EWM20973.1, cds9698 (CDS) Nannochloropsis gaditana

Overview
NameEWM20973.1
Unique Namecds9698
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:278289..278502 -
Alignment locationKK037255.1:277578..277936 -
Alignment locationKK037255.1:277221..277376 -
Alignment locationKK037255.1:276923..276958 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20973.1
ProductFAS1 domain protein
Orig transcript idgnl|cribi|Naga_100442g3.7158.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:278289..278502 -
KK037255.1supercontigKK037255.1:277578..277936 -
KK037255.1supercontigKK037255.1:277221..277376 -
KK037255.1supercontigKK037255.1:276923..276958 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
Homology
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|585100959|gb|EWM20973.1| (FAS1 domain protein [Nannochloropsis gaditana])

HSP 1 Score: 518.85 bits (1335), Expect = 0.000e+0
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query:    1 MCFGSALATSACLQFYATHGKIQVASFFISSHSFILLLSPKQHIPLPYTMKFLATTLVALAAPALAFMPMARVPATPATALSAVIKAGGDYYPGQVDYGSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSIPVK 254
            MCFGSALATSACLQFYATHGKIQVASFFISSHSFILLLSPKQHIPLPYTMKFLATTLVALAAPALAFMPMARVPATPATALSAVIKAGGDYYPGQVDYGSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSIPVK
Sbjct:    1 MCFGSALATSACLQFYATHGKIQVASFFISSHSFILLLSPKQHIPLPYTMKFLATTLVALAAPALAFMPMARVPATPATALSAVIKAGGDYYPGQVDYGSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSIPVK 254          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|499454683|ref|WP_011142147.1| (hypothetical protein [Gloeobacter violaceus] >gi|37521719|ref|NP_925096.1| hypothetical protein glr2150 [Gloeobacter violaceus PCC 7421] >gi|35212717|dbj|BAC90091.1| glr2150 [Gloeobacter violaceus PCC 7421])

HSP 1 Score: 83.5741 bits (205), Expect = 2.556e-16
Identity = 57/150 (38.00%), Postives = 81/150 (54.00%), Query Frame = 0
Query:  104 DVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEK--AGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSI 251
            D+ +T  + G F  L  AL+ATGLDK L +  G F ++APTDEAF+K   G +D LL+DKA L ++L YHV    V  K    + +  +  T++G  V+VQ++              EA      +DI A NG IH I  +L P  GG++
Sbjct:   28 DIVDTAVKAGDFKTLVTALQATGLDKTL-KTKGPFTVFAPTDEAFKKLPPGTLDALLKDKAKLTKILTYHV----VSGKVLSSALKPGSVKTVEGAPVKVQIEGGK-------VEVNEAYVTK--ADITADNGVIHVIDSVLLPPEGGAM 163          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|496315453|ref|WP_009024631.1| (beta-Ig-H3/fasciclin [gamma proteobacterium NOR5-3] >gi|219675082|gb|EED31449.1| beta-Ig-H3/fasciclin [gamma proteobacterium NOR5-3])

HSP 1 Score: 82.4185 bits (202), Expect = 2.489e-14
Identity = 53/145 (36.55%), Postives = 75/145 (51.72%), Query Frame = 0
Query:  105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQA 247
            + E   + G F  L  ALEATGLD+ L+ E   F ++APTD AFE  G   +D LL D   L ++L YHV+     D E   S   +      G    + ++   DG  F+   NG A+ +  ++D++A NG IH I  +LTP A
Sbjct:   51 IVEVAVEAGDFTTLVAALEATGLDQTLSDEAATFTVFAPTDAAFEALGQDTIDGLLGDTDTLSDILLYHVLSGQAVDAETALSLAGTTIEMANGDIAALTIR---DGALFI---NG-AEVI--VTDVEASNGIIHAIDAVLTPPA 186          

HSP 2 Score: 78.9518 bits (193), Expect = 3.594e-13
Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 0
Query:  113 GKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
            G F  L  AL+ATGLD  LA E   F ++APTD+AF   G   ++ LLED   L  +L YHV+       E   +   S+     G  V V V    DG  F+     ++Q +  ++D++A NG IH I  +L P
Sbjct:  343 GSFTTLVAALQATGLDATLADEAATFTVFAPTDDAFALLGEDTINSLLEDTETLSNILLYHVIADQAVPAETALTLNGSDVEMANGDSVTVTVT---DGNLFI----NDSQVI--IADVEASNGIIHAIDAVLMP 468          

HSP 3 Score: 62.003 bits (149), Expect = 2.101e-7
Identity = 50/146 (34.25%), Postives = 69/146 (47.26%), Query Frame = 0
Query:  104 DVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQA 247
            ++ E     G F  L  A++A GLD  LA  +  F ++APTD AF   G   +  LL D   L +VL YHV+     D     S          G  V + ++   DG  F+  NN  +Q V  ++D+ A NG IH I  +LTP A
Sbjct:  193 NIVEVAVAAGDFTTLVAAVQAAGLDTTLADPDSTFTVFAPTDAAFAMLGEEAIAALLADLDALTDVLLYHVISGAAVDSVTATSLFGEMVEMANGDSVTIDIR---DGALFI--NN--SQVV--IADVPATNGVIHAIDMVLTPPA 329          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|947494190|ref|WP_056158368.1| (hypothetical protein [Duganella sp. Leaf126] >gi|944976746|gb|KQQ32925.1| hypothetical protein ASF61_12570 [Duganella sp. Leaf126])

HSP 1 Score: 77.7962 bits (190), Expect = 3.160e-14
Identity = 57/156 (36.54%), Postives = 79/156 (50.64%), Query Frame = 0
Query:   99 GSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEK--AGGVDKLLEDKAGLEEVLKYHVV--KLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGL----SDIDAVNGHIHGISGILTPQ 246
             + + D+ +T K  G FN L  A++A GL+  L +  G F ++APTD AF K     +D LL+DKA L +VL YHVV  K+   D       +  N  T++G  V+V VK             G+A  VD      +DI A NG IH I  +L P+
Sbjct:   16 AAQAADIVDTAKAAGSFNTLVTAVQAAGLESTL-KGPGPFTVFAPTDAAFAKIPKAKLDALLKDKAALTKVLTYHVVPGKVMAAD------VKPGNVKTVEGASVKVAVK-------------GDAVMVDKAHVTKTDIAADNGVIHVIDTVLMPK 151          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|746582869|ref|WP_039611033.1| (adhesin [Pseudoalteromonas luteoviolacea] >gi|743397141|gb|KID56483.1| adhesin [Pseudoalteromonas luteoviolacea])

HSP 1 Score: 79.7221 bits (195), Expect = 2.097e-13
Identity = 52/143 (36.36%), Postives = 71/143 (49.65%), Query Frame = 0
Query:  105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
            VY+  K  G FN L  AL+ATGL+  L   N  F ++APTD AFE  G   +D LL D   L ++L YHV+   V  +  I S      AT+ G K+ + +     G+  ++      Q     +DI   NG IH I  +LTP
Sbjct:   40 VYDAAKAAGSFNTLVAALDATGLNATLDDTNNKFTVFAPTDAAFELLGTDTIDSLLADTDTLTKILTYHVLSSEVNAETAI-SLAGQTTATVNGAKIALSLS----GDDLLVNTATVTQ-----TDIKTDNGIIHVIDAVLTP 172          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|614462297|gb|AHX39943.1| (putative sensory subunit of low CO2-induced protein complex [Pseudoalteromonas luteoviolacea])

HSP 1 Score: 79.7221 bits (195), Expect = 2.684e-13
Identity = 52/143 (36.36%), Postives = 71/143 (49.65%), Query Frame = 0
Query:  105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
            VY+  K  G FN L  AL+ATGL+  L   N  F ++APTD AFE  G   +D LL D   L ++L YHV+   V  +  I S      AT+ G K+ + +     G+  ++      Q     +DI   NG IH I  +LTP
Sbjct:   67 VYDAAKAAGSFNTLVAALDATGLNATLDDTNNKFTVFAPTDAAFELLGTDTIDSLLADTDTLTKILTYHVLSSEVNAETAI-SLAGQTTATVNGAKIALSLS----GDDLLVNTATVTQ-----TDIKTDNGIIHVIDAVLTP 199          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|554670939|ref|WP_023172842.1| (beta-Ig-H3/fasciclin [Gloeobacter kilaueensis] >gi|553882294|gb|AGY57736.1| beta-Ig-H3/fasciclin [Gloeobacter kilaueensis JS1])

HSP 1 Score: 75.8702 bits (185), Expect = 2.860e-13
Identity = 59/155 (38.06%), Postives = 83/155 (53.55%), Query Frame = 0
Query:  104 DVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEK--AGGVDKLLEDKAGLEEVLKYHVV--KLFVKDKE--HIRSFRLSN-KATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSI 251
            D+ +T  + G F  LAKAL+ TGLDK L +  G F ++APTDEAF K   G ++ LL+DKA L ++L YHVV  K+   D +   +++   S  +  L+G KV V        ES+V             +DI A NG IH I  +L P  G ++
Sbjct:   28 DIVDTAVKAGDFKTLAKALKETGLDKTL-KGKGPFTVFAPTDEAFSKLPPGTLEALLKDKAKLSKILTYHVVAGKVLSTDLKSGEVKTVEGSPVEVKLEGSKVEVN-------ESYVTK-----------ADIVADNGVIHVIDKVLLPPTGSAM 163          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|1021757914|ref|WP_063369793.1| (adhesin [Pseudoalteromonas luteoviolacea])

HSP 1 Score: 78.5666 bits (192), Expect = 5.531e-13
Identity = 51/143 (35.66%), Postives = 72/143 (50.35%), Query Frame = 0
Query:  105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
            VY+  K  G FN L  AL+ATGL+  L   N  F ++APTD AFE  G   ++ LL D   L ++L YHV+   V + E   S      AT+ G K+ + +     G++ ++      Q     +DI   NG IH I  +LTP
Sbjct:   40 VYDAAKAAGSFNTLVAALDATGLNATLDDTNNKFTVFAPTDAAFELLGTDTINSLLADTDTLSKILTYHVLSSEV-NAETAVSLAGQTTATVNGAKIALSLS----GDNLLVNTATVTQ-----TDIKTDNGIIHVIDAVLTP 172          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|1021373624|gb|KZN59184.1| (hypothetical protein N473_03240 [Pseudoalteromonas luteoviolacea CPMOR-1])

HSP 1 Score: 78.5666 bits (192), Expect = 6.563e-13
Identity = 51/143 (35.66%), Postives = 72/143 (50.35%), Query Frame = 0
Query:  105 VYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAG--GVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
            VY+  K  G FN L  AL+ATGL+  L   N  F ++APTD AFE  G   ++ LL D   L ++L YHV+   V + E   S      AT+ G K+ + +     G++ ++      Q     +DI   NG IH I  +LTP
Sbjct:   67 VYDAAKAAGSFNTLVAALDATGLNATLDDTNNKFTVFAPTDAAFELLGTDTINSLLADTDTLSKILTYHVLSSEV-NAETAVSLAGQTTATVNGAKIALSLS----GDNLLVNTATVTQ-----TDIKTDNGIIHVIDAVLTP 199          
BLAST of EWM20973.1 vs. NCBI_GenBank
Match: gi|662569778|gb|KER10897.1| (hypothetical protein HY22_01590 [Chlorobium sp. GBChlB])

HSP 1 Score: 73.1738 bits (178), Expect = 7.584e-13
Identity = 54/138 (39.13%), Postives = 73/138 (52.90%), Query Frame = 0
Query:  111 QTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEK-AGGVDKLLEDKAGLEEVLKYHVV--KLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTP 245
            + GKFN L  AL+ATGLD  LA + G F ++APTDEAF K    VD L++D   L EVLKYHVV  +    D       ++    T++G  + +  K   DG+  V      A  V  ++D+   NG IH I  +L P
Sbjct:    2 KAGKFNTLVAALKATGLDTVLAGK-GPFTVFAPTDEAFAKIQKDVDALMKDPKKLAEVLKYHVVPAQAMAAD-----VAKMPKAKTVEGKDITLVAK---DGKVMV----NSANVV--MADVACTNGVIHAIDAVLMP 124          
The following BLAST results are available for this feature:
BLAST of EWM20973.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100959|gb|EWM20973.1|0.000e+0100.00FAS1 domain protein [Nannochloropsis gaditana][more]
gi|499454683|ref|WP_011142147.1|2.556e-1638.00hypothetical protein [Gloeobacter violaceus] >gi|3... [more]
gi|496315453|ref|WP_009024631.1|2.489e-1436.55beta-Ig-H3/fasciclin [gamma proteobacterium NOR5-3... [more]
gi|947494190|ref|WP_056158368.1|3.160e-1436.54hypothetical protein [Duganella sp. Leaf126] >gi|9... [more]
gi|746582869|ref|WP_039611033.1|2.097e-1336.36adhesin [Pseudoalteromonas luteoviolacea] >gi|7433... [more]
gi|614462297|gb|AHX39943.1|2.684e-1336.36putative sensory subunit of low CO2-induced protei... [more]
gi|554670939|ref|WP_023172842.1|2.860e-1338.06beta-Ig-H3/fasciclin [Gloeobacter kilaueensis] >gi... [more]
gi|1021757914|ref|WP_063369793.1|5.531e-1335.66adhesin [Pseudoalteromonas luteoviolacea][more]
gi|1021373624|gb|KZN59184.1|6.563e-1335.66hypothetical protein N473_03240 [Pseudoalteromonas... [more]
gi|662569778|gb|KER10897.1|7.584e-1339.13hypothetical protein HY22_01590 [Chlorobium sp. GB... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9729rna9729Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications