EWM20906.1, cds9767 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|585100861|gb|EWM20906.1| (Ribosomal protein L7A/L8 [Nannochloropsis gaditana]) HSP 1 Score: 506.523 bits (1303), Expect = 0.000e+0 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0 Query: 1 MAPKKVAKKPAKKAAPKANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255 MAPKKVAKKPAKKAAPKANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF Sbjct: 1 MAPKKVAKKPAKKAAPKANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|299116658|emb|CBN74803.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 317.39 bits (812), Expect = 2.231e-106 Identity = 158/239 (66.11%), Postives = 191/239 (79.92%), Query Frame = 0 Query: 18 ANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQ-TVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255 A+PLF A +SFRIG I+PK DLSRFVKWPRY+R+QRQRKIL QRLKVPP+INQFSKA+DKNQATEL K+L KY+PE K K++RLK++AAAK +G E PAP+K VIK+GLKHVT LIE +K V IAHDV PIELVVW+PALCRK GIPY I+KGKARLG LVH+KNAAV+ L KED++ + + F +FN+ R WGGG+MGLKTQ++LE RQ+A+EAELAKKA + Sbjct: 20 ADPLFPARKKSFRIGRDIQPKV-DLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSKAIDKNQATELLKVLMKYQPEDKKAKQQRLKEIAAAKEAGKE-PAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVTPIELVVWLPALCRKMGIPYCIMKGKARLGTLVHQKNAAVICLTTVNKEDESKLSNLKSNFTAQFNEGFVRKWGGGVMGLKTQRKLEKRQKAIEAELAKKAQY 256
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|301117634|ref|XP_002906545.1| (60S ribosomal protein L7a-2 [Phytophthora infestans T30-4] >gi|262107894|gb|EEY65946.1| 60S ribosomal protein L7a-2 [Phytophthora infestans T30-4]) HSP 1 Score: 311.227 bits (796), Expect = 7.169e-104 Identity = 154/244 (63.11%), Postives = 187/244 (76.64%), Query Frame = 0 Query: 14 AAPKANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKK--ERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255 AA K +PLF A P++FR GG I+PK RDLSRFV+WPRYVR+QRQRK+LYQRLKVPP+INQFS ++KN AT+LFKLL KY+PE+K K +RL+ +AA K PA V+K+GL HVT LIE KK K V IAHDV+PIELVV++PALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + F+ +FND R WGGGIMGLKTQK+LE+R++ + AE AKKA + Sbjct: 26 AASKKDPLFVATPKNFRKGGDIQPK-RDLSRFVRWPRYVRLQRQRKVLYQRLKVPPSINQFSNTVEKNVATDLFKLLLKYQPETKAAKTQRLRNIAAGKEEASAPPA-----VVKFGLNHVTSLIENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLTQVFRTKFNDDSVARRKWGGGIMGLKTQKKLELREKVIAAEAAKKAQY 263
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|669156040|ref|XP_008613582.1| (50S ribosomal protein L7Ae [Saprolegnia diclina VS20] >gi|530734654|gb|EQC32896.1| 50S ribosomal protein L7Ae [Saprolegnia diclina VS20]) HSP 1 Score: 311.227 bits (796), Expect = 7.274e-104 Identity = 155/240 (64.58%), Postives = 184/240 (76.67%), Query Frame = 0 Query: 18 ANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKE--RTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255 A+PLF + P++FR+GG I+PK RDLSRFV+WP+ VR+QRQ KIL RLKVPP+INQF+ LDKN AT+L+KLL KY+PESK K +RL+ +AA K PA VIKYGL HVT LIE KK K V IAHDV PIELVV++PALCRK IPY IVKGKARLG LVHKKNAAVVAL + KEDKA F+ + F+ +FND+ R WGGGIMGLKTQK+LE+R +AV AELAKKA + Sbjct: 33 ADPLFPSAPKNFRLGGDIQPK-RDLSRFVRWPKNVRLQRQHKILTTRLKVPPSINQFTNTLDKNAATDLYKLLLKYQPESKAAKTQRLRDIAAGKEQVSAPPA-----VIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDESTHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 266
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|1173947992|gb|OQR96157.1| (60S ribosomal protein L7a-2 [Achlya hypogyna]) HSP 1 Score: 309.686 bits (792), Expect = 3.394e-103 Identity = 157/247 (63.56%), Postives = 187/247 (75.71%), Query Frame = 0 Query: 14 AAPK---ANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKE--RTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255 APK A+PLF + P++FR+GG I+PK RDLSRFV+WP+ VR+QRQ KIL RLKVPP+INQFS LDKN AT+L+KLL KY+PE+K K +RL+ +AA K PA +IKYGL HVT LIE KK K V IAHDV PIELVV++PALCRK IPY IVKGKARLG LVHKKNAAVVAL + KEDKA F+ + F+ +FND+ R WGGGIMGLKTQK+LE+R +AV AELAKKA + Sbjct: 25 TAPKKKTADPLFPSAPKNFRLGGDIQPK-RDLSRFVRWPKNVRLQRQHKILTTRLKVPPSINQFSNTLDKNTATDLYKLLLKYQPETKAAKTQRLRDIAAGKEQVSAPPA-----LIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDETSHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 265
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|1173955032|gb|OQS02109.1| (60S ribosomal protein L7a-2 [Thraustotheca clavata]) HSP 1 Score: 309.301 bits (791), Expect = 4.554e-103 Identity = 155/240 (64.58%), Postives = 184/240 (76.67%), Query Frame = 0 Query: 18 ANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKE--RTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255 A+PLF + P++FR+GG I+PK RD+SRFV+WP+ VR+QRQ KIL RLKVPP+INQFS LDKN AT+LFKLL KY+PE+K K +RL+ +AA K PA VIKYGL HVT LIE KK K V IAHDV PIELVV++PALCRK IPY IVKGKARLG LVHKKNAAVVAL + KEDKA F+ + F+ +FND+ R WGGGIMGLKTQK+LE+R +AV AELAKKA + Sbjct: 31 ADPLFPSAPKNFRLGGDIQPK-RDVSRFVRWPKNVRLQRQHKILTTRLKVPPSINQFSHTLDKNTATDLFKLLLKYQPETKAAKTQRLRDIAAGKEKVSAPPA-----VIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDETTHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 264
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|635367800|emb|CCI44069.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 307.76 bits (787), Expect = 1.636e-102 Identity = 153/242 (63.22%), Postives = 185/242 (76.45%), Query Frame = 0 Query: 16 PKANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDK--KERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255 PK NPLF + PR+FR+G I+PK RDLSRFV+WP+YV IQRQRKILYQRLKVPP+INQF+ LD++ A +LFKLL KY+PE+K K +RL+ +AA + P P V+KYGL HVT LIE KK K V IAHDVNPIELVV++PALCRK IPYAIVKGK+RLG +VHKKNAAVVAL KEDK F+ + + F+ +FND R WGGGIMGLKTQK+LEIR++ + AE AKKA + Sbjct: 29 PKQNPLFPSTPRNFRLGCDIQPK-RDLSRFVRWPKYVTIQRQRKILYQRLKVPPSINQFTNTLDRHVAADLFKLLLKYQPETKAAKTQRLRNIAAG-TDTLKAPPP----VVKYGLNHVTSLIERKKAKMVVIAHDVNPIELVVFLPALCRKFDIPYAIVKGKSRLGQIVHKKNAAVVALTHINKEDKTKFDNLSSTFRTKFNDDTGSRRKWGGGIMGLKTQKKLEIREKVLAAEAAKKAQY 264
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|695375633|ref|XP_009515589.1| (hypothetical protein PHYSODRAFT_370958, partial [Phytophthora sojae] >gi|348688500|gb|EGZ28314.1| hypothetical protein PHYSODRAFT_370958, partial [Phytophthora sojae]) HSP 1 Score: 304.679 bits (779), Expect = 7.652e-102 Identity = 152/237 (64.14%), Postives = 180/237 (75.95%), Query Frame = 0 Query: 11 AKKAAPKANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDK--KERTWGGGIMGLKTQKRLEIRQRAV 245 A A K NPLF + P++FR GG I+PK RDLSRFV+WPRYVR+QRQRKILYQRLKVPP+INQFS L+KN AT+LFKLL KY+PE+K K RL+ +AA K PA V+K+GL HVT LIE KK K V IAHDV+PIELVV++PALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + FK +FND R WGGGIMGLKTQK+LE+R++A+ Sbjct: 2 AASTASKKNPLFVSTPKNFRKGGDIQPK-RDLSRFVRWPRYVRLQRQRKILYQRLKVPPSINQFSNTLEKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKEEASAPPA-----VVKFGLNHVTSLIENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLSEAFKAKFNDDAVSRRKWGGGIMGLKTQKKLELREKAI 232
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|1214711140|gb|OWZ22172.1| (60S ribosomal protein L7a-2 [Phytophthora megakarya]) HSP 1 Score: 296.204 bits (757), Expect = 6.213e-98 Identity = 146/230 (63.48%), Postives = 175/230 (76.09%), Query Frame = 0 Query: 14 AAPKANPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKK--ERTWGGGIMGLKTQKRLEIR 241 +A K +PLF + P++FR GG I+PK RDLSRFV+WPRYVR+QRQRK+LYQRLKVPP+INQFS +DKN AT+LFKLL KY+PE+K K RL+ +AA K PA V+K+GL HVT LIE KK K V IAHDV+PIELVV++PALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + F +FN+ R WGGGIMGLKTQK+LE+R Sbjct: 25 SASKKDPLFVSAPKNFRKGGDIQPK-RDLSRFVRWPRYVRLQRQRKVLYQRLKVPPSINQFSNTVDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKEEASAPPA-----VVKFGLNHVTSLIENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLTETFHAKFNEDNVARRKWGGGIMGLKTQKKLELR 248
BLAST of EWM20906.1 vs. NCBI_GenBank
Match: gi|953486111|emb|CEG50289.1| (ribosomal protein rpl7a [Plasmopara halstedii]) HSP 1 Score: 296.204 bits (757), Expect = 6.293e-98 Identity = 147/225 (65.33%), Postives = 173/225 (76.89%), Query Frame = 0 Query: 19 NPLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKK--ERTWGGGIMGLKTQKRLEIR 241 NPLFA+ P++FR G I+PK RDLSRFV+WPRYVR+QRQRKILYQRLKVPP+INQFS +DKN AT+LFKLL KY+PE+K K RL+ +AA K PA V+K+GL HVT LIE KK K V IAHDVNPIELVV++PALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + F+ +FN+ R WGGGIMGLKTQK+LE+R Sbjct: 32 NPLFASTPKNFRKGNDIQPK-RDLSRFVRWPRYVRLQRQRKILYQRLKVPPSINQFSNTVDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKQEATAPPA-----VVKFGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLSQVFRAKFNEDSATRRKWGGGIMGLKTQKKLELR 250 The following BLAST results are available for this feature:
BLAST of EWM20906.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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