EWM20957.1, cds9716 (CDS) Nannochloropsis gaditana

Overview
NameEWM20957.1
Unique Namecds9716
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:12535..13284 +
Alignment locationKK037256.1:13484..13495 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20957.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102064g1.10481.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:12535..13284 +
KK037256.1supercontigKK037256.1:13484..13495 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20957.1 vs. NCBI_GenBank
Match: gi|585100925|gb|EWM20957.1| (hypothetical protein Naga_102064g1 [Nannochloropsis gaditana])

HSP 1 Score: 485.723 bits (1249), Expect = 5.264e-173
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0 
Query:    1 MWLARPPSLLLLLLSLLSSAMRASRAAVALATSAAMARAHLNASVPSPAIPSSSPAPEEGKEGEKEGRKEGGKEGKLRGRAAVVAKAGEGVRFLLLQETIICKCLLRVAVTLSGGDTAEEEGEEEGGKEGGREGRRRSVEGRGAICLFLSHLLSYHPPVLPLLLRRGELSSPALLLLADCIPAFLLFLPPSLPPSIPPFSLRGTSLVTHARDLAVLAEFIRRYPLPAAFRSAHSAIIALLHRHLRPVVLQGKT 253
            MWLARPPSLLLLLLSLLSSAMRASRAAVALATSAAMARAHLNASVPSPAIPSSSPAPEEGKEGEKEGRKEGGKEGKLRGRAAVVAKAGEGVRFLLLQETIICKCLLRVAVTLSGGDTAEEEGEEEGGKEGGREGRRRSVEGRGAICLFLSHLLSYHPPVLPLLLRRGELSSPALLLLADCIPAFLLFLPPSLPPSIPPFSLRGTSLVTHARDLAVLAEFIRRYPLPAAFRSAHSAIIALLHRHLRPVVLQGKT
Sbjct:    1 MWLARPPSLLLLLLSLLSSAMRASRAAVALATSAAMARAHLNASVPSPAIPSSSPAPEEGKEGEKEGRKEGGKEGKLRGRAAVVAKAGEGVRFLLLQETIICKCLLRVAVTLSGGDTAEEEGEEEGGKEGGREGRRRSVEGRGAICLFLSHLLSYHPPVLPLLLRRGELSSPALLLLADCIPAFLLFLPPSLPPSIPPFSLRGTSLVTHARDLAVLAEFIRRYPLPAAFRSAHSAIIALLHRHLRPVVLQGKT 253
The following BLAST results are available for this feature:
BLAST of EWM20957.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100925|gb|EWM20957.1|5.264e-173100.00hypothetical protein Naga_102064g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9747rna9747Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications