EWM20936.1, cds9746 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|585100892|gb|EWM20936.1| (Heat shock protein DnaJ [Nannochloropsis gaditana]) HSP 1 Score: 662.914 bits (1709), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 Query: 1 MESNSGGEELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFFSEERVGSGNGRGNFPFGFGGEGLAPRTSFFSPPFFGGAMQQQQGFGFRPFSFAPFTDFDEGGIFQQQFQSSSSTSSRNGFSMSHSSIGNTRSSSSSMTGAGGAISSMSSSMTSQDMGRGTRRSVRTVTTVGAGGRSRTRRETTVSYPDGRCETTVEEQEATPSPDTDAHTRGGGSGMYYLQQQHQQQQGSSRGWM 331 MESNSGGEELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFFSEERVGSGNGRGNFPFGFGGEGLAPRTSFFSPPFFGGAMQQQQGFGFRPFSFAPFTDFDEGGIFQQQFQSSSSTSSRNGFSMSHSSIGNTRSSSSSMTGAGGAISSMSSSMTSQDMGRGTRRSVRTVTTVGAGGRSRTRRETTVSYPDGRCETTVEEQEATPSPDTDAHTRGGGSGMYYLQQQHQQQQGSSRGWM Sbjct: 1 MESNSGGEELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFFSEERVGSGNGRGNFPFGFGGEGLAPRTSFFSPPFFGGAMQQQQGFGFRPFSFAPFTDFDEGGIFQQQFQSSSSTSSRNGFSMSHSSIGNTRSSSSSMTGAGGAISSMSSSMTSQDMGRGTRRSVRTVTTVGAGGRSRTRRETTVSYPDGRCETTVEEQEATPSPDTDAHTRGGGSGMYYLQQQHQQQQGSSRGWM 331
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|553192421|ref|XP_005855567.1| (hypothetical protein NGA_2108900 [Nannochloropsis gaditana CCMP526] >gi|422293494|gb|EKU20794.1| hypothetical protein NGA_2108900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0 Identity = 329/331 (99.40%), Postives = 329/331 (99.40%), Query Frame = 0 Query: 1 MESNSGGEELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFFSEERVGSGNGRGNFPFGFGGEGLAPRTSFFSPPFFGGAMQQQQGFGFRPFSFAPFTDFDEGGIFQQQFQSSSSTSSRNGFSMSHSSIGNTRSSSSSMTGAGGAISSMSSSMTSQDMGRGTRRSVRTVTTVGAGGRSRTRRETTVSYPDGRCETTVEEQEATPSPDTDAHTRGGGSGMYYLQQQHQQQQGSSRGWM 331 MESNSGGEELCFYEILGVPP SSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFFSEERVGSGNGRGNFPFGFGGEGLAPRTSFFSPPFFGGAMQQQQGFGFRPFSFAPFTDFDEGGIFQQQFQSSSSTS RNGFSMSHSSIGNTRSSSSSMTGAGGAISSMSSSMTSQDMGRGTRRSVRTVTTVGAGGRSRTRRETTVSYPDGRCETTVEEQEATPSPDTDAHTRGGGSGMYYLQQQHQQQQGSSRGWM Sbjct: 1 MESNSGGEELCFYEILGVPPASSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFFSEERVGSGNGRGNFPFGFGGEGLAPRTSFFSPPFFGGAMQQQQGFGFRPFSFAPFTDFDEGGIFQQQFQSSSSTSGRNGFSMSHSSIGNTRSSSSSMTGAGGAISSMSSSMTSQDMGRGTRRSVRTVTTVGAGGRSRTRRETTVSYPDGRCETTVEEQEATPSPDTDAHTRGGGSGMYYLQQQHQQQQGSSRGWM 331
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|1084301581|ref|XP_018653881.1| (putative dnaj homolog subfamily B member 2, 6, 8 [Schistosoma mansoni] >gi|360043739|emb|CCD81285.1| putative dnaj homolog subfamily B member 2, 6, 8 [Schistosoma mansoni]) HSP 1 Score: 103.605 bits (257), Expect = 3.192e-22 Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 0 Query: 8 EELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGR 78 E+ C+Y+ILG+ T+S D+IK+AYRRLAL+ HPD+N +EEA + F LI EAYEVLSDP++RD+YDR GR Sbjct: 2 EQTCYYKILGIEKTASGDEIKKAYRRLALKWHPDKNPDKKEEAEKCFKLISEAYEVLSDPKKRDIYDRRGR 72
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|844866431|ref|XP_012799310.1| (DnaJ subfamily B member 8 [Schistosoma haematobium] >gi|685964677|gb|KGB39551.1| DnaJ subfamily B member 8 [Schistosoma haematobium]) HSP 1 Score: 103.605 bits (257), Expect = 3.394e-22 Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 0 Query: 8 EELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGR 78 E+ C+Y+ILG+ T+S D+IK+AYRRLAL+ HPD+N +EEA + F LI EAYEVLSDP++RD+YDR GR Sbjct: 2 EQTCYYKILGIEKTASGDEIKKAYRRLALKWHPDKNPDKKEEAEKCFKLISEAYEVLSDPKKRDIYDRRGR 72
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|514449909|ref|XP_003464046.2| (PREDICTED: dnaJ homolog subfamily B member 2 [Cavia porcellus]) HSP 1 Score: 103.605 bits (257), Expect = 4.715e-22 Identity = 67/167 (40.12%), Postives = 88/167 (52.69%), Query Frame = 0 Query: 11 CFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFFSEERVGSGNGRGNFPFGFGGEGLAP------RTSFFSPPFF 171 +YEIL VPP++S DDIK+AYR+ ALQ HPD+N N+E A + F + EAYEVLSD +R++YDR+GR+GL G + A++ GPG TF F +E+F FF GSG+ PF + L P R S S PFF Sbjct: 3 SYYEILDVPPSASADDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGAGPSRAEAGGGGPG---------------------FTFSFRSPEEVFREFF-----GSGD-----PFAELFDDLGPFSELQNRGSRHSGPFF 138
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|29841011|gb|AAP06024.1| (SJCHGC09407 protein [Schistosoma japonicum] >gi|226470636|emb|CAX76751.1| hypotherical protein [Schistosoma japonicum] >gi|226470638|emb|CAX76752.1| hypotherical protein [Schistosoma japonicum] >gi|226470640|emb|CAX76753.1| hypotherical protein [Schistosoma japonicum] >gi|226470644|emb|CAX76755.1| hypotherical protein [Schistosoma japonicum] >gi|226470646|emb|CAX76756.1| hypotherical protein [Schistosoma japonicum] >gi|226470652|emb|CAX76759.1| hypotherical protein [Schistosoma japonicum] >gi|226470656|emb|CAX76761.1| hypotherical protein [Schistosoma japonicum] >gi|226470658|emb|CAX76762.1| hypotherical protein [Schistosoma japonicum] >gi|226473146|emb|CAX71259.1| hypotherical protein [Schistosoma japonicum]) HSP 1 Score: 102.449 bits (254), Expect = 1.054e-21 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 ELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGR 78 + C+YEILGV T+S DDIK+AYRRLAL+ HPD+N +EEA + F LI EAYE+LSDP++R++YDR GR Sbjct: 3 QTCYYEILGVHKTASGDDIKKAYRRLALKWHPDKNPDKKEEAERQFKLISEAYEILSDPKKRNIYDRRGR 72
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|226470650|emb|CAX76758.1| (hypotherical protein [Schistosoma japonicum] >gi|226470654|emb|CAX76760.1| hypotherical protein [Schistosoma japonicum]) HSP 1 Score: 102.449 bits (254), Expect = 1.109e-21 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 ELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGR 78 + C+YEILGV T+S DDIK+AYRRLAL+ HPD+N +EEA + F LI EAYE+LSDP++R++YDR GR Sbjct: 3 QTCYYEILGVHKTASGDDIKKAYRRLALKWHPDKNPDKKEEAERQFKLISEAYEILSDPKKRNIYDRRGR 72
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|145508704|ref|XP_001440296.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124407513|emb|CAK72899.1| unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 100.908 bits (250), Expect = 2.045e-21 Identity = 40/74 (54.05%), Postives = 59/74 (79.73%), Query Frame = 0 Query: 8 EELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGL 81 +E +YE+LGV T+S D+IK+AYR+LA++ HPD+N N++EA++ F+ IGEAY VLSD ++R +YDR+G GL Sbjct: 4 KEQDYYEVLGVSKTASDDEIKKAYRKLAIKWHPDKNPNNKQEAQEKFIKIGEAYSVLSDKDKRAIYDRYGHDGL 77
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|1134881157|gb|OMJ78801.1| (hypothetical protein SteCoe_21329 [Stentor coeruleus]) HSP 1 Score: 99.7525 bits (247), Expect = 4.271e-21 Identity = 56/125 (44.80%), Postives = 72/125 (57.60%), Query Frame = 0 Query: 12 FYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFF 136 +YEILG+P +++ D IK+AYR+LAL+ HPD+N N+ EA Q F IGEAY VLSDP +R +YD++G +GL RG G DF S HHF+ F A EIF FF Sbjct: 7 YYEILGIPKSATDDQIKKAYRKLALKWHPDKNPENKNEAEQKFKEIGEAYSVLSDPNKRTIYDKYGFEGLEG------------RGASG-------DF--SGFHHFN------FTDASEIFRQFF 104
BLAST of EWM20936.1 vs. NCBI_GenBank
Match: gi|198417911|ref|XP_002123973.1| (PREDICTED: dnaJ homolog subfamily B member 6-like [Ciona intestinalis]) HSP 1 Score: 100.523 bits (249), Expect = 7.905e-21 Identity = 69/183 (37.70%), Postives = 91/183 (49.73%), Query Frame = 0 Query: 12 FYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAGHHFHRDATFGFPHAQEIFDAFFSEERVGSGNGRGNFPFG-FGGEGLAPRTSFFSPPFFGGAMQQQQGFGFRPFSFAPFTD 193 +YE+LG+ ++ DIK+AYR+LAL+ HPD+N N+EEA + F I EAYEVLSD ++R VYDR+G++GL G P +FH F F ++IF FF G+ N PFG F GE + R PF G M G GF+ F F F D Sbjct: 4 YYEVLGIRKEATESDIKKAYRKLALKWHPDKNPDNQEEAEKRFKDISEAYEVLSDKDKRSVYDRYGKEGLTGGGGGGGAGAGMP--------------------NFH----FEFHSPEDIFQQFF-----GNQN-----PFGDFFGENSSSRRQRNQDPFAGFGM----GTGFQSFGFPEFND 148 The following BLAST results are available for this feature:
BLAST of EWM20936.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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