EWM20939.1, cds9736 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|585100895|gb|EWM20939.1| (cytochrome b-561 domain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 652.514 bits (1682), Expect = 0.000e+0 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
Query: 1 MMQAPQNCVHVSILAVCSLYRTLPRLTYPLFTNFTDAVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI 318
MMQAPQNCVHVSILAVCSLYRTLPRLTYPLFTNFTDAVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI
Sbjct: 1 MMQAPQNCVHVSILAVCSLYRTLPRLTYPLFTNFTDAVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI 318
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|585100894|gb|EWM20938.1| (cytochrome b-561 domain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0 Identity = 286/299 (95.65%), Postives = 286/299 (95.65%), Query Frame = 0
Query: 20 YRTLPRLTYPLFTNFTDAVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI 318
YR P F D VTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI
Sbjct: 39 YRQRP------FVKTLDNVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI 331
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|299117222|emb|CBN75184.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 137.502 bits (345), Expect = 5.429e-35 Identity = 87/269 (32.34%), Postives = 131/269 (48.70%), Query Frame = 0
Query: 36 DAVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPF-------RPTEDGG---LTDRELIELRREGGCDGGDEK 294
D +T R VA K V+ + H+ + L + + ++ +L LFS H M++ V+ M EG++AYRNH LSPIM N + K + IH +LA++ +G+ FI NKV +ILP + H +G + MV+Q++ G K + SGVI R G YRWHGK GL+LYD++ +V GL G ++ ++ L + W V+LQM T+D LT E +L EG + E+
Sbjct: 13 DKITTARARVVAASKS-PAWVKPRFLTHIMGPVIALIVIASTFSKTESLNLFSLHATCMALAFVVLMPEGVVAYRNHLLLDSLSPIMSNGTKAKKRTIHLTLQVLASMFAALGLFFIAGNKVYHRNSILPRTWHGVVGAITLLAMVMQVVVGRLKHMSFTSGVIDARNR---GKKYRWHGKMGLLLYDLSTVSVVLGLWTFFGLSVVAVVVPLMLAYAWLNVNLQMHETKHITVPVYSEGTDDPAGEKLTAPETKQLEEEGVPESKGER 277
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|302834563|ref|XP_002948844.1| (hypothetical protein VOLCADRAFT_116942 [Volvox carteri f. nagariensis] >gi|300266035|gb|EFJ50224.1| hypothetical protein VOLCADRAFT_116942 [Volvox carteri f. nagariensis]) HSP 1 Score: 63.1586 bits (152), Expect = 1.141e-7 Identity = 55/163 (33.74%), Postives = 82/163 (50.31%), Query Frame = 0
Query: 83 TLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPT------SIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGF 239
T LF++HPV M++G V+FM E +L+Y+ +PI+ R + IH G H+ A VCV +G F ++ HR LP S H+ LG AL+ LQ++ GL R G+ + R G L+R+ G + A+ VATGL + + F
Sbjct: 67 TSKLFNWHPVLMTLGFVVFMAEALLSYQ--------APIIPGLPREVRKRIHLGCHLAATVCVFLG----FVAVLQSHRLKLPDPMPDWYSPHSFLGLTAIALVGLQVLVGLYSYVWPRLGL---SHRMALGPLHRF---WGAAAWLAALGAVATGLQEKVTF 211
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|813158013|ref|XP_012202355.1| (hypothetical protein SPRG_07687 [Saprolegnia parasitica CBS 223.65] >gi|641532967|gb|KDO26974.1| hypothetical protein SPRG_07687 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 62.003 bits (149), Expect = 1.712e-7 Identity = 43/150 (28.67%), Postives = 71/150 (47.33%), Query Frame = 0
Query: 84 LTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGL 233
+ L H + M++G V F +E +L YR SP + R++ +NIH+ H ++G+A I ++ + + P + H +GF+ ALM+LQM G KL + GR ++ WHG G + Y +A+ GL
Sbjct: 91 VNLLFVHILMMTLGWVAFSSEAMLVYRPFDGLNARSP----NKRIQ-RNIHKFMHYAVLATTLLGLAGILISRGMAGKRLFPHNKHGWMGFITVALMLLQMEVGRRKLK-----FLQFQGR----TIFEWHGMVGKLTYASGIASTILGL 226
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|669169219|ref|XP_008619958.1| (hypothetical protein SDRG_15560 [Saprolegnia diclina VS20] >gi|530728378|gb|EQC26620.1| hypothetical protein SDRG_15560 [Saprolegnia diclina VS20]) HSP 1 Score: 61.6178 bits (148), Expect = 2.335e-7 Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 0
Query: 84 LTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLV 234
+ L H + M++G V F +E +L YR SP + R++ +NIH+ H ++G+A I ++ + + P + H +GF+ ALM+LQM G KL + GR ++ WHG G + Y +A+ GL
Sbjct: 91 VNLLFVHILMMTLGWVAFSSEAMLVYRPFDGLNARSP----NKRIQ-RNIHKFMHYAVLATTLLGLAGILISRGMAGKRLFPHNKHGWMGFITVALMLLQMEVGRRKLK-----FLQFQGR----TIFEWHGFVGKLTYASGIASTILGLT 227
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|669169223|ref|XP_008619960.1| (hypothetical protein SDRG_15562 [Saprolegnia diclina VS20] >gi|530728380|gb|EQC26622.1| hypothetical protein SDRG_15562 [Saprolegnia diclina VS20]) HSP 1 Score: 61.6178 bits (148), Expect = 2.664e-7 Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 0
Query: 84 LTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLV 234
+ L H + M++G V F +E +L YR SP + R++ +NIH+ H ++G+A I ++ + + P + H +GF+ ALM+LQM G KL + GR ++ WHG G + Y +A+ GL
Sbjct: 91 VNLLFVHILMMTLGWVAFSSEAMLVYRPFDGLNARSP----NKRIQ-RNIHKFMHYAVLATTLLGLAGILISRGMAGKRLFPHNKHGWMGFITVALMLLQMEVGRRKLK-----FLQFQGR----TIFEWHGFVGKLTYASGIASTILGLT 227
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|1173927838|gb|OQR81641.1| (hypothetical protein THRCLA_23332 [Thraustotheca clavata]) HSP 1 Score: 60.8474 bits (146), Expect = 4.834e-7 Identity = 41/150 (27.33%), Postives = 69/150 (46.00%), Query Frame = 0
Query: 84 LTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGL 233
L L+ H + M++ V F +E +L YR SP + R++ +NIH+ C ++G+A I ++ + + P + H +GF+ LM+LQM G KL + + G +Y WH G + Y +A+ GL
Sbjct: 81 LNLYFVHILLMTVAWVAFSSEALLVYRPFDGLNTRSP----NRRIQ-RNIHKIMLYSVGACTLLGLAAILFSRAMAGKRLFPHNWHGWMGFITIGLMLLQMEIGRRKLK---------HLQFQGRTIYEWHAVVGKLTYASGIASTLFGL 216
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|1108934812|ref|XP_010736985.2| (PREDICTED: cytochrome b561 domain-containing protein 2 [Larimichthys crocea] >gi|808878387|gb|KKF26639.1| Cytochrome b561 domain-containing protein 2 [Larimichthys crocea]) HSP 1 Score: 60.077 bits (144), Expect = 5.330e-7 Identity = 49/142 (34.51%), Postives = 67/142 (47.18%), Query Frame = 0
Query: 85 TLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILP--TSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGV--LYRWHGKAGLILY 222
+LFS+HP M++ LFMTE IL + H SPI R + K +H L C V+G+A IF N KH P TS H LG L ++VLQ +A + +I + G + L R+H GL+ Y
Sbjct: 45 SLFSWHPFLMTLAFSLFMTEAILLFSPHG-----SPIKRFPHKTK-GRVHWILQCLCVSCAVLGLAAIFYN---KHLNGKPHFTSWHGLLGLLTVCVVVLQSLAAVP--------LIYHSLAKGWSLAKLKRYHAATGLVTY 169
BLAST of EWM20939.1 vs. NCBI_GenBank
Match: gi|913822621|emb|CRK38716.1| (hypothetical protein BN1723_004441 [Verticillium longisporum]) HSP 1 Score: 60.4622 bits (145), Expect = 7.956e-7 Identity = 57/208 (27.40%), Postives = 95/208 (45.67%), Query Frame = 0
Query: 24 PRLTYPLFTNFTDAVTELRRNFVARLKIL-DPLVE-SNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATV 229
P T PL F RR+ KI +P+++ + + ++L+ IW LA H + LF+ HP+ S+ +L +T+ +L L P + + + Q +H ++ A + +V G+ I NK + H S+H LG LV AL+ LQ + G + GG R ++++H AG +LY +ATV
Sbjct: 44 PSATTPLLGGF-------RRSQPTTAKIWKNPIIDWPGITAQILILALVAIIWSYILA--HPVILFTGHPLAQSL-AILILTQSVLV---------LQPTHDAAQKRQGQRVHAVLNLAAFLLLVAGVTIIEVNKFRSHGPHF-HSLHGYLGVLVAALIALQYLVGFTMWAV--PSLYGGEDR--AKAVWKYHRAAGYVLYVALLATV 227 The following BLAST results are available for this feature:
BLAST of EWM20939.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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