EWM20978.1, cds9695 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|585100968|gb|EWM20978.1| (oxygen-independent coproporphyrinogen iii oxidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 290.812 bits (743), Expect = 2.560e-99 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query: 1 MRSLRKRRRRGDHSAPRLLLLLCLVLLLLLPSLSFLPFPPCTPSSLLASPPPTRPSAHSDASPPTPPSLPPSPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREMQAAYRRTAEDGGRAEGGGEGGREGGREG 149
MRSLRKRRRRGDHSAPRLLLLLCLVLLLLLPSLSFLPFPPCTPSSLLASPPPTRPSAHSDASPPTPPSLPPSPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREMQAAYRRTAEDGGRAEGGGEGGREGGREG
Sbjct: 1 MRSLRKRRRRGDHSAPRLLLLLCLVLLLLLPSLSFLPFPPCTPSSLLASPPPTRPSAHSDASPPTPPSLPPSPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREMQAAYRRTAEDGGRAEGGGEGGREGGREG 149
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|873218803|emb|CEM38763.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 89.3521 bits (220), Expect = 6.671e-18 Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 0
Query: 24 LVLLLLLPSLSFLPFPPCTPSSLLASPP----PTRPSAHSDASPPTPPSLPPSPL--PRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREMQAA 124
L L LLL + + PS ++ +PP +RPSA A SL PS PR++Y+H+PFCRRRC+YCDFPI VVGD A A + +E+Y +L REM+A
Sbjct: 5 LHLRLLLITSRLIASVSALPSFIIPTPPLRHGKSRPSARLGAQQSRLHSLRPSSFTQPRSVYVHIPFCRRRCYYCDFPISVVGDSARAQQQQAESYYGVLKREMEAT 111
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|922867396|gb|KOO34041.1| (oxygen-independent coproporphyrinogen iii oxidase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 73.9442 bits (180), Expect = 1.140e-12 Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 72 SPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREM 121
S LPRA+Y+HLPFCRRRCFYCDFPI VGD AAD +E Y LL RE+
Sbjct: 24 SVLPRAIYVHLPFCRRRCFYCDFPIVAVGDRPGAADAAAERYCALLDREL 73
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|551597695|ref|XP_005780930.1| (coproporphyrinogen III oxidase [Emiliania huxleyi CCMP1516] >gi|485633630|gb|EOD28501.1| coproporphyrinogen III oxidase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 73.559 bits (179), Expect = 1.616e-12 Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 0
Query: 69 LPPSPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREMQAA 124
+PP+ PRA Y+HLPFCRRRCFYCDFPI VVG AAD +E Y LL RE+ A+
Sbjct: 1 MPPAT-PRAAYVHLPFCRRRCFYCDFPISVVGSKPGAADAAAERYCALLHREIAAS 55
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|551571030|ref|XP_005771426.1| (coproporphyrinogen III oxidase [Emiliania huxleyi CCMP1516] >gi|485622654|gb|EOD18997.1| coproporphyrinogen III oxidase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 73.559 bits (179), Expect = 1.878e-12 Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 0
Query: 69 LPPSPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREMQAA 124
+PP+ PRA Y+HLPFCRRRCFYCDFPI VVG AAD +E Y LL RE+ A+
Sbjct: 1 MPPAT-PRAAYVHLPFCRRRCFYCDFPISVVGSKPGAADAAAERYCALLHREIAAS 55
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|1027784487|ref|WP_063715848.1| (coproporphyrinogen III oxidase [Leptolyngbya valderiana] >gi|1025914003|gb|OAB62495.1| coproporphyrinogen III oxidase [Leptolyngbya valderiana BDU 20041]) HSP 1 Score: 70.8626 bits (172), Expect = 1.305e-11 Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0
Query: 75 PRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYS-EAYINLLLREMQAA 124
PR+ Y+H+PFCRRRCFYCDFPI VVGD H + + AY+N L E+QA
Sbjct: 6 PRSAYVHVPFCRRRCFYCDFPISVVGDRKHGENSQTVRAYVNWLCAEIQAT 56
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|1098804353|ref|XP_018808048.1| (PREDICTED: uncharacterized protein LOC108981379 [Juglans regia]) HSP 1 Score: 70.0922 bits (170), Expect = 1.378e-11 Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 0
Query: 15 APRLLLLLCLVLLLLLPSLSFLPFPPCTPS--------SLLASPPPTRPSAHSDASPPTP-PSLPPSPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEA--YINLLLREMQAA 124
A L+ + ++ L P S P P TP+ + SPP R +A D P P LPP+ + YIHLPFCR+RC YCDFPI +G ++ D+ YI LL RE+ A
Sbjct: 4 ALHLITIATMLKSTLAPVFSIFPAKPRTPNFVYQVLTNTFTHSPPTVRQNASPDTLTTAPAPQLPPT----SAYIHLPFCRKRCHYCDFPIVALGSSSNQTDDDPRVLNYIQLLCREINAT 120
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|501728779|ref|WP_012626977.1| (coproporphyrinogen III oxidase [Cyanothece sp. PCC 7425] >gi|219863547|gb|ACL43886.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp. PCC 7425]) HSP 1 Score: 70.4774 bits (171), Expect = 1.839e-11 Identity = 34/58 (58.62%), Postives = 39/58 (67.24%), Query Frame = 0
Query: 67 PSLPPSPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREMQAA 124
PS PP LP A YIH+PFCRRRCFYCDFPI VVGD + YI +L +E+Q A
Sbjct: 3 PSSPPD-LPTAAYIHIPFCRRRCFYCDFPISVVGDRSRGETPAINHYIEVLCQEIQLA 59
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|518339256|ref|WP_019509463.1| (radical SAM protein [Pleurocapsa sp. PCC 7319]) HSP 1 Score: 69.707 bits (169), Expect = 3.393e-11 Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 74 LPRALYIHLPFCRRRCFYCDFPIKVVGD-GAHAADEYSEAYINLLLREMQ 122
+P A YIH+PFCRRRC+YCDFPI VVGD G ++A E YI L++++Q
Sbjct: 25 IPTAAYIHIPFCRRRCYYCDFPISVVGDKGVNSAKSMVEDYIAALIKDIQ 74
BLAST of EWM20978.1 vs. NCBI_GenBank
Match: gi|676386471|ref|XP_009036514.1| (hypothetical protein AURANDRAFT_37383 [Aureococcus anophagefferens] >gi|323452628|gb|EGB08501.1| hypothetical protein AURANDRAFT_37383 [Aureococcus anophagefferens]) HSP 1 Score: 69.707 bits (169), Expect = 3.406e-11 Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 68 SLPPSPLPRALYIHLPFCRRRCFYCDFPIKVVGDGAHAADEYSEAYINLLLREMQAAYRRTA 129
+L + PR+LY+HLPFCRRRCFYCDFP+ V G+ + D + Y++LL EM + R A
Sbjct: 17 ALQSTAPPRSLYVHLPFCRRRCFYCDFPVVVAGEASATRDRATARYVDLLEHEMASWDARAA 78 The following BLAST results are available for this feature:
BLAST of EWM20978.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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