EWM20973.1, cds9698 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|585100959|gb|EWM20973.1| (FAS1 domain protein [Nannochloropsis gaditana]) HSP 1 Score: 518.85 bits (1335), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query: 1 MCFGSALATSACLQFYATHGKIQVASFFISSHSFILLLSPKQHIPLPYTMKFLATTLVALAAPALAFMPMARVPATPATALSAVIKAGGDYYPGQVDYGSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSIPVK 254
MCFGSALATSACLQFYATHGKIQVASFFISSHSFILLLSPKQHIPLPYTMKFLATTLVALAAPALAFMPMARVPATPATALSAVIKAGGDYYPGQVDYGSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSIPVK
Sbjct: 1 MCFGSALATSACLQFYATHGKIQVASFFISSHSFILLLSPKQHIPLPYTMKFLATTLVALAAPALAFMPMARVPATPATALSAVIKAGGDYYPGQVDYGSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSIPVK 254
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|499454683|ref|WP_011142147.1| (hypothetical protein [Gloeobacter violaceus] >gi|37521719|ref|NP_925096.1| hypothetical protein glr2150 [Gloeobacter violaceus PCC 7421] >gi|35212717|dbj|BAC90091.1| glr2150 [Gloeobacter violaceus PCC 7421]) HSP 1 Score: 83.5741 bits (205), Expect = 2.556e-16 Identity = 57/150 (38.00%), Postives = 81/150 (54.00%), Query Frame = 0
Query: 104 DVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEK--AGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSI 251
D+ +T + G F L AL+ATGLDK L + G F ++APTDEAF+K G +D LL+DKA L ++L YHV V K + + + T++G V+VQ++ EA +DI A NG IH I +L P GG++
Sbjct: 28 DIVDTAVKAGDFKTLVTALQATGLDKTL-KTKGPFTVFAPTDEAFKKLPPGTLDALLKDKAKLTKILTYHV----VSGKVLSSALKPGSVKTVEGAPVKVQIEGGK-------VEVNEAYVTK--ADITADNGVIHVIDSVLLPPEGGAM 163
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|496315453|ref|WP_009024631.1| (beta-Ig-H3/fasciclin [gamma proteobacterium NOR5-3] >gi|219675082|gb|EED31449.1| beta-Ig-H3/fasciclin [gamma proteobacterium NOR5-3]) HSP 1 Score: 82.4185 bits (202), Expect = 2.489e-14 Identity = 53/145 (36.55%), Postives = 75/145 (51.72%), Query Frame = 0
Query: 105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQA 247
+ E + G F L ALEATGLD+ L+ E F ++APTD AFE G +D LL D L ++L YHV+ D E S + G + ++ DG F+ NG A+ + ++D++A NG IH I +LTP A
Sbjct: 51 IVEVAVEAGDFTTLVAALEATGLDQTLSDEAATFTVFAPTDAAFEALGQDTIDGLLGDTDTLSDILLYHVLSGQAVDAETALSLAGTTIEMANGDIAALTIR---DGALFI---NG-AEVI--VTDVEASNGIIHAIDAVLTPPA 186 HSP 2 Score: 78.9518 bits (193), Expect = 3.594e-13 Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 0
Query: 113 GKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
G F L AL+ATGLD LA E F ++APTD+AF G ++ LLED L +L YHV+ E + S+ G V V V DG F+ ++Q + ++D++A NG IH I +L P
Sbjct: 343 GSFTTLVAALQATGLDATLADEAATFTVFAPTDDAFALLGEDTINSLLEDTETLSNILLYHVIADQAVPAETALTLNGSDVEMANGDSVTVTVT---DGNLFI----NDSQVI--IADVEASNGIIHAIDAVLMP 468 HSP 3 Score: 62.003 bits (149), Expect = 2.101e-7 Identity = 50/146 (34.25%), Postives = 69/146 (47.26%), Query Frame = 0
Query: 104 DVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQA 247
++ E G F L A++A GLD LA + F ++APTD AF G + LL D L +VL YHV+ D S G V + ++ DG F+ NN +Q V ++D+ A NG IH I +LTP A
Sbjct: 193 NIVEVAVAAGDFTTLVAAVQAAGLDTTLADPDSTFTVFAPTDAAFAMLGEEAIAALLADLDALTDVLLYHVISGAAVDSVTATSLFGEMVEMANGDSVTIDIR---DGALFI--NN--SQVV--IADVPATNGVIHAIDMVLTPPA 329
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|947494190|ref|WP_056158368.1| (hypothetical protein [Duganella sp. Leaf126] >gi|944976746|gb|KQQ32925.1| hypothetical protein ASF61_12570 [Duganella sp. Leaf126]) HSP 1 Score: 77.7962 bits (190), Expect = 3.160e-14 Identity = 57/156 (36.54%), Postives = 79/156 (50.64%), Query Frame = 0
Query: 99 GSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEK--AGGVDKLLEDKAGLEEVLKYHVV--KLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGL----SDIDAVNGHIHGISGILTPQ 246
+ + D+ +T K G FN L A++A GL+ L + G F ++APTD AF K +D LL+DKA L +VL YHVV K+ D + N T++G V+V VK G+A VD +DI A NG IH I +L P+
Sbjct: 16 AAQAADIVDTAKAAGSFNTLVTAVQAAGLESTL-KGPGPFTVFAPTDAAFAKIPKAKLDALLKDKAALTKVLTYHVVPGKVMAAD------VKPGNVKTVEGASVKVAVK-------------GDAVMVDKAHVTKTDIAADNGVIHVIDTVLMPK 151
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|746582869|ref|WP_039611033.1| (adhesin [Pseudoalteromonas luteoviolacea] >gi|743397141|gb|KID56483.1| adhesin [Pseudoalteromonas luteoviolacea]) HSP 1 Score: 79.7221 bits (195), Expect = 2.097e-13 Identity = 52/143 (36.36%), Postives = 71/143 (49.65%), Query Frame = 0
Query: 105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
VY+ K G FN L AL+ATGL+ L N F ++APTD AFE G +D LL D L ++L YHV+ V + I S AT+ G K+ + + G+ ++ Q +DI NG IH I +LTP
Sbjct: 40 VYDAAKAAGSFNTLVAALDATGLNATLDDTNNKFTVFAPTDAAFELLGTDTIDSLLADTDTLTKILTYHVLSSEVNAETAI-SLAGQTTATVNGAKIALSLS----GDDLLVNTATVTQ-----TDIKTDNGIIHVIDAVLTP 172
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|614462297|gb|AHX39943.1| (putative sensory subunit of low CO2-induced protein complex [Pseudoalteromonas luteoviolacea]) HSP 1 Score: 79.7221 bits (195), Expect = 2.684e-13 Identity = 52/143 (36.36%), Postives = 71/143 (49.65%), Query Frame = 0
Query: 105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
VY+ K G FN L AL+ATGL+ L N F ++APTD AFE G +D LL D L ++L YHV+ V + I S AT+ G K+ + + G+ ++ Q +DI NG IH I +LTP
Sbjct: 67 VYDAAKAAGSFNTLVAALDATGLNATLDDTNNKFTVFAPTDAAFELLGTDTIDSLLADTDTLTKILTYHVLSSEVNAETAI-SLAGQTTATVNGAKIALSLS----GDDLLVNTATVTQ-----TDIKTDNGIIHVIDAVLTP 199
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|554670939|ref|WP_023172842.1| (beta-Ig-H3/fasciclin [Gloeobacter kilaueensis] >gi|553882294|gb|AGY57736.1| beta-Ig-H3/fasciclin [Gloeobacter kilaueensis JS1]) HSP 1 Score: 75.8702 bits (185), Expect = 2.860e-13 Identity = 59/155 (38.06%), Postives = 83/155 (53.55%), Query Frame = 0
Query: 104 DVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEK--AGGVDKLLEDKAGLEEVLKYHVV--KLFVKDKE--HIRSFRLSN-KATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSI 251
D+ +T + G F LAKAL+ TGLDK L + G F ++APTDEAF K G ++ LL+DKA L ++L YHVV K+ D + +++ S + L+G KV V ES+V +DI A NG IH I +L P G ++
Sbjct: 28 DIVDTAVKAGDFKTLAKALKETGLDKTL-KGKGPFTVFAPTDEAFSKLPPGTLEALLKDKAKLSKILTYHVVAGKVLSTDLKSGEVKTVEGSPVEVKLEGSKVEVN-------ESYVTK-----------ADIVADNGVIHVIDKVLLPPTGSAM 163
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|1021757914|ref|WP_063369793.1| (adhesin [Pseudoalteromonas luteoviolacea]) HSP 1 Score: 78.5666 bits (192), Expect = 5.531e-13 Identity = 51/143 (35.66%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
VY+ K G FN L AL+ATGL+ L N F ++APTD AFE G ++ LL D L ++L YHV+ V + E S AT+ G K+ + + G++ ++ Q +DI NG IH I +LTP
Sbjct: 40 VYDAAKAAGSFNTLVAALDATGLNATLDDTNNKFTVFAPTDAAFELLGTDTINSLLADTDTLSKILTYHVLSSEV-NAETAVSLAGQTTATVNGAKIALSLS----GDNLLVNTATVTQ-----TDIKTDNGIIHVIDAVLTP 172
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|1021373624|gb|KZN59184.1| (hypothetical protein N473_03240 [Pseudoalteromonas luteoviolacea CPMOR-1]) HSP 1 Score: 78.5666 bits (192), Expect = 6.563e-13 Identity = 51/143 (35.66%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
VY+ K G FN L AL+ATGL+ L N F ++APTD AFE G ++ LL D L ++L YHV+ V + E S AT+ G K+ + + G++ ++ Q +DI NG IH I +LTP
Sbjct: 67 VYDAAKAAGSFNTLVAALDATGLNATLDDTNNKFTVFAPTDAAFELLGTDTINSLLADTDTLSKILTYHVLSSEV-NAETAVSLAGQTTATVNGAKIALSLS----GDNLLVNTATVTQ-----TDIKTDNGIIHVIDAVLTP 199
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|662569778|gb|KER10897.1| (hypothetical protein HY22_01590 [Chlorobium sp. GBChlB]) HSP 1 Score: 73.1738 bits (178), Expect = 7.584e-13 Identity = 54/138 (39.13%), Postives = 73/138 (52.90%), Query Frame = 0
Query: 111 QTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEK-AGGVDKLLEDKAGLEEVLKYHVV--KLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
+ GKFN L AL+ATGLD LA + G F ++APTDEAF K VD L++D L EVLKYHVV + D ++ T++G + + K DG+ V A V ++D+ NG IH I +L P
Sbjct: 2 KAGKFNTLVAALKATGLDTVLAGK-GPFTVFAPTDEAFAKIQKDVDALMKDPKKLAEVLKYHVVPAQAMAAD-----VAKMPKAKTVEGKDITLVAK---DGKVMV----NSANVV--MADVACTNGVIHAIDAVLMP 124 The following BLAST results are available for this feature:
BLAST of EWM20973.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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