EWM20914.1, cds9761 (CDS) Nannochloropsis gaditana

Overview
NameEWM20914.1
Unique Namecds9761
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:118984..119089 +
Alignment locationKK037256.1:119181..119231 +
Alignment locationKK037256.1:119365..119498 +
Alignment locationKK037256.1:119617..119739 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20914.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100061g1.8547.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:118984..119089 +
KK037256.1supercontigKK037256.1:119181..119231 +
KK037256.1supercontigKK037256.1:119365..119498 +
KK037256.1supercontigKK037256.1:119617..119739 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20914.1 vs. NCBI_GenBank
Match: gi|585100870|gb|EWM20914.1| (hypothetical protein Naga_100061g1 [Nannochloropsis gaditana])

HSP 1 Score: 286.574 bits (732), Expect = 4.779e-98
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 
Query:    1 MLVWRAISHREVVDAINAFDNRGRQVRVWERYMLILGCRGTLGLQNNIVIQETFRTCNTRQALKSRILNSSECYALHGENGEQTRLHPERNCCIFIYFKAKPSMVFIVMRFETRYAVITSACCELVASCHFFLDQEG 137
            MLVWRAISHREVVDAINAFDNRGRQVRVWERYMLILGCRGTLGLQNNIVIQETFRTCNTRQALKSRILNSSECYALHGENGEQTRLHPERNCCIFIYFKAKPSMVFIVMRFETRYAVITSACCELVASCHFFLDQEG
Sbjct:    1 MLVWRAISHREVVDAINAFDNRGRQVRVWERYMLILGCRGTLGLQNNIVIQETFRTCNTRQALKSRILNSSECYALHGENGEQTRLHPERNCCIFIYFKAKPSMVFIVMRFETRYAVITSACCELVASCHFFLDQEG 137
The following BLAST results are available for this feature:
BLAST of EWM20914.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100870|gb|EWM20914.1|4.779e-98100.00hypothetical protein Naga_100061g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9792rna9792Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications