +++ E+ Sbjct: 662 LRKALEQSMTRIHRMSSDSDQYVDRRIVIKLLVTYFEKRHSAEALDLMARILGFTEEDKKRVGLAQL----GRRGVV--SGVLGAPGR--IVGAVF---GGASAPSSPRAS-VSDRDPSSATFTDLWIDFLLKEAQQQEEQ 790 The following BLAST results are available for this feature:
BLAST of EWM20891.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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