EWM20961.1, cds9711 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|585100933|gb|EWM20961.1| (ornithine cyclodeaminase [Nannochloropsis gaditana]) HSP 1 Score: 311.227 bits (796), Expect = 2.127e-107 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MRGIVRRAALHQLRPRLSSSSTIASAMTMRAMATMPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLATELPWVRPPSLPPSLSLPPLSLDLPVCCHSFPRPPHGMYYK 151
MRGIVRRAALHQLRPRLSSSSTIASAMTMRAMATMPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLATELPWVRPPSLPPSLSLPPLSLDLPVCCHSFPRPPHGMYYK
Sbjct: 1 MRGIVRRAALHQLRPRLSSSSTIASAMTMRAMATMPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLATELPWVRPPSLPPSLSLPPLSLDLPVCCHSFPRPPHGMYYK 151
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|1210529218|dbj|GAX12364.1| (hypothetical protein FisN_1Hh297 [Fistulifera solaris]) HSP 1 Score: 115.546 bits (288), Expect = 4.106e-28 Identity = 57/102 (55.88%), Postives = 68/102 (66.67%), Query Frame = 0
Query: 11 HQLRP--RLSSSSTIASAMTMRAMATMPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLA 110
H +R + +S S AS T+ A + P P+ FDY TV L+V A +VE AF LA G+VDVP PMHIG+HET AGPGDCHIKGGY+ G TFTVKLA
Sbjct: 10 HLIRNAGKFTSCSVAASRRTL-ATSAFPAPRLFDYETVTSNLSVADAIESVESAFGALAKGEVDVPMPMHIGIHETAAAGPGDCHIKGGYVSGTKTFTVKLA 110
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|219114779|ref|XP_002178185.1| (ornithine cyclodeaminase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409920|gb|EEC49850.1| ornithine cyclodeaminase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 113.62 bits (283), Expect = 2.285e-27 Identity = 54/84 (64.29%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 27 MTMRAMATMPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLA 110
+ +R A P P+ FDY TV L+V A AVE AF LA G+VDVP PMHIGV ETPTAGPGDCHIKGGY+ G TFTVKLA
Sbjct: 16 LRVRTFAAFPAPRLFDYDTVTSHLSVADAIDAVESAFGALAKGQVDVPMPMHIGVAETPTAGPGDCHIKGGYVLGAPTFTVKLA 99
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|299116973|emb|CBN75077.1| (Ornithine cyclodeaminase [Ectocarpus siliculosus]) HSP 1 Score: 112.849 bits (281), Expect = 4.291e-27 Identity = 53/82 (64.63%), Postives = 59/82 (71.95%), Query Frame = 0
Query: 30 RAMATMPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLAT 111
RA AT+P P+ FDY TV L A AVE AF MLA GKVDVP PMHIG+ E+ AGPGDCHIKGGYI G +T+TVKLA
Sbjct: 46 RAFATVPGPRLFDYDTVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESEKAGPGDCHIKGGYISGTSTWTVKLAN 127
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|1210520148|dbj|GAX21031.1| (hypothetical protein FisN_1Lh297 [Fistulifera solaris]) HSP 1 Score: 111.309 bits (277), Expect = 1.761e-26 Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 0
Query: 33 ATMPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLA 110
+ P P+ FDY TV L+V A +VE AF LA G+VDVP PMHIG+HET +AGPGDCHIKGGY+ G TFTVKLA
Sbjct: 33 SAFPAPRLFDYETVTSNLSVADAIESVEAAFGALAKGEVDVPMPMHIGIHETASAGPGDCHIKGGYVSGTKTFTVKLA 110
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|397640171|gb|EJK73972.1| (hypothetical protein THAOC_04380 [Thalassiosira oceanica]) HSP 1 Score: 109.383 bits (272), Expect = 3.101e-26 Identity = 54/83 (65.06%), Postives = 59/83 (71.08%), Query Frame = 0
Query: 30 RAMAT--MPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLA 110
RA AT P PK FDY TV K L VG A +VE+AF LA GKVDVP PMHIG+ E+ AGPGDCHIKGGY+ TFTVKLA
Sbjct: 16 RAFATSAFPPPKLFDYETVTKNLTVGDAIESVEQAFKALALGKVDVPLPMHIGIEESSVAGPGDCHIKGGYVSATPTFTVKLA 98
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|551540348|ref|XP_005758584.1| (ornithine cyclodeaminase [Emiliania huxleyi CCMP1516] >gi|485606266|gb|EOD06155.1| ornithine cyclodeaminase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 108.997 bits (271), Expect = 9.577e-26 Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 0
Query: 35 MPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLA 110
+P PK FDYATV ++V A +AVE AF LA GKVDVP PMHIG+ ET +AGPGDCHIKGGY+ G++T+TVKLA
Sbjct: 22 IPPPKLFDYATVTSHIHVSDAISAVEAAFGALARGKVDVPFPMHIGIDETASAGPGDCHIKGGYVSGESTWTVKLA 97
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|223993093|ref|XP_002286230.1| (ornithine cyclodeaminase [Thalassiosira pseudonana CCMP1335] >gi|220977545|gb|EED95871.1| ornithine cyclodeaminase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 109.383 bits (272), Expect = 1.043e-25 Identity = 57/109 (52.29%), Postives = 71/109 (65.14%), Query Frame = 0
Query: 2 RGIVRRAALHQLRPRLSSSSTIASAMTMRAMATMPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLA 110
R +RRA + Q P ++S+ + +A+ A + P P+ FDY TV L V A +VEEAF LA GKVDVP PMHIG+ E+ AGPGDCHIKGGY+ TFTVKLA
Sbjct: 7 RQAIRRALVTQ--PLVASAKS--TAVRSFASSGFPPPRLFDYETVTSNLTVADAIESVEEAFKALAKGKVDVPMPMHIGIDESSVAGPGDCHIKGGYVSATPTFTVKLA 111
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|1072230328|gb|OEU15061.1| (NAD(P)-binding protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 105.145 bits (261), Expect = 3.981e-24 Identity = 47/76 (61.84%), Postives = 53/76 (69.74%), Query Frame = 0
Query: 35 MPTPKFFDYATVKKTLNVGQAFTAVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLA 110
P P+ F Y +K L V A +VEEAF LA GKVDVP PMHIG+ E+ AGPGDCHIKGGY+ G TFTVKLA
Sbjct: 39 FPAPRLFSYEQIKSNLTVNDAIPSVEEAFGALAKGKVDVPMPMHIGIEESENAGPGDCHIKGGYVFGAKTFTVKLA 114
BLAST of EWM20961.1 vs. NCBI_GenBank
Match: gi|255077023|ref|XP_002502166.1| (predicted protein [Micromonas commoda] >gi|226517431|gb|ACO63424.1| predicted protein [Micromonas commoda]) HSP 1 Score: 104.375 bits (259), Expect = 2.893e-23 Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 0
Query: 35 MPTPKFFDYATVKKTLNVGQAFT-AVEEAFAMLADGKVDVPQPMHIGVHETPTAGPGDCHIKGGYIEGKTTFTVKLAT 111
+P PK +DY T+K ++ + T +VE+AF+ LA+G+VDVP PMHIG+ ETP AGPGDCHIKGGYIEG T+TVKLA
Sbjct: 190 LPAPKLYDYDTIKSSVAPSRELTESVEDAFSQLANGRVDVPLPMHIGIAETPEAGPGDCHIKGGYIEGAPTWTVKLAN 267 The following BLAST results are available for this feature:
BLAST of EWM20961.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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