EWM20971.1, cds9702 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20971.1 vs. NCBI_GenBank
Match: gi|585100954|gb|EWM20971.1| (hypothetical protein Naga_102070g1 [Nannochloropsis gaditana]) HSP 1 Score: 383.259 bits (983), Expect = 5.996e-135 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query: 1 MKEASAVFAATTAIKMMQENLAKIRYPEDGVTIRWGGGCVPVGLQINHCGFSSIAYLKAVLNAEQQQDIALIQLCLETYLDPMPGRVLPLETVQALWNKDDRFGIFNTERNPETGERYGISLWLKNDPDVREEIMIHFRINMVQYNALQTYISKLYHSPLLEQYVLKTFLKALSPADADMSR 182
MKEASAVFAATTAIKMMQENLAKIRYPEDGVTIRWGGGCVPVGLQINHCGFSSIAYLKAVLNAEQQQDIALIQLCLETYLDPMPGRVLPLETVQALWNKDDRFGIFNTERNPETGERYGISLWLKNDPDVREEIMIHFRINMVQYNALQTYISKLYHSPLLEQYVLKTFLKALSPADADMSR
Sbjct: 1 MKEASAVFAATTAIKMMQENLAKIRYPEDGVTIRWGGGCVPVGLQINHCGFSSIAYLKAVLNAEQQQDIALIQLCLETYLDPMPGRVLPLETVQALWNKDDRFGIFNTERNPETGERYGISLWLKNDPDVREEIMIHFRINMVQYNALQTYISKLYHSPLLEQYVLKTFLKALSPADADMSR 182
BLAST of EWM20971.1 vs. NCBI_GenBank
Match: gi|585104049|gb|EWM23168.1| (uncharacterized protein Naga_100043g43 [Nannochloropsis gaditana]) HSP 1 Score: 138.658 bits (348), Expect = 1.402e-34 Identity = 71/178 (39.89%), Postives = 103/178 (57.87%), Query Frame = 0
Query: 1 MKEASAVFAATTAIKMMQENLAKIRYPEDGVTIRWGGGCVPVGLQINHCGFSSIAYLKAVLNAEQQQDIALIQLCLETYLDPMPGRVLPLETVQALWNKDDRFGIFNTERNPETGERYGISLWLKNDPDVREEIMIHFRINMVQYNALQTYISKLYHSPLLEQYVLKTFLKALSPADA 178
+KE + V A A+ M + L ++ P + RWGGGC + CGFS++A + ++ + D+ L+QLC+ T L +PL TV+ LW+ D + I N +R ERYGIS WL D DVR+ I +HF I + QYNAL+ Y+ +Y SP+LE V+K FL++L P DA
Sbjct: 428 LKENAVVMAIQMAVDAMTQILNAMQAPSEATATRWGGGCT-SNMFGKICGFSTVATFFSAVDKRNKMDLNLLQLCINTKL--TEAEQIPLATVRRLWDPTDVYSIMNVDRG-SAAERYGISYWLWGDVDVRDTIAMHFGITIRQYNALRAYLLDIYRSPMLEMAVVKIFLESLPPEDA 601
BLAST of EWM20971.1 vs. NCBI_GenBank
Match: gi|585106442|gb|EWM24842.1| (scavenger receptor class member 2 [Nannochloropsis gaditana]) HSP 1 Score: 81.6481 bits (200), Expect = 5.555e-15 Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 0
Query: 1 MKEASAVFAATTAIKMMQENLAKIRYPEDGVTIRWGGGCVPVGLQINHCGFSSIAYLKAVLNAEQQQDIALIQLCLETYLDPMPGRV 87
+KE + A + ++ E L K+ Y EDG IRWGGGC G+ + CGF A+LKA++ E+++D L +CL+T L PG+V
Sbjct: 334 LKERAVAATAVKTLALIDEALTKLNYQEDGTAIRWGGGCASAGM-VQQCGFEKAAFLKAMIGKERKEDAELYHMCLDTGLGSEPGQV 419 The following BLAST results are available for this feature:
BLAST of EWM20971.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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