EWM20912.1, cds9729 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|585100868|gb|EWM20912.1| (plant like protein [Nannochloropsis gaditana]) HSP 1 Score: 595.119 bits (1533), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0 Query: 1 MDHWIAWVCHHTDRVGGVHTCGMWPRRCRPVSCYIPPHRLPTSLTSDLSNRNSRTGGFPPLRAPPMRAFYLLALSSLLAANVAMAVSRPSTDMSSSCFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF 295 MDHWIAWVCHHTDRVGGVHTCGMWPRRCRPVSCYIPPHRLPTSLTSDLSNRNSRTGGFPPLRAPPMRAFYLLALSSLLAANVAMAVSRPSTDMSSSCFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF Sbjct: 1 MDHWIAWVCHHTDRVGGVHTCGMWPRRCRPVSCYIPPHRLPTSLTSDLSNRNSRTGGFPPLRAPPMRAFYLLALSSLLAANVAMAVSRPSTDMSSSCFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF 295
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|553189027|ref|XP_005854917.1| (hypothetical protein NGA_0603620 [Nannochloropsis gaditana CCMP526] >gi|422294146|gb|EKU21446.1| hypothetical protein NGA_0603620 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 415.231 bits (1066), Expect = 3.613e-145 Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 0 Query: 84 MAVSRPSTDMSSSCFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF 295 MAVSRP TDMSSSCFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPF+NLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF Sbjct: 1 MAVSRPVTDMSSSCFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFVNLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF 212
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|1189380158|gb|OSX68593.1| (hypothetical protein BU14_2526s0001, partial [Porphyra umbilicalis]) HSP 1 Score: 97.0561 bits (240), Expect = 3.004e-21 Identity = 55/148 (37.16%), Postives = 88/148 (59.46%), Query Frame = 0 Query: 149 SATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYL-LIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF 295 ++ PYLLP+LD + + RF+ AP L + A+ PL +Y+ +PF I+ L V + R SR+VRFN QQA+++DV L++P +L + P W+ E ++T+F+ + AS+ Y V G+ P++IP +SEA E GP+ Sbjct: 2 ASAPYLLPLLDGLVFGRFVFERAPALAALVVPAVAPLFRLYRGTPFFAFGIFFALYVLIVRNTGFSRFVRFNTQQALLIDVVLILPQLLGGAVAAAGVPGWILEAGSSTIFYAVVASVVYAVVSNLRGETPDQIPGVSEAVEAQIGPY 149
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|298713221|emb|CBJ33519.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 91.6633 bits (226), Expect = 5.700e-19 Identity = 53/165 (32.12%), Postives = 90/165 (54.55%), Query Frame = 0 Query: 130 MRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGP 294 M+ + + S+ RA YLLP+LD ++ R + P L + ++ L P LA++ PF+ L +++++ R+ SR++RFN QQAI++D+ V+ +L + AP ++ V N F+ L ++AY + G+ N+IPLIS AAE+ GP Sbjct: 1 MKASGQGGGKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTA-AGYVAPEG-EQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGP 163
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|219117465|ref|XP_002179527.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409418|gb|EEC49350.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 94.7449 bits (234), Expect = 1.675e-18 Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 0 Query: 140 SPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAA----PVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEA 287 +P+ ++ S PYL P+LD + ++RFL PD NPI + A+Y++ PF + + ++ P ++R +R+N QQAI LD+AL P ++ ++ P V E ++ +F L A+L Y V LG P++IP+ISEA Sbjct: 200 APTTQDKLISVLPYLFPLLDGLQFARFLVLENPD--NPISGIIALSYALYRSIPFGGFIAFFALSFLSGNPTINRLIRYNMQQAIFLDIALFFPGLIAAVFSLVGGGKFLPQGVTEIGSDVMFVTLLATLGYCTVSSLLGGTPDKIPIISEA 349
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|545707841|ref|XP_005706234.1| (hypothetical protein Gasu_29350 [Galdieria sulphuraria] >gi|452822697|gb|EME29714.1| hypothetical protein Gasu_29350 [Galdieria sulphuraria]) HSP 1 Score: 90.1225 bits (222), Expect = 8.064e-18 Identity = 54/163 (33.13%), Postives = 87/163 (53.37%), Query Frame = 0 Query: 135 NQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIY-LLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSI-LTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF 295 N P PS R + PYL+P+LD + Y RF+ P + I+ L PLL VY+ PF+ ++ +L ++ R + ++RFN QAI++D+ L+IP + L + A P V E + + +F + YV + + G KP+++PLISEA+ F Sbjct: 72 NLIPLKPSPKNRLLAFLPYLMPLLDGVVYGRFVFAKYPVISAFIFYPLQPLLIVYRGIPFLAFVLFAMLFYFIVRNETVDNFIRFNTMQAILIDLVLIIPQMFLHATSASGAIPPGVVESLCSLVFCAIVVITMYVIICVARGNKPDQVPLISEASRAQLNRF 234
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|1201310363|gb|OVA10826.1| (hypothetical protein BVC80_8199g11 [Macleaya cordata]) HSP 1 Score: 88.1965 bits (217), Expect = 3.336e-17 Identity = 74/224 (33.04%), Postives = 111/224 (49.55%), Query Frame = 0 Query: 72 LALSSLLAANVAMAVSRPSTDMSSS-CFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLL---AVYKASPFINLAIYLLIVW-VGRQPALSRYVRFNFQQAIILDVALVIPSILT-SILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAE 289 +A+++LLA +V T +SSS C S + SL + P A + S ++ N N S + P +R +A Y P D I Y + Y + F PI L PL+ V+K+ PF ++L + + V R P SRYVRFN QAI+LDV L+ P +L S + + + + +T+F L SL Y + LGQ P +P+++EAAE Sbjct: 1 MAMAALLAFSVTPQTFSHKTHLSSSLCSFKHS---SFLSLTK-----PRIAIKPKRSISVQSNGNNSADPP---DRLIAAICYFYPFFDGIQYGK----YVINQFTPIQVLLQPLIPAIRVFKSFPFNGFLVFLTLYFIVVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERSFHPSEGVGLDLMMSLDSTVFLFLLVSLIYGSSSCLLGQVP-RLPIVAEAAE 208
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|544217176|ref|XP_005538732.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449019294|dbj|BAM82696.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 89.7373 bits (221), Expect = 5.738e-17 Identity = 53/153 (34.64%), Postives = 85/153 (55.56%), Query Frame = 0 Query: 145 ERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIY-LLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAA--EMTAGP 294 ER PYL+P+LDS+ Y +++ P + L PLL++Y+ PF+ L I+ L++V V R P +S +VRFN QA+ LD+AL++P + + + + ++F+ + + YV GQ P+ IPLISEAA + +GP Sbjct: 181 ERLLGILPYLVPLLDSLVYGKYVFERFPIFSMFVLQPLWPLLSIYRGIPFLPLIIFVLMLVLVVRNPRVSYFVRFNTMQALTLDIALILPQLFQGLSNALPVSAVAIQVLQASVFYGMLGCILYVIQSCGRGQVPDRIPLISEAAHTQTMSGP 333
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|1210530764|dbj|GAX10715.1| (hypothetical protein FisN_14Lh231 [Fistulifera solaris]) HSP 1 Score: 88.9669 bits (219), Expect = 1.501e-16 Identity = 53/155 (34.19%), Postives = 82/155 (52.90%), Query Frame = 0 Query: 135 NQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPV--WVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEA 287 N P +P+ +R S PYL P++D + Y+ FL D NP+ +Y+A PF + + +V +P ++R VRFN QQAI LD+AL P ++T + PV + E + +FF L+A++ Y LG P++IP IS+A Sbjct: 182 NDGPPTPT--DRIVSVLPYLFPLMDGLQYASFLLLKNQD--NPLAVLSLVTYTLYRAIPFGGFIAFFALFYVAGKPEINRLVRFNTQQAIYLDIALFFPGLITGLFAILGGPVDPTLAEITNDAIFFTLAAAILYSVGSSLLGIYPDKIPFISDA 332
BLAST of EWM20912.1 vs. NCBI_GenBank
Match: gi|551657247|ref|XP_005831395.1| (hypothetical protein GUITHDRAFT_139670 [Guillardia theta CCMP2712] >gi|428175526|gb|EKX44415.1| hypothetical protein GUITHDRAFT_139670 [Guillardia theta CCMP2712]) HSP 1 Score: 85.8853 bits (211), Expect = 1.823e-16 Identity = 62/205 (30.24%), Postives = 101/205 (49.27%), Query Frame = 0 Query: 91 TDMSSSCFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMR-LNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYL-LIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAG 293 T ++ C VP+S + R P +P ++ R + ++ N E R S PY+LP++DS++Y RFL P L L P + + +A P I+ +L L ++V R + R++RFN QA++L++ L+ P ILTS P E V+N F+ ++A + Y + G+ P +IP+IS A G Sbjct: 2 TLVTGFCRVPSS--SLQLGFRERHPLRLAPVSARRDRVAKQDISMNIVKEGAL---RVVSCLPYILPMMDSLSYGRFLFQKIPLLAFIFMKPLQPFVELAQAFPMISFVAFLGLFLFVVRNRKVPRFIRFNTMQALLLEILLIFPQILTSGNMGGLIPFVFTEFVSNMTFYAIAAIVGYSCISNLRGELPCKIPVISTAVFQQIG 201 The following BLAST results are available for this feature:
BLAST of EWM20912.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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