EWM20954.1, cds9719 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20954.1 vs. NCBI_GenBank
Match: gi|585100918|gb|EWM20954.1| (beta-ketoacyl-acyl-carrier-protein synthase ii [Nannochloropsis gaditana]) HSP 1 Score: 243.817 bits (621), Expect = 1.379e-81 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
Query: 1 MCCVLHFLDSLCFSFLPCFPQITVQAAMEKLSLAVVGSLAVASAFQPSSFFLLQHPSLSSRSSPVARKAGSISMDLPPLQRKRVVITGVGAVSPLGWGDDFWNGLIEGRSGISPTPSSPPTT 122
MCCVLHFLDSLCFSFLPCFPQITVQAAMEKLSLAVVGSLAVASAFQPSSFFLLQHPSLSSRSSPVARKAGSISMDLPPLQRKRVVITGVGAVSPLGWGDDFWNGLIEGRSGISPTPSSPPTT
Sbjct: 1 MCCVLHFLDSLCFSFLPCFPQITVQAAMEKLSLAVVGSLAVASAFQPSSFFLLQHPSLSSRSSPVARKAGSISMDLPPLQRKRVVITGVGAVSPLGWGDDFWNGLIEGRSGISPTPSSPPTT 122
BLAST of EWM20954.1 vs. NCBI_GenBank
Match: gi|1088317886|gb|OHB69429.1| (hypothetical protein A2W17_10650 [Planctomycetes bacterium RBG_16_41_13]) HSP 1 Score: 58.9214 bits (141), Expect = 1.041e-7 Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query: 81 RKRVVITGVGAVSPLG-WGDDFWNGLIEGRSGISPTPS 117
+KRVVITG+GAVSPLG ++FWNGLIEG+SGI+P S
Sbjct: 2 KKRVVITGLGAVSPLGNTKEEFWNGLIEGKSGIAPMAS 39
BLAST of EWM20954.1 vs. NCBI_GenBank
Match: gi|1088350548|gb|OHB97640.1| (hypothetical protein A2W74_00340 [Planctomycetes bacterium RIFCSPLOWO2_12_38_17]) HSP 1 Score: 58.5362 bits (140), Expect = 1.180e-7 Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query: 82 KRVVITGVGAVSPLGWG-DDFWNGLIEGRSGISPTPS 117
KRVVITG+G VSPLG +DFWNGLIEG+SGI+P S
Sbjct: 3 KRVVITGIGVVSPLGCKKEDFWNGLIEGKSGIAPMTS 39
BLAST of EWM20954.1 vs. NCBI_GenBank
Match: gi|91200508|emb|CAJ73556.1| (similar to 3-oxoacyl-[acyl-carrier-protein] synthase I [Candidatus Kuenenia stuttgartiensis]) HSP 1 Score: 58.151 bits (139), Expect = 1.881e-7 Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 0
Query: 81 RKRVVITGVGAVSPLG-WGDDFWNGLIEGRSGISPTPS 117
+KRVVITG+GAVSPLG ++FWNGL+EG+SGI+P S
Sbjct: 2 KKRVVITGLGAVSPLGNTKEEFWNGLVEGKSGIAPMTS 39 The following BLAST results are available for this feature:
BLAST of EWM20954.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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