EWM20899.1, cds9762 (CDS) Nannochloropsis gaditana

Overview
NameEWM20899.1
Unique Namecds9762
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:124697..126853 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20899.1
Productchromosome transmission fidelity
Orig transcript idgnl|cribi|Naga_100156g15.1706.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:124697..126853 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|585100854|gb|EWM20899.1| (chromosome transmission fidelity [Nannochloropsis gaditana])

HSP 1 Score: 1470.29 bits (3805), Expect = 0.000e+0
Identity = 718/718 (100.00%), Postives = 718/718 (100.00%), Query Frame = 0
Query:    1 MWGGQGGGSSQAGHDGTGQELPGRRTGKSDPDFGDTDLSFQRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSNGLPSKAAASCEATPGPNIAPLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
            MWGGQGGGSSQAGHDGTGQELPGRRTGKSDPDFGDTDLSFQRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSNGLPSKAAASCEATPGPNIAPLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI
Sbjct:    1 MWGGQGGGSSQAGHDGTGQELPGRRTGKSDPDFGDTDLSFQRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSNGLPSKAAASCEATPGPNIAPLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|298708269|emb|CBJ48332.1| (similar to CTF18, chromosome transmission fidelity factor 18 homolog isoform 3 [Ectocarpus siliculosus])

HSP 1 Score: 351.673 bits (901), Expect = 1.285e-103
Identity = 197/464 (42.46%), Postives = 274/464 (59.05%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNP-RLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGLHVMEDLHLATAAA-LHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISY 505
            D+RPE  AR I+L GPPG+GKTTLA V+A+H GYR  EINASDDR+A  LR++MT AM+   +L DKRPN I+LDE DG +GKAA +++V+I  APL      + G K      S          LTRPL+ ICND + PALR +R +A VF FR +++P RL+QRLK IC +E L V   AL+ L + S  DVRSCL+TLQF   R  +  ++                   S  LL  V EG+KD+ +D+ +V +S+F +  S  T     L GE+G+  +       R    V   V +++DH+ VL    EN+  +RF DP+L+K   A +WL  +DL+  R  +        +   AAA +H LCR + R  +  P+KD+E R+AR ++ +IL SF +G  L A   R    +VLD++S LM IL P+LRP+NPDL S  E+A  R LV +LL+CG+++
Sbjct:  394 DKRPE--ARIIMLCGPPGLGKTTLAQVVAKHAGYRVYEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEVDGADGKAAAQVLVDIATAPLAKATAATGGGKKGKRRTS----------LTRPLVLICNDQWTPALRPIRAIAQVFVFRAKSSPARLVQRLKAICTSERLTVNTDALTRLADRSHLDVRSCLHTLQFVARRASSGSVTNA-----------------SAALLTAVAEGIKDERRDLFEVLRSVFTRKKS-GTKRRLFLGGEQGSMAD-------RKDAEVFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKAAAAMDWLEMADLMDTRTNQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTARAAKSNILHSFADGRQLGAT-GRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRDLVGILLSCGLTF 819          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|971513262|dbj|GAQ84926.1| (DNA replication checkpoint protein CHL12/CTF18 [Klebsormidium nitens])

HSP 1 Score: 281.182 bits (718), Expect = 2.341e-78
Identity = 185/509 (36.35%), Postives = 270/509 (53.05%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEAD----GIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADG-----SVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDL----VHGRQMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILN-PSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEF 538
            D RPE   + +LL G PG+GKTTLAHV A HCGYR +E+NASDDRSA +L++++  A+Q Q V+GD+RPNC+++DE D    G EGK A+  ++ I+ A   S  + S    DEAGG+  A         +   L+RP+ICICND+Y PALR LR+VA VF F      RL  RLK IC  E    +  AL+ LCE +  DVR+CLNTLQF   R  A  L+                  +S Q++     G KD   ++ ++   LF++  SKA    AL       GT  R  +  ++  R+   ++ Y +H  V+    EN+ ++R+ + +L K +   EW+  S+L    VH RQ   L   +    AT  A+  L     RP +  P+  +++R+   S++ +LQS+             P+ ++ D+VSPL+ I+  P+LRPV   L S  EK  +  LVD ++  G +Y    G G+     + GA  +L+  PAL  LA F
Sbjct:  398 DGRPE--QKVLLLCGAPGLGKTTLAHVAAHHCGYRVVEVNASDDRSANSLKQRILDAVQMQPVMGDRRPNCLVIDEIDGALNGAEGKGAIDALLAIVNA-GASGSRDSDKDADEAGGNHLAPSKKKKKKGAVKKLSRPVICICNDMYAPALRQLRQVAKVFVFAPPAPSRLATRLKFICTKEGYSADTRALTALCEHTECDVRACLNTLQFLHRRGKALRLAD-----------------ISSQVV-----GRKDMTHNVFEIWTELFQRKKSKAGTGTALSGSPAMQGTMTR-NAEQQEFHRIQNLLSGYGEHDFVMEGVHENFLRMRYHEGTLQKTVECLEWMGDSELMSRRVHSRQHFFLMAYQP---ATLQAVRRLIANPERPHIEFPKTYNKFRADHSSQRQLLQSWQMEMDPGVARGLNPSAIIRDLVSPLLDIVAPPTLRPVASQLLSEKEKGEVSELVDTMIGYGFTYKLQTGFGV-----NPGAGPQLD--PALGRLAAF 870          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|568026874|gb|ETM00845.1| (hypothetical protein L917_02478 [Phytophthora parasitica])

HSP 1 Score: 271.937 bits (694), Expect = 2.487e-77
Identity = 201/686 (29.30%), Postives = 329/686 (47.96%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGI----EGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQF--FQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGR-QMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSN--GLPSKAAASCEATPGPNIAPLVAKEE--EEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
            D    P  + IL+ GPPG GKTTLA+++A H GY P+E+NASDDR+A  LR K+  AM+ Q++ G+++PNCIILDE DG     +GK+A+++I  I+ APL+  +K +A        H          PLTRPLICICNDLY   LR LR++A +F      + RL+ RLK IC+ E +      L+ LC ++ +D+R CLNTLQF   Q+R  +AV++   G            +H             KD    M +    +F +  SK+                  A+  V  T+++  + AS  +   ++    EN  ++ F DP++ K+    EWL  +D    R + E  +  +      A A H  C   +R R+  PR   E +  R   ++IL +  EG  LQ +     + +V+DV+  L+  L+P++R +N  L +  EK  ++ L+ ++ + G+S+         H ++  G+ E   + PAL  L EF  +++G  A +S            +LP  V+ +  +E +LE +RR E  K+     +    +ST +  +S+   +  KAA +    P  + A L  K+E   +  P A+  +   ++   +  ++                      F  +    A   S VR+K+  GYT  ++  VY++D++
Sbjct:  115 DEDKRPFNKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVNAPLQ--RKKAAAKTAAKNRH----------PLTRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKYICRHEGIKASTGVLATLCSSADNDIRYCLNTLQFQTTQSRGKSAVVTLSTG----------LVAH-------------KDHVHGMFEALDLVFYEARSKS------------------AKGDVPVTEKIDEAAASLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYEYRARSEQQYAFQAYIPFAAIATHAACCTSSRRRVEYPRAQFEAQKRRDRSENILTALTEGAQLQPILRMSTSVLVVDVIPWLVASLSPNIRRINLSLQTKEEKLMIQRLIQLMASLGLSF--------RHKYRPDGS-EDYALEPALNELVEFR-SSEGGAAYQS------------MLPMAVRKMIAREVELEQMRRNE--KSSPSTKQNNSKASTVKVDKSSEATIEEKAAKAAYVLPELSEAELAKKDEALRKRNPFAFAHREAKRKRDEELNAK----------------------FKQQRTNDAHAHSMVRYKFNEGYTCGIKTAVYVRDLL 701          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|567969261|gb|ETK94357.1| (hypothetical protein L915_02569 [Phytophthora parasitica])

HSP 1 Score: 273.478 bits (698), Expect = 1.861e-76
Identity = 201/686 (29.30%), Postives = 329/686 (47.96%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGI----EGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQF--FQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGR-QMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSN--GLPSKAAASCEATPGPNIAPLVAKEE--EEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
            D    P  + IL+ GPPG GKTTLA+++A H GY P+E+NASDDR+A  LR K+  AM+ Q++ G+++PNCIILDE DG     +GK+A+++I  I+ APL+  +K +A        H          PLTRPLICICNDLY   LR LR++A +F      + RL+ RLK IC+ E +      L+ LC ++ +D+R CLNTLQF   Q+R  +AV++   G            +H             KD    M +    +F +  SK+                  A+  V  T+++  + AS  +   ++    EN  ++ F DP++ K+    EWL  +D    R + E  +  +      A A H  C   +R R+  PR   E +  R   ++IL +  EG  LQ +     + +V+DV+  L+  L+P++R +N  L +  EK  ++ L+ ++ + G+S+         H ++  G+ E   + PAL  L EF  +++G  A +S            +LP  V+ +  +E +LE +RR E  K+     +    +ST +  +S+   +  KAA +    P  + A L  K+E   +  P A+  +   ++   +  ++                      F  +    A   S VR+K+  GYT  ++  VY++D++
Sbjct:  300 DEDKRPFNKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVNAPLQ--RKKAAAKTAAKNRH----------PLTRPLICICNDLYASVLRPLRQMAKIFTLDASHSQRLVTRLKYICRHEGIKASTGVLATLCSSADNDIRYCLNTLQFQTTQSRGKSAVVTLSTG----------LVAH-------------KDHVHGMFEALDLVFYEARSKS------------------AKGDVPVTEKIDEAAASLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYEYRARSEQQYAFQAYIPFAAIATHAACCTSSRRRVEYPRAQFEAQKRRDRSENILTALTEGAQLQPILRMSTSVLVVDVIPWLVASLSPNIRRINLSLQTKEEKLMIQRLIQLMASLGLSF--------RHKYRPDGS-EDYALEPALNELVEFR-SSEGGAAYQS------------MLPMAVRKMIAREVELEQMRRNE--KSSPSTKQNNSKASTVKVDKSSEATIEEKAAKAAYVLPELSEAELAKKDEALRKRNPFAFAHREAKRKRDEELNAK----------------------FKQQRTNDAHAHSMVRYKFNEGYTCGIKTAVYVRDLL 886          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|566031576|gb|ETI54487.1| (hypothetical protein F443_02694 [Phytophthora parasitica P1569] >gi|570335290|gb|ETO83238.1| hypothetical protein F444_02697 [Phytophthora parasitica P1976])

HSP 1 Score: 272.707 bits (696), Expect = 3.023e-76
Identity = 201/686 (29.30%), Postives = 329/686 (47.96%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGI----EGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQF--FQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGR-QMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSN--GLPSKAAASCEATPGPNIAPLVAKEE--EEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
            D    P  + IL+ GPPG GKTTLA+++A H GY P+E+NASDDR+A  LR K+  AM+ Q++ G+++PNCIILDE DG     +GK+A+++I  I+ APL+  +K +A        H          PLTRPLICICNDLY   LR LR++A +F      + RL+ RLK IC+ E +      L+ LC ++ +D+R CLNTLQF   Q+R  +AV++   G            +H             KD    M +    +F +  SK+                  A+  V  T+++  + AS  +   ++    EN  ++ F DP++ K+    EWL  +D    R + E  +  +      A A H  C   +R R+  PR   E +  R   ++IL +  EG  LQ +     + +V+DV+  L+  L+P++R +N  L +  EK  ++ L+ ++ + G+S+         H ++  G+ E   + PAL  L EF  +++G  A +S            +LP  V+ +  +E +LE +RR E  K+     +    +ST +  +S+   +  KAA +    P  + A L  K+E   +  P A+  +   ++   +  ++                      F  +    A   S VR+K+  GYT  ++  VY++D++
Sbjct:  300 DEDKRPFNKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVNAPLQ--RKKAAAKTAAKNRH----------PLTRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKYICRHEGIKASTGVLATLCSSADNDIRYCLNTLQFQTTQSRGKSAVVTLSTG----------LVAH-------------KDHVHGMFEALDLVFYEARSKS------------------AKGDVPVTEKIDEAAASLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYEYRARSEQQYAFQAYIPFAAIATHAACCTSSRRRVEYPRAQFEAQKRRDRSENILTALTEGAQLQPILRMSTSVLVVDVIPWLVASLSPNIRRINLSLQTKEEKLMIQRLIQLMASLGLSF--------RHKYRPDGS-EDYALEPALNELVEFR-SSEGGAAYQS------------MLPMAVRKMIAREVELEQMRRNE--KSSPSTKQNNSKASTVKVDKSSEATIEEKAAKAAYVLPELSEAELAKKDEALRKRNPFAFAHREAKRKRDEELNAK----------------------FKQQRTNDAHAHSMVRYKFNEGYTCGIKTAVYVRDLL 886          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|675214239|ref|XP_008916004.1| (hypothetical protein PPTG_19356 [Phytophthora parasitica INRA-310] >gi|567997654|gb|ETL47733.1| hypothetical protein L916_02542 [Phytophthora parasitica] >gi|568057357|gb|ETM54027.1| hypothetical protein L914_02564 [Phytophthora parasitica] >gi|568083696|gb|ETM98658.1| hypothetical protein PPTG_19356 [Phytophthora parasitica INRA-310] >gi|570959334|gb|ETP24313.1| hypothetical protein F441_02655 [Phytophthora parasitica CJ01A1] >gi|570995461|gb|ETP52299.1| hypothetical protein F442_02658 [Phytophthora parasitica P10297] >gi|970630930|gb|KUF77729.1| Chromosome transmission fidelity protein 18 [Phytophthora nicotianae])

HSP 1 Score: 272.322 bits (695), Expect = 4.178e-76
Identity = 201/686 (29.30%), Postives = 329/686 (47.96%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGI----EGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQF--FQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGR-QMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSN--GLPSKAAASCEATPGPNIAPLVAKEE--EEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
            D    P  + IL+ GPPG GKTTLA+++A H GY P+E+NASDDR+A  LR K+  AM+ Q++ G+++PNCIILDE DG     +GK+A+++I  I+ APL+  +K +A        H          PLTRPLICICNDLY   LR LR++A +F      + RL+ RLK IC+ E +      L+ LC ++ +D+R CLNTLQF   Q+R  +AV++   G            +H             KD    M +    +F +  SK+                  A+  V  T+++  + AS  +   ++    EN  ++ F DP++ K+    EWL  +D    R + E  +  +      A A H  C   +R R+  PR   E +  R   ++IL +  EG  LQ +     + +V+DV+  L+  L+P++R +N  L +  EK  ++ L+ ++ + G+S+         H ++  G+ E   + PAL  L EF  +++G  A +S            +LP  V+ +  +E +LE +RR E  K+     +    +ST +  +S+   +  KAA +    P  + A L  K+E   +  P A+  +   ++   +  ++                      F  +    A   S VR+K+  GYT  ++  VY++D++
Sbjct:  300 DEDKRPFNKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVNAPLQ--RKKAAAKTAAKNRH----------PLTRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKYICRHEGIKASTGVLATLCSSADNDIRYCLNTLQFQTTQSRGKSAVVTLSTG----------LVAH-------------KDHVHGMFEALDLVFYEARSKS------------------AKGDVPVTEKIDEAAASLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYEYRARSEQQYAFQAYIPFAAIATHAACCTSSRRRVEYPRAQFEAQKRRDRSENILTALTEGAQLQPILRMSTSVLVVDVIPWLVASLSPNIRRINLSLQTKEEKLMIQRLIQLMASLGLSF--------RHKYRPDGS-EDYALEPALNELVEFR-SSEGGAAYQS------------MLPMAVRKMIAREVELEQMRRNE--KSSPSTKQNNSKASTVKVDKSSEATIEEKAAKAAYVLPELSEAELAKKDEALRKRNPFAFAHREAKRKRDEELNAK----------------------FKQQRTNDAHAHSMVRYKFNEGYTCGIKTAVYVRDLL 886          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|695412673|ref|XP_009525797.1| (hypothetical protein PHYSODRAFT_300088 [Phytophthora sojae] >gi|348676922|gb|EGZ16739.1| hypothetical protein PHYSODRAFT_300088 [Phytophthora sojae])

HSP 1 Score: 273.863 bits (699), Expect = 1.913e-75
Identity = 181/547 (33.09%), Postives = 274/547 (50.09%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGI----EGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGR-QMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTE 585
            D    P  + ILL GPPG GKTTLA+++A H GY P+E+NASDDR+A  LR K+  AM+ Q++ G+++PNCIILDE DG     +GK+A+++I+ I  APL   Q+   G+K  A             PLTRPLICICNDLY   LR LR++A +F      + RL+ RLK IC+ E +     AL+ LC ++ +D+R CLNTLQF   +   AV           K  +A  + L+  L+       KD    M +    +F +  SK+        GE  A            T+++  +V S  +   ++    EN  ++ F DP++ K+    EWL  +D    R + E   V +      A A H  C   +R R+  PR   E +  R   ++IL +  EG  LQ +       +V+DVV  L+  L+P++R +NP L +  EK  ++ L++++ + G+S+         H +   G+ E   + PAL  L EF   +DG                  +LP  V+ +  +E +LE +RR+E
Sbjct:  306 DEDKRPFNKIILLCGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKLISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVILEIANAPL---QRKKTGAKTTAKNRH---------PLTRPLICICNDLYASVLRPLRQMAKIFTLDTPHSQRLVTRLKYICRHEGIKASTGALAALCSSADNDIRYCLNTLQFQSTQSRRAV-----------KDKSAIVT-LTTGLV-----AQKDHVHGMFEAMDLVFFEARSKSAK------GERPA------------TEKIEEAVVSLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYENRARSEQQFVFQAYIPFAAIATHAACCTSSRRRVEYPRAQFELQKKRDRSENILVALAEGAQLQPILRMSTNVLVVDVVPWLVASLSPNIRRINPSLQTKEEKVMIQRLIELMASLGLSF--------RHKYLPDGS-EDYSLEPALNELVEFRGNDDGAVYQS-------------MLPLTVRKMIAREVELEQMRRSE 783          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|301095569|ref|XP_002896884.1| (chromosome transmission fidelity protein, putative [Phytophthora infestans T30-4] >gi|262108531|gb|EEY66583.1| chromosome transmission fidelity protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 269.626 bits (688), Expect = 4.513e-75
Identity = 201/683 (29.43%), Postives = 319/683 (46.71%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGI----EGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGR-QMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSNG-LPSKAAASCEATPGPNIAPLVAKEE--EEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
            D    P  + IL+ GPPG GKTTLA+++A H GY P+E+NASDDR+A  LR K+  AM+ Q++ G+++PNCIILDE DG     +GK+ +++I  I+ APL            E         + +  PLTRPLICICNDLY   LR LR++A +F      + RL+ RLK IC+ E +     AL+ LC ++ +D+R CLNTLQF               Q  Q +     A+ LS  L+       KD    M +V   +F +  S +                  A+  V   +++  +VAS  +   ++    EN  ++ F DP++ K+    EWL  +     R + E  +  +      A A H  C   +R R+  PR   E +  R   ++IL +  EG  LQ L    P+ +V+DVV  L+  L+P++R +NP L +  EK  ++ L+ ++ + G+S+         H ++  G+ E   + PAL  L EF     GT        P Q      +LP  V+ +  +E +LE +RR E + + ++K     S +      S   +  KAA +    P  +   LV K+E   +  P A+  +   ++   +  ++ +                       +    A K S V +K+  GYT  ++  VY+ D++
Sbjct:  295 DEDKRPFNKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTAPVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSGIEVIQEIVNAPL------------ERKKAGAKTAAKNRHPLTRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKCICRHEGIRASTGALATLCSSADNDIRYCLNTLQF---------------QTTQSRGKTGVAT-LSTGLV-----AQKDHAHGMFEVLDLVFYETRSNS------------------AKREVPVAEKIDEAVASLGNFPLLISGLDENVPKMIFNDPTMNKICDVFEWLGLAAEYEYRARSEQQYAFQAYIPFAAIATHASCCTSSRRRVEYPRGQFEAQKRRDRSENILTALTEGAQLQPLLRMSPSVLVVDVVPWLVASLSPNIRRINPSLQTKEEKLMIQRLIQLMASLGLSF--------RHKYRPDGS-EDYALEPALNELVEFRSREGGT--------PYQ-----YMLPISVRKMIAREVELEQMRRNE-KSSPSVKQNNSKSPAVAVDKSSEATIEEKAAKAAYVLPELSDVELVKKDEALRKRNPFAFAHREAKRKRDEELNAKLKL----------------------QRTNDAHKHSRVHYKFNEGYTCGIKTAVYISDLL 881          
BLAST of EWM20899.1 vs. NCBI_GenBank
Match: gi|915539339|ref|XP_013223104.1| (chromosome transmission fidelity protein 18 homolog [Columba livia])

HSP 1 Score: 266.544 bits (680), Expect = 7.278e-74
Identity = 216/693 (31.17%), Postives = 313/693 (45.17%), Query Frame = 0
Query:   44 DRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLG-DKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKP---ASKATATPALLPGEEGAGTEERAQ--------SRVRDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDL-----VHGRQMEGLHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSNGLPSKAAASCEATPGPNIAPLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQ-SAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
            D+   P  +  LL GPPG+GKTTLAHVIA+H GY  +E+NASDDRS    + ++  A Q ++VLG +++PNC+I+DE DG    A++ M++NII       QK + G   EA    G         L RP+ICICND YVPALR LR+ + +  F R    RL+QRL  I   + +  +  AL  LCE + +D+RSC+NTLQF            G+GQ+E           L+ Q+++ +  GLKDQ K +  + Q +F+ P     +    PA LP +   G E+ A            +    V+    S  +H  +     EN+  ++  D SL  V  A EWL FSDL     +H +  + L  +  L      A HLL    + PRLA P   HE  +     Q+++ S   G    A         +L+V+  L+ I+ P LRPVN  LYS  EK  L  L+  +LA  ++Y Q        P  H G                + L  +     +   LP     PPR L    K L  +E +LE +RRTE     AL   + +    G G    G P+   A                  E P  + W   +  + +  + K  T   G P+                 E +   A  +S V F++  G +NAVRR +Y++D++
Sbjct:  297 DQHKRPKYKVALLCGPPGLGKTTLAHVIAKHAGYNAVEMNASDDRSPEVFKTRIEAATQMKSVLGANEKPNCLIIDEIDGAP-TASINMLLNIIN------QKDAEG---EAAAGVGRRRRREGGLLLRPIICICNDQYVPALRPLRQQSFLLTFPRTAPSRLVQRLCEIALRQGMRADTGALLALCEKTENDIRSCINTLQFL----------HGRGQKE-----------LNVQMVQTMKIGLKDQNKGLFSIWQEIFQLPRVQRHRIGMDPA-LPTQLLVGDEDLAHLGGTAGFNVSSQRFHHVLHLATSSGEHEKLAQGLYENFLNMKQRDSSLGSVCLALEWLGFSDLLGQAVLHRQSFQLLRYLPFL----PVAFHLLFAATSVPRLAYPSSQHEALAKLNHMQNLVMSMMLGIMPSARSRTGQQSFILEVLCLLLDIIAPKLRPVNTQLYSLKEKQQLAELISTMLAYNLTYRQE-----RLPEGHYG----------------YKLDPNVEAVCRFPDLPAP---PPRQLSYQAKQLIAREIELEKMRRTE-----ALLQARNLGQEPGNGLGEAGDPADGGA------------------EPPNHQQWLEHIVRRAAAGEDKPETDFFGRPIQRVAAAPAPQASKEESIESQMGKAVGRSDVWFRFNEGVSNAVRRNIYIRDLL 906          
The following BLAST results are available for this feature:
BLAST of EWM20899.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100854|gb|EWM20899.1|0.000e+0100.00chromosome transmission fidelity [Nannochloropsis ... [more]
gi|298708269|emb|CBJ48332.1|1.285e-10342.46similar to CTF18, chromosome transmission fidelity... [more]
gi|971513262|dbj|GAQ84926.1|2.341e-7836.35DNA replication checkpoint protein CHL12/CTF18 [Kl... [more]
gi|568026874|gb|ETM00845.1|2.487e-7729.30hypothetical protein L917_02478 [Phytophthora para... [more]
gi|567969261|gb|ETK94357.1|1.861e-7629.30hypothetical protein L915_02569 [Phytophthora para... [more]
gi|566031576|gb|ETI54487.1|3.023e-7629.30hypothetical protein F443_02694 [Phytophthora para... [more]
gi|675214239|ref|XP_008916004.1|4.178e-7629.30hypothetical protein PPTG_19356 [Phytophthora para... [more]
gi|695412673|ref|XP_009525797.1|1.913e-7533.09hypothetical protein PHYSODRAFT_300088 [Phytophtho... [more]
gi|301095569|ref|XP_002896884.1|4.513e-7529.43chromosome transmission fidelity protein, putative... [more]
gi|915539339|ref|XP_013223104.1|7.278e-7431.17chromosome transmission fidelity protein 18 homolo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9793rna9793Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications