EWM20940.1, cds9759 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|585100896|gb|EWM20940.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1223.38 bits (3164), Expect = 0.000e+0 Identity = 619/619 (100.00%), Postives = 619/619 (100.00%), Query Frame = 0 Query: 1 MSAPKLSNTTHGLHSQNARAPRPVSSFRADRGAPGPGLPPPPPPSPSGSSQKLLPTRQSVDKGGNGVTEGGEGKDSLCGDTHEAHAAPAAGPTSRSNQHSFQYTPAASTSDATSCELSPSVPGHYSQPSTLAVSAGSAGSHQRPPSQSPQGANETAHPPNYPLSTHLPEHESNTSRPLSSDAASEYGDGPGGARTESGMWPMPPSGTVGVKRRRESVRGRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAKARGMAGMTHAGGMALDSEGSGMLLGSEEPSGDGAGSVRRLHGVPSLPTGAHHRHPRGQEVPSPGTYTAFSRGGGPHDVSLAYAHYGLAQHGQMRSGLGLPDPYPAYAPYPLQAPTPAPPQQVLPRAEEAALRREVGKVLVKLKARREAMLVAGGDREQRPRFERSGGDKWGEADEGETTPGARGALAGPRPGVASGREGAGREEPGQQERVWRYDDGQRGGFGATGQEGPYGGRGQDPRPPGASHSAFGRGEGLKTTEPASFAHGGAPPLSLGQLSSNDPRQPPQGASARPRSASSSCTLLPASIPSSFSSAPPLCTGESVATEREEEKEGQTDEDMGPEEATGVGPRRVE 619 MSAPKLSNTTHGLHSQNARAPRPVSSFRADRGAPGPGLPPPPPPSPSGSSQKLLPTRQSVDKGGNGVTEGGEGKDSLCGDTHEAHAAPAAGPTSRSNQHSFQYTPAASTSDATSCELSPSVPGHYSQPSTLAVSAGSAGSHQRPPSQSPQGANETAHPPNYPLSTHLPEHESNTSRPLSSDAASEYGDGPGGARTESGMWPMPPSGTVGVKRRRESVRGRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAKARGMAGMTHAGGMALDSEGSGMLLGSEEPSGDGAGSVRRLHGVPSLPTGAHHRHPRGQEVPSPGTYTAFSRGGGPHDVSLAYAHYGLAQHGQMRSGLGLPDPYPAYAPYPLQAPTPAPPQQVLPRAEEAALRREVGKVLVKLKARREAMLVAGGDREQRPRFERSGGDKWGEADEGETTPGARGALAGPRPGVASGREGAGREEPGQQERVWRYDDGQRGGFGATGQEGPYGGRGQDPRPPGASHSAFGRGEGLKTTEPASFAHGGAPPLSLGQLSSNDPRQPPQGASARPRSASSSCTLLPASIPSSFSSAPPLCTGESVATEREEEKEGQTDEDMGPEEATGVGPRRVE Sbjct: 1 MSAPKLSNTTHGLHSQNARAPRPVSSFRADRGAPGPGLPPPPPPSPSGSSQKLLPTRQSVDKGGNGVTEGGEGKDSLCGDTHEAHAAPAAGPTSRSNQHSFQYTPAASTSDATSCELSPSVPGHYSQPSTLAVSAGSAGSHQRPPSQSPQGANETAHPPNYPLSTHLPEHESNTSRPLSSDAASEYGDGPGGARTESGMWPMPPSGTVGVKRRRESVRGRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAKARGMAGMTHAGGMALDSEGSGMLLGSEEPSGDGAGSVRRLHGVPSLPTGAHHRHPRGQEVPSPGTYTAFSRGGGPHDVSLAYAHYGLAQHGQMRSGLGLPDPYPAYAPYPLQAPTPAPPQQVLPRAEEAALRREVGKVLVKLKARREAMLVAGGDREQRPRFERSGGDKWGEADEGETTPGARGALAGPRPGVASGREGAGREEPGQQERVWRYDDGQRGGFGATGQEGPYGGRGQDPRPPGASHSAFGRGEGLKTTEPASFAHGGAPPLSLGQLSSNDPRQPPQGASARPRSASSSCTLLPASIPSSFSSAPPLCTGESVATEREEEKEGQTDEDMGPEEATGVGPRRVE 619
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|813127013|ref|XP_012197209.1| (hypothetical protein SPRG_03236 [Saprolegnia parasitica CBS 223.65] >gi|641538185|gb|KDO32019.1| hypothetical protein SPRG_03236 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 97.8265 bits (242), Expect = 1.017e-19 Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAKARGM 272 GRWT EEHE+FL GL +YGREWKRVA+ IKTR+SAQIRSHAQKYFAKLAK M Sbjct: 39 GRWTDEEHESFLLGLNLYGREWKRVASKIKTRTSAQIRSHAQKYFAKLAKDAEM 92
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|669142436|ref|XP_008606780.1| (hypothetical protein SDRG_02947 [Saprolegnia diclina VS20] >gi|530741266|gb|EQC39508.1| hypothetical protein SDRG_02947 [Saprolegnia diclina VS20]) HSP 1 Score: 98.5969 bits (244), Expect = 1.991e-19 Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAKARGM 272 GRWT EEHE+FL GL +YGREWKRVA+ IKTR+SAQIRSHAQKYFAKLAK M Sbjct: 38 GRWTDEEHESFLLGLNLYGREWKRVASKIKTRTSAQIRSHAQKYFAKLAKDAEM 91
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|1173943129|gb|OQR92021.1| (hypothetical protein ACHHYP_04136 [Achlya hypogyna]) HSP 1 Score: 97.4413 bits (241), Expect = 2.369e-19 Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAKARGM 272 GRWT EEHE+FL+GL +YGREWKRVA+ IKTR+SAQIRSHAQKYFAKLAK M Sbjct: 21 GRWTDEEHESFLQGLHLYGREWKRVASKIKTRTSAQIRSHAQKYFAKLAKDAEM 74
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|970638623|gb|KUF82046.1| (LHY protein [Phytophthora nicotianae] >gi|970639070|gb|KUF82319.1| LHY protein [Phytophthora nicotianae] >gi|970652386|gb|KUF91058.1| Myosin protein [Phytophthora nicotianae]) HSP 1 Score: 98.9821 bits (245), Expect = 9.751e-19 Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAKARGM-----AGMTHAGGMALDSE-GSGMLLGSEEPSGDGAGSVRRL-HG 310 GRWT +EH++FL GLR+YGREWK+VAA IKTR+SAQIRSHAQKYFAKLA+ M M +G + S+ GS + S + G+GA + R++ HG Sbjct: 99 GRWTEQEHQSFLAGLRLYGREWKKVAAKIKTRTSAQIRSHAQKYFAKLARDDEMRKHSGLSMVMSGPVGYFSDGGSSVAQNSGDEDGEGADASRQMAHG 197
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|673045547|ref|XP_008876734.1| (hypothetical protein H310_11744 [Aphanomyces invadans] >gi|574467767|gb|ETV94789.1| hypothetical protein H310_11744 [Aphanomyces invadans]) HSP 1 Score: 91.6633 bits (226), Expect = 5.174e-18 Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAK 268 GRWT EEHE+FL GL+ +GREWK+VAA IKTR+SAQIRSHAQKYFAKLAK Sbjct: 21 GRWTDEEHESFLAGLQEHGREWKKVAAKIKTRTSAQIRSHAQKYFAKLAK 70
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|695416917|ref|XP_009526968.1| (hypothetical protein PHYSODRAFT_373030, partial [Phytophthora sojae] >gi|348678093|gb|EGZ17910.1| hypothetical protein PHYSODRAFT_373030, partial [Phytophthora sojae]) HSP 1 Score: 87.4261 bits (215), Expect = 7.700e-18 Identity = 40/50 (80.00%), Postives = 47/50 (94.00%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAK 268 GRWT +EH++FL GLR+YGREWK+VAA IKTR+SAQIRSHAQKYFAKLA+ Sbjct: 4 GRWTEQEHQSFLAGLRLYGREWKKVAAKIKTRTSAQIRSHAQKYFAKLAR 53
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|698810678|ref|XP_009838368.1| (hypothetical protein H257_12759 [Aphanomyces astaci] >gi|574106408|gb|ETV71925.1| hypothetical protein H257_12759 [Aphanomyces astaci]) HSP 1 Score: 90.8929 bits (224), Expect = 1.212e-17 Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAKARG--MAGMTHAGGMA-LDSEGS 288 GRWT EEHE FL GL +GREWK+VA+ IKTR+SAQIRSHAQKYFAKLAK G M ++ G ++ +DS S Sbjct: 24 GRWTDEEHERFLAGLTEHGREWKKVASKIKTRTSAQIRSHAQKYFAKLAKDSGGTMDSLSDDGNLSDMDSWCS 96
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|953491162|emb|CEG46021.1| (myb-like dna-binding shaqkyf class family protein [Plasmopara halstedii]) HSP 1 Score: 94.3597 bits (233), Expect = 2.328e-17 Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAK 268 GRWT +EH++FL GLR+YGREWK+VAA IKTR+SAQIRSHAQKYFAKL + Sbjct: 93 GRWTDQEHQSFLAGLRLYGREWKKVAAKIKTRTSAQIRSHAQKYFAKLTR 142
BLAST of EWM20940.1 vs. NCBI_GenBank
Match: gi|1173950271|gb|OQR98245.1| (valyl-tRNA synthetase [Thraustotheca clavata]) HSP 1 Score: 95.1301 bits (235), Expect = 1.313e-16 Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0 Query: 219 GRWTAEEHEAFLRGLRVYGREWKRVAADIKTRSSAQIRSHAQKYFAKLAK 268 GRWT EEHE FL+GL +YGREWKRVAA IKTR+SAQIRSHAQKYFAK+AK Sbjct: 1113 GRWTDEEHENFLQGLNLYGREWKRVAAKIKTRTSAQIRSHAQKYFAKIAK 1162 The following BLAST results are available for this feature:
BLAST of EWM20940.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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