EWM20923.1, cds9741 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|585100879|gb|EWM20923.1| (rho gtpase activating protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 1402.5 bits (3629), Expect = 0.000e+0 Identity = 692/692 (100.00%), Postives = 692/692 (100.00%), Query Frame = 0 Query: 1 MATSLQGFPSEQATAHTLHTKTIRLPGLHRLLLRVQIADLPPSRRALWKDTHHQMRDVVALAGTTAKTIIRTLIESEIPAVSDRDIARFALVMVYPTREVDGSLTHLMRTLNPHERPIKLVNSMLVEMEEMSKGTRKEGVRAIGMADSTGGCPDSSDEGAPGGGREANYETQYGPQIGRDKGEGLIRVMSPRTAFTREQLLDEHLLSWVLKDTEGPPLDFPGYLSGPEASDDETSPTCPAASWFSDQAGWSKPGLSGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEEEKARERRIEGVVERAWAACTERGRDNWKFEEGVTKGKECNASLNVEMGVAGAEERHPETRHVPSARLSVERESRGMVKSRARELLRAKGSNLLGKGGINAEGKVERDRREKDGRRMELSELLGFAIAVQEYREVCRLGDGPVLASSLKMWAKAQAVYDAFLRRWVRLLHDLERERGATGGLLKEEGRDGSVLPEWAGAIYIERQLLEYAACERRQRGGASLSRGAARQGKKDDKRAGTAKTKLRALPRLLNKHGDSFAADPINTAPSVSLECEEAELGRSLPPPPKELFDETLQELERSAQLIIERDSNKRNEEE 692 MATSLQGFPSEQATAHTLHTKTIRLPGLHRLLLRVQIADLPPSRRALWKDTHHQMRDVVALAGTTAKTIIRTLIESEIPAVSDRDIARFALVMVYPTREVDGSLTHLMRTLNPHERPIKLVNSMLVEMEEMSKGTRKEGVRAIGMADSTGGCPDSSDEGAPGGGREANYETQYGPQIGRDKGEGLIRVMSPRTAFTREQLLDEHLLSWVLKDTEGPPLDFPGYLSGPEASDDETSPTCPAASWFSDQAGWSKPGLSGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEEEKARERRIEGVVERAWAACTERGRDNWKFEEGVTKGKECNASLNVEMGVAGAEERHPETRHVPSARLSVERESRGMVKSRARELLRAKGSNLLGKGGINAEGKVERDRREKDGRRMELSELLGFAIAVQEYREVCRLGDGPVLASSLKMWAKAQAVYDAFLRRWVRLLHDLERERGATGGLLKEEGRDGSVLPEWAGAIYIERQLLEYAACERRQRGGASLSRGAARQGKKDDKRAGTAKTKLRALPRLLNKHGDSFAADPINTAPSVSLECEEAELGRSLPPPPKELFDETLQELERSAQLIIERDSNKRNEEE Sbjct: 1 MATSLQGFPSEQATAHTLHTKTIRLPGLHRLLLRVQIADLPPSRRALWKDTHHQMRDVVALAGTTAKTIIRTLIESEIPAVSDRDIARFALVMVYPTREVDGSLTHLMRTLNPHERPIKLVNSMLVEMEEMSKGTRKEGVRAIGMADSTGGCPDSSDEGAPGGGREANYETQYGPQIGRDKGEGLIRVMSPRTAFTREQLLDEHLLSWVLKDTEGPPLDFPGYLSGPEASDDETSPTCPAASWFSDQAGWSKPGLSGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEEEKARERRIEGVVERAWAACTERGRDNWKFEEGVTKGKECNASLNVEMGVAGAEERHPETRHVPSARLSVERESRGMVKSRARELLRAKGSNLLGKGGINAEGKVERDRREKDGRRMELSELLGFAIAVQEYREVCRLGDGPVLASSLKMWAKAQAVYDAFLRRWVRLLHDLERERGATGGLLKEEGRDGSVLPEWAGAIYIERQLLEYAACERRQRGGASLSRGAARQGKKDDKRAGTAKTKLRALPRLLNKHGDSFAADPINTAPSVSLECEEAELGRSLPPPPKELFDETLQELERSAQLIIERDSNKRNEEE 692
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|299115138|emb|CBN75505.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.8189 bits (229), Expect = 1.099e-15 Identity = 60/188 (31.91%), Postives = 92/188 (48.94%), Query Frame = 0 Query: 208 WVLKDTEGPPLD---FPGYLSGPEASDDETSPTCPAASWFSDQAGWSKPGLSGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEEEKARERRIEGVVERA 392 W+ ++ P LD +SG + S+DE A W D G + GYL K+S DP LWRRRWC+L +D+ W +++K +S R + + S L E+ + +RV FRA SR +Q WV ++R R A E+ ++++AE +V +EE AR RR+ + A Sbjct: 449 WIYRERTAPALDPDELQVEVSGSDTSEDERR-----AGWI-DLRGLGQGHYCGYLQKKSRSDPNLWRRRWCILADDRLWLLRSKSEQSGRRRGGGRS--------------HSFSLALAPSHCFELHSQNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNVTLSSA 616
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|813233372|ref|XP_012213476.1| (hypothetical protein SPRG_18648, partial [Saprolegnia parasitica CBS 223.65] >gi|641518515|gb|KDO15816.1| hypothetical protein SPRG_18648, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 72.0182 bits (175), Expect = 1.048e-9 Identity = 53/174 (30.46%), Postives = 85/174 (48.85%), Query Frame = 0 Query: 206 LSWVLKDTEGPPLDFPGYLSGPEASDDETSPTCPAASWFSDQAGWSKPGL-SGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAK-HRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEE 377 L +V KDT P+D L P S+ + T A F + G G+ SG L K S +D +WR RW VL EDK +Y K++ ++R + I L+ ++ + P E+ T+ RV+ A S + W+ A+ R +RL +EN+ L+ AE+++ +E Sbjct: 183 LKFVFKDTRAKPIDLDADLE-PRTSNTNSQDTVFA---FPQKLGQ---GIRSGTLKKASLKDANVWRTRWFVLKEDKLFYCKSEMNQRDITA----IPLLNSCIVKADVQ----------IPHCFELHTSRRVYRLCAASDDLMVGWIHALHREIRLCSENQALSKAEIIIVDE 335
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|813164966|ref|XP_012203543.1| (hypothetical protein SPRG_09033 [Saprolegnia parasitica CBS 223.65] >gi|641531674|gb|KDO25734.1| hypothetical protein SPRG_09033 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 72.4034 bits (176), Expect = 1.207e-9 Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 0 Query: 206 LSWVLKDTEGPPLDFPGYLSGPEASDDETSPTCPAASWFSDQAGWSKPGL-SGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEE 377 L +V KDT P+D L P S+ + T A F + G G+ SG L K S +D +WR RW VL EDK +Y K++ + R A I L+ ++ + P E+ T+ RV+ A S + W+ A+ R +RL +EN+ L+ AE+++ +E Sbjct: 165 LKFVFKDTRAKPIDLDADLE-PRTSNTNSQDTVFA---FPQKLG---QGIRSGTLKKASLKDANVWRTRWFVLKEDKLFYCKSE--MNQRDITA-IPLLNSCIVKADVQ----------IPHCFELHTSRRVYRLCAASDDLMVGWIHALHREIRLCSENQALSKAEIIIVDE 317
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|669144440|ref|XP_008607782.1| (hypothetical protein SDRG_03913 [Saprolegnia diclina VS20] >gi|530740716|gb|EQC38958.1| hypothetical protein SDRG_03913 [Saprolegnia diclina VS20]) HSP 1 Score: 72.0182 bits (175), Expect = 1.529e-9 Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 0 Query: 206 LSWVLKDTEGPPLDFPGYLSGPEASDDETSPTCPAASWFSDQAGWSKPGL-SGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEE 377 L +V KDT P+D L P S+ + T A F + G G+ SG L K S +D +WR RW VL EDK +Y K++ + R A I L+ ++ + P E+ T+ RV+ A S + W+ A+ R +RL +EN+ L+ AE+++ +E Sbjct: 165 LKFVFKDTRAKPIDLDADLE-PRTSNTNSQDTVFA---FPQKLG---QGMRSGTLKKASLKDANVWRTRWFVLKEDKLFYCKSE--MNQRDITA-IPLLNSCIVKADVQ----------IPHCFELHTSRRVYRLCAGSDDLMVAWIHALHREIRLCSENQALSKAEIIIVDE 317
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|673044345|ref|XP_008876133.1| (hypothetical protein H310_11302 [Aphanomyces invadans] >gi|574468413|gb|ETV95432.1| hypothetical protein H310_11302 [Aphanomyces invadans]) HSP 1 Score: 70.8626 bits (172), Expect = 4.533e-9 Identity = 52/187 (27.81%), Postives = 88/187 (47.06%), Query Frame = 0 Query: 206 LSWVLKDTEGPPLDFPGYLSGPEASDDETSPTCPAASW-FSDQAGWS-----------KPGL---SGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEE 377 L ++ KD G P+D L E + + ++PT + + +Q + K GL +G L K S +D +WR RW VL +DK +Y K++ + R A I L+ Q++ + + P E+ T+ RV+ F + + + W+ A+ R +RLA EN+ L AE + +E Sbjct: 205 LKFIFKDIRGKPIDLEAEL---ELTPNYSNPTSALSQYGHPNQHNMAASQDTVFLLPQKLGLGLRAGTLKKASLKDANVWRSRWFVLKDDKLYYCKSEFNQ--RDITA-IPLLNAQIVKQDA----------LVPHCFELHTSRRVYRFCSATDDSMMAWIHALHREIRLAAENQMLTKAESFIVDE 375
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|698802792|ref|XP_009834425.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|698802794|ref|XP_009834426.1| hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574110802|gb|ETV76300.1| hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574110803|gb|ETV76301.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 69.707 bits (169), Expect = 7.157e-9 Identity = 59/220 (26.82%), Postives = 99/220 (45.00%), Query Frame = 0 Query: 206 LSWVLKDTEGPPLDFPGYLS-GPEASDDETSPTC--------PAASWFSDQAGWSKP-----GL-SGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEE-----EKARER---RIEGVVERAWAACTERGRD 402 L ++ KD G P+D L P S+ T+ P + S + P GL +G L K S +D +WR RW VL +DK +Y K++ + + I L+ ++ + + P E+ T+ RV+ F + + W+QA+ R +RLA EN+ L AE+ + +E E+ +ER + G++ +AA + RD Sbjct: 78 LKFIFKDIRGKPIDLEAELELTPNYSNSTTTTLSQYGSHAAHPRNTTMSQDTVFLLPQKLGLGLRAGPLKKASVKDANVWRSRWFVLKDDKLYYCKSE---ANQRDVTAIPLLNAHIVKQDA----------LVPHCFELHTSRRVYRFCTDTDDIMMAWIQALHREIRLAAENQVLTKAEIFIVDEAVTTCERKQERAPFAVSGIL--GYAALRKMFRD 282
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|1173942411|gb|OQR91422.1| (hypothetical protein ACHHYP_04724 [Achlya hypogyna]) HSP 1 Score: 69.707 bits (169), Expect = 8.697e-9 Identity = 56/197 (28.43%), Postives = 90/197 (45.69%), Query Frame = 0 Query: 206 LSWVLKDTEGPPLDFPGYLSGPEASDDETSPTCPAASWFSDQAGWSKPGL-SGYLLKRSSRDPCLWRRRWCVLG------------EDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEEEKARERRIEGVV 389 L +V KDT PLD L P ++ + T A F + G G+ SG L K S +D +WR RW VL EDK +Y K++ + R A I L+ ++ + P E+ T+ RV+ A S +Q W+ A+ R +RL +EN+ L+ AE+++ +E + + G++ Sbjct: 157 LKFVFKDTRAKPLDLDADLE-PRTANTNSQDTVFA---FPQKLG---NGIRSGTLKKASLKDANVWRTRWFVLKARVQAFVDLASQEDKLFYCKSE--MNQRDITA-IPLLNSCIVKADVQ----------IPHCFELHTSRRVYRLCATSDDQMVAWIHALHREIRLCSENQALSKAEIIIVDENTSTPFAVSGIL 333
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|698802790|ref|XP_009834424.1| (hypothetical protein H257_09767 [Aphanomyces astaci] >gi|574110801|gb|ETV76299.1| hypothetical protein H257_09767 [Aphanomyces astaci]) HSP 1 Score: 69.707 bits (169), Expect = 8.891e-9 Identity = 59/220 (26.82%), Postives = 99/220 (45.00%), Query Frame = 0 Query: 206 LSWVLKDTEGPPLDFPGYLS-GPEASDDETSPTC--------PAASWFSDQAGWSKP-----GL-SGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEE-----EKARER---RIEGVVERAWAACTERGRD 402 L ++ KD G P+D L P S+ T+ P + S + P GL +G L K S +D +WR RW VL +DK +Y K++ + + I L+ ++ + + P E+ T+ RV+ F + + W+QA+ R +RLA EN+ L AE+ + +E E+ +ER + G++ +AA + RD Sbjct: 216 LKFIFKDIRGKPIDLEAELELTPNYSNSTTTTLSQYGSHAAHPRNTTMSQDTVFLLPQKLGLGLRAGPLKKASVKDANVWRSRWFVLKDDKLYYCKSE---ANQRDVTAIPLLNAHIVKQDA----------LVPHCFELHTSRRVYRFCTDTDDIMMAWIQALHREIRLAAENQVLTKAEIFIVDEAVTTCERKQERAPFAVSGIL--GYAALRKMFRD 420
BLAST of EWM20923.1 vs. NCBI_GenBank
Match: gi|675184879|ref|XP_008901324.1| (hypothetical protein PPTG_08142 [Phytophthora parasitica INRA-310] >gi|567967562|gb|ETK92734.1| hypothetical protein L915_03982 [Phytophthora parasitica] >gi|567996025|gb|ETL46149.1| hypothetical protein L916_03928 [Phytophthora parasitica] >gi|568025265|gb|ETL99283.1| hypothetical protein L917_03843 [Phytophthora parasitica] >gi|568098535|gb|ETN13262.1| hypothetical protein PPTG_08142 [Phytophthora parasitica INRA-310] >gi|570957695|gb|ETP22674.1| hypothetical protein F441_04077 [Phytophthora parasitica CJ01A1] >gi|570993279|gb|ETP50652.1| hypothetical protein F442_04087 [Phytophthora parasitica P10297]) HSP 1 Score: 67.781 bits (164), Expect = 4.388e-8 Identity = 56/195 (28.72%), Postives = 85/195 (43.59%), Query Frame = 0 Query: 206 LSWVLKDTEGPPLDFPGYLSGPEASDDET-SPTCPAASWFSDQAGWSKPGLSGYLLKRSSRDPCLWRRRWCVLGEDKFWYMKAKHRRSMRGKAAFIALMGMQVLDLECGEGESRELQRVAPLGVEVQTADRVFVFRALSREQQAEWVQAMRRGVRLATENEWLAMAELVVGEEEKARERRIEGVVERAWAACTER 399 + +VLKD +G LD + P ET S P K SGYL K SSRDP LWR+RW ++ D+ Y K+ + I+L+G L + E R P +++T R + A S+++ W+ A+ + L +EN L AE+ + E+ R + V A + ER Sbjct: 267 VKFVLKDVQGSHLDISENTAPPRRQPSETQSINFPVL--------LGKGVYSGYLQKASSRDPTLWRKRWFIIKGDQLLYCKSNVNQQ---DVTSISLLGAV---LAKAKPEVR-----VPFSFQLKTPRRDYELCASSKDEMVAWIHALHVQIGLCSENHRLYEAEIWITEDAVNRSEQESYVPSAAEPSLLER 442 The following BLAST results are available for this feature:
BLAST of EWM20923.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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