EWM20883.1, cds9782 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|585100834|gb|EWM20883.1| (brix domain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 Query: 1 MALKSSPKGQGKRDTGPKAKRKAPTPSAKAAKVASMGTKRVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKAGNTARTRRSDVIKPVTTESRKPAYLST 347 MALKSSPKGQGKRDTGPKAKRKAPTPSAKAAKVASMGTKRVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKAGNTARTRRSDVIKPVTTESRKPAYLST Sbjct: 1 MALKSSPKGQGKRDTGPKAKRKAPTPSAKAAKVASMGTKRVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKAGNTARTRRSDVIKPVTTESRKPAYLST 347
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|553190064|ref|XP_005855118.1| (brix domain containing 1 [Nannochloropsis gaditana CCMP526] >gi|422293937|gb|EKU21237.1| brix domain containing 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0 Identity = 322/330 (97.58%), Postives = 323/330 (97.88%), Query Frame = 0 Query: 1 MALKSSPKGQGKRDTGPKAKRKAPTPSAKAAKVASMGTKRVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKAGNTARTRRSD 330 MALKSSPKGQGKRDTGPKAKRKAPTPSAKAAKVASMGTKRVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKA R R + Sbjct: 1 MALKSSPKGQGKRDTGPKAKRKAPTPSAKAAKVASMGTKRVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKALRKGRGEREE 330
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|298706105|emb|CBJ29198.1| (brix domain containing 1 [Ectocarpus siliculosus]) HSP 1 Score: 283.493 bits (724), Expect = 3.048e-90 Identity = 131/285 (45.96%), Postives = 192/285 (67.37%), Query Frame = 0 Query: 36 MGTKRVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKA 320 M ++ + PK+ A+ LR + +EP++ E+ K A+ +KG K Q + L+D+ +L P+A S+KN+ P ED TS EFL KNDC+LFCFGSH+KKRP N+++GRT+D H+LDM+E G+ GL + A KR GSKP VF+G+ W ++ ++QNL +DFFR VN+VALAG+D TA D + VR+YH+ F++S ++P+V L+ MGP+ L +RR AA DLW+ + K+P+ +K KN S N G+ +GR+H+GRQDL+SM+V+RVKA Sbjct: 1 MPSRNIIPKQGNAKALRAKRKREPQVHENAKTAIIIKGRKTSQDVTDALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCSLFCFGSHNKKRPNNVVLGRTFDGHMLDMIELGLVQYRGLGEL-AGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLLDFFRGQVVNEVALAGLDHCVVCTA-AQDKVYVRHYHIGFQRSGSKIPSVDLKEMGPSLDLQIRRTSFAAKDLWKASVKKPRVAETRKTKNVSANQFGDKLGRIHLGRQDLSSMKVRRVKA 283
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|397616911|gb|EJK64192.1| (hypothetical protein THAOC_15096 [Thalassiosira oceanica]) HSP 1 Score: 266.544 bits (680), Expect = 8.587e-84 Identity = 144/311 (46.30%), Postives = 195/311 (62.70%), Query Frame = 0 Query: 23 APTP-SAKAAKVASMGTKRVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDV--TSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAM-----GTDS---ILVRNYHVKFKKS-QGRV-PNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKA 320 APTP AK AK + K+PKARV R LK E +LVE GK +L LKG +C + + TVL+D+ + P+AK LS+ N I PF+D SLEFL KND +F SH+KKRP NL++GRT+D+ +LDMVE G+ L KKR GSKP L F GD W D L+R+QNL +DF+R D V+ + L+G+D V FTA+ G ++ I R Y++K K+ QG V P L GP+ +RR Q A+PDLW+ A KQP+G++ KK KN++TNV GET+GR+H+ +QD+ + K+ KA Sbjct: 2 APTPHQAKTAKAKLISGG----KQPKARVARYLKTTESQLVEGGKGSLLLKGIRCSESMSTVLKDMRSVQAPHAKLLSKNNLIVPFDDAGQQSLEFLTTKNDATVFAMASHNKKRPNNLVLGRTFDRRVLDMVEIGILQYRSLSDFGGLPKKRLGSKPLLQFVGDLWSSDVNLKRLQNLMIDFYRGDPVDSLVLSGLDHVIVFTAVEASVGGQEAFPMIHQRTYYMKLKRDPQGGVAPVPYLTPSGPDMDFKIRRTQFASPDLWKLAMKQPQGIKAKKKKNQTTNVFGETIGRLHLDKQDIDNRSGKKSKA 308
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|669150164|ref|XP_008610644.1| (hypothetical protein SDRG_06631 [Saprolegnia diclina VS20] >gi|530737640|gb|EQC35882.1| hypothetical protein SDRG_06631 [Saprolegnia diclina VS20]) HSP 1 Score: 259.61 bits (662), Expect = 2.529e-81 Identity = 139/306 (45.42%), Postives = 188/306 (61.44%), Query Frame = 0 Query: 19 AKRKAPTPSAKAAKVASMGTKRVTP---KKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVL-GETVGRVHVGRQDLTSMRVKRVKA 320 AK AP PS + K TP K+ KA+V R +K K PKLVE+ KQ L L+G K + + +LRDL + P+AK LS++NE+ PF+D S+EFL KND +LF GS +KKRP N+I GRT+D HL+DM+E G + + +D K K GSKPC VFAG+ W +++NLF+D FR V L G+D V +A + +L R+Y + FK S P V L+ MGP F L+ RRH+ + DL + ACK+PK L PKKVKN + + L G+ +GR+HV QD+ SM V+RVKA Sbjct: 9 AKPAAP-PSKAMGAPKKLKGKAATPIKTKRVKAKVARAIKNKAPKLVENTKQLLVLRGNKTNEDVSNLLRDLRMIKAPDAKALSKRNELHPFDDANSVEFLTAKNDTSLFLLGSSTKKRPNNVIFGRTFDGHLMDMIEMGFENFKSIDDFKVKSKMAPGSKPCFVFAGNEWDTIEEYTKLKNLFLDIFRGTITTAVNLKGLDHVIVCSA-AKNRVLFRHYSIDFKLSNDTHPRVELDEMGPRFDLSFRRHKFGSADLMKAACKKPKELAPKKVKNITRDALTGDKIGRIHVEHQDIYSMNVRRVKA 312
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|813142381|ref|XP_012199272.1| (hypothetical protein SPRG_05282 [Saprolegnia parasitica CBS 223.65] >gi|641536195|gb|KDO30091.1| hypothetical protein SPRG_05282 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 259.61 bits (662), Expect = 2.612e-81 Identity = 139/306 (45.42%), Postives = 188/306 (61.44%), Query Frame = 0 Query: 19 AKRKAPTPSAKAAKVASMGTKRVTP---KKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVL-GETVGRVHVGRQDLTSMRVKRVKA 320 AK AP PS + K TP K+ KA+V R +K K PKLVE+ KQ L L+G K + + +LRDL + P+AK LS++NE+ PF+D S+EFL KND +LF GS +KKRP N+I GRT+D HL+DM+E G + + +D K K GSKPC VFAG+ W +++NLF+D FR V L G+D V +A + +L R+Y + FK S P V L+ MGP F L+ RRH+ + DL + ACK+PK L PKKVKN + + L G+ +GR+HV QD+ SM V+RVKA Sbjct: 9 AKPAAP-PSKAMGAPKKLKGKAATPIKTKRVKAKVARAIKNKAPKLVENTKQLLVLRGNKTNEDVTNLLRDLRMIKAPDAKALSKRNELHPFDDANSVEFLTAKNDTSLFLLGSSTKKRPNNVIFGRTFDGHLMDMIEMGFENFKSIDDFKVKSKMAPGSKPCFVFAGNEWDTIEEYTKLKNLFLDIFRGTITTAVNLKGLDHVIVCSA-AKNRVLFRHYSIDFKLSNDTHPRVELDEMGPRFDLSFRRHKFGSADLMKAACKKPKELAPKKVKNITRDALTGDKIGRIHVEHQDIYSMNVRRVKA 312
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|1142968438|gb|AQM32293.1| (putative ribosome production factor 2, partial [Euoplos sp. WAM T129363]) HSP 1 Score: 257.684 bits (657), Expect = 7.135e-81 Identity = 126/277 (45.49%), Postives = 187/277 (67.51%), Query Frame = 0 Query: 45 KPKARV-LRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKA 320 KPK+R R L+ +EPK+VED + +F++G ++ VL+D + L KP + F ++KN++RPFED +SLEF + KND +LF FGS++KKRP N+++GR +D H++DM EFGV + + L+ K K G+KP L+FAG+ + +DAT +R++NL +DFFR + ++ L G++ + F M I +R+Y V FKKS RVP+V+LE MGP+ L +RR +LA DL++ A K P LRPKK KN + LG T GRVH+ RQD + ++ +RVK Sbjct: 1 KPKSRKGKRFLEKREPKVVEDCRTTIFIRGKNANNVVLQVLKDFSLLKKPRSVFFNKKNDMRPFEDASSLEFFSQKNDASLFMFGSNNKKRPNNVVLGRLFDYHVMDMFEFGVENFKTLNDFKIA-KIPIGTKPMLLFAGEMFDKDATYQRLKNLLIDFFRGPVIEQIRLQGLEHIVVFHCMDNGKIQLRSYKVVFKKSGTRVPHVVLEEMGPHMDLVLRRRKLATDDLFKQATKTPDQLRPKKKKNIKRDPLGSTHGRVHMQRQDYSKLKTRRVKG 276
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|673038816|ref|XP_008873369.1| (hypothetical protein H310_09157 [Aphanomyces invadans] >gi|574470799|gb|ETV97808.1| hypothetical protein H310_09157 [Aphanomyces invadans]) HSP 1 Score: 258.07 bits (658), Expect = 1.092e-80 Identity = 131/300 (43.67%), Postives = 189/300 (63.00%), Query Frame = 0 Query: 26 PSAKAAKVASMGTKRVTP----KKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVL-GETVGRVHVGRQDLTSMRVKRVKA 320 P +K V + G K+ P K+ KA V R +K KE KLVE+ KQ L L+G K + + +LRDL + P+AK LS+KNE+ PF+D S+EFL KND +LF GS +KKRP N+I GRT+D H++DM+E G + + +D K K GSKPC +FAG W Q ++++N+ +D FR V + L G+D V +A + +L R+Y + F+ + P V L+ MGP F L+ RRH+ + D+ + ACK+PK L PKKVKN S + L G+ +GR+H+ +QD+ SM+V+RVKA Sbjct: 14 PPSKKKTVPAKGNKKERPVIKAKRQKASVARAVKNKEAKLVENTKQLLVLRGNKTNESVNQLLRDLKMIKAPDAKVLSKKNELHPFDDPNSIEFLTHKNDTSLFVLGSSTKKRPNNIIFGRTFDGHIMDMLEMGFDNFKSIDEFKCKSKMAPGSKPCFLFAGAEWEQSEPYQKLKNVLVDIFRGTIVTAINLKGLDHVIVCSA-ANNRVLFRHYSIAFQLTTDTHPRVELDEMGPRFDLSFRRHKFGSADMMKVACKKPKELAPKKVKNVSRDELTGDKIGRIHLDKQDIYSMQVRRVKA 312
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|1173931485|gb|OQR83878.1| (hypothetical protein ACHHYP_14176 [Achlya hypogyna]) HSP 1 Score: 257.299 bits (656), Expect = 2.006e-80 Identity = 127/282 (45.04%), Postives = 181/282 (64.18%), Query Frame = 0 Query: 40 RVTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVL-GETVGRVHVGRQDLTSMRVKRVKA 320 +++ K+ KA+V R +K KEPKLVE+ KQ L L+G K + + +LRDL + P+AK LS++NE+ PF+D S+EFL KND +LF GS +KKRP N+I GRT+D HL+DM+E G + + +D K K GSKPC VF G+ W ++++N+ +D FR V L G+D V +A + +L R+Y + FK S P V L+ MGP F L+ RR + A+ DL + ACK+PK L PKK+KN + + L G+ +GR+HV QD+ SM V+RVKA Sbjct: 32 KISTKRVKAKVARAIKNKEPKLVENTKQLLVLRGNKTNEDVNHLLRDLRMIKAPDAKVLSKRNELHPFDDANSVEFLTTKNDTSLFLLGSSTKKRPNNVIFGRTFDGHLMDMIELGFENFKSIDDFKVKSKMAPGSKPCFVFEGNEWETIEVYQKLKNILIDMFRGTITTAVNLKGLDHVIVCSA-AKNRVLFRHYSIDFKLSNDTHPRVELDEMGPRFDLSFRRQKFASADLMKAACKKPKELAPKKIKNVTRDELTGDKIGRIHVEHQDIYSMNVRRVKA 312
BLAST of EWM20883.1 vs. NCBI_GenBank
Match: gi|1173955140|gb|OQS02179.1| (hypothetical protein THRCLA_05424 [Thraustotheca clavata]) HSP 1 Score: 257.299 bits (656), Expect = 2.550e-80 Identity = 127/281 (45.20%), Postives = 181/281 (64.41%), Query Frame = 0 Query: 41 VTPKKPKARVLRLLKAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLRPKKVKNESTNVL-GETVGRVHVGRQDLTSMRVKRVKA 320 + PK+ KA+V R +K KEPKLVE+ KQ L L+G K + + +LRDL + P++K L++KNE+ PF+D S+EFL KND +LF GS +KKRP N+I GRT+D HL+DM+E G + + +D K K GSKPC VF+G+ W ++++N+ +D FR V L G+D V +A + +L R+Y + F S P V L+ MGP F L+ RRH+ A+ DL + A K+PK L PKK+KN + + L G+ +GR+HV RQD+ SM V+RVKA Sbjct: 31 IKPKRVKAKVARAIKHKEPKLVENTKQLLVLRGNKTNEDVNNLLRDLRMIKAPDSKSLAKKNELHPFDDANSVEFLTTKNDTSLFLLGSSTKKRPNNIIFGRTFDGHLMDMIEMGFENFKSIDDFKIKSKMAPGSKPCFVFSGNEWETIEEYQKLKNILLDTFRGTITTGVNLKGLDHVIVCSA-AKNRVLFRHYSIAFTLSNDTHPRVELDEMGPRFDLSFRRHKFASADLMKAALKKPKELAPKKIKNVTRDELTGDKIGRIHVDRQDIYSMNVRRVKA 310 The following BLAST results are available for this feature:
BLAST of EWM20883.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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