EWM20980.1, cds9693 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|585100972|gb|EWM20980.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 775.007 bits (2000), Expect = 0.000e+0 Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0
Query: 1 MHRLESCAYTIRTTAKRPGPQSLPPSTSAYRAASLSSLPPPPPSPPDALLERGGSRASVSTEEDLGSWTEESGGEEEEEGEETDWKVVRTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGFGREVPGEGGGEDGLAVFSFTVGRPRVEFFLPAVLLGEGEGGEMEGKEMHGKEGGRRPGGRTRLPSPHRVTFLFPLVPEDPVAEERLASALGDAFASGPFAGNPVWPFSSLFSTAAGRDRAGSEGSSGSGGAGVGDVPGRGGRRGRRMTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAVAPEEEEEGHECPNGGRHLENLKAVRLPLTMGGTFQGWLRLELRVTLTPL 393
MHRLESCAYTIRTTAKRPGPQSLPPSTSAYRAASLSSLPPPPPSPPDALLERGGSRASVSTEEDLGSWTEESGGEEEEEGEETDWKVVRTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGFGREVPGEGGGEDGLAVFSFTVGRPRVEFFLPAVLLGEGEGGEMEGKEMHGKEGGRRPGGRTRLPSPHRVTFLFPLVPEDPVAEERLASALGDAFASGPFAGNPVWPFSSLFSTAAGRDRAGSEGSSGSGGAGVGDVPGRGGRRGRRMTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAVAPEEEEEGHECPNGGRHLENLKAVRLPLTMGGTFQGWLRLELRVTLTPL
Sbjct: 1 MHRLESCAYTIRTTAKRPGPQSLPPSTSAYRAASLSSLPPPPPSPPDALLERGGSRASVSTEEDLGSWTEESGGEEEEEGEETDWKVVRTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGFGREVPGEGGGEDGLAVFSFTVGRPRVEFFLPAVLLGEGEGGEMEGKEMHGKEGGRRPGGRTRLPSPHRVTFLFPLVPEDPVAEERLASALGDAFASGPFAGNPVWPFSSLFSTAAGRDRAGSEGSSGSGGAGVGDVPGRGGRRGRRMTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAVAPEEEEEGHECPNGGRHLENLKAVRLPLTMGGTFQGWLRLELRVTLTPL 393
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|553195981|ref|XP_005856243.1| (hypothetical protein NGA_2103300, partial [Nannochloropsis gaditana CCMP526] >gi|422292816|gb|EKU20118.1| hypothetical protein NGA_2103300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 162.155 bits (409), Expect = 7.854e-42 Identity = 114/344 (33.14%), Postives = 160/344 (46.51%), Query Frame = 0
Query: 88 VRTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGF-------GREVPGEG-------------GGEDGLAVFSFTVGRPRVEFFLPAVLLGEGEGGEMEGKEMHGKEGGRRPGGRTRLPSPHRVTFLFPLVPEDPVAEERLASALGDAFASGPFAGNPVWPFSSLFSTAAGRDRAGSEGSSGSGGAGVGDVPGRGGRRGRRMTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAVAPEEE-EEGHECPNG----------------GRH-LENLKAVRLPLTMGGTFQGWLRLELRVTLTPL 393
+RTPSYTDR+LTHS+PG+G +LR HYDM DAV LSDHRPV A +TL VD RGF VP EG ++ LA+F+ + P V K G + PH T LFPLV EDP+A ERLAS+LG+ G G FSSL + E SS FPVR +T+ASPRFS+H+L+K+++ +G+++G+ ++P+++ ++ +E +E H P+ G H E+ + LPLT GG+ +GW+ L LR + P+
Sbjct: 163 LRTPSYTDRILTHSMPGKGANLRWRHYDMMDAVPLSDHRPVCAHFTLFVDANCRGFQTFSTPPHSVVPPEGKFSQVDEPLAMQTANKEELALFTVVLSHPHVTL----------------------KGGSNILSNLSAATIPHEATILFPLVSEDPLAAERLASSLGEVIPGGTSHGQS--SFSSL---------SHHEWSS-----------------------------------FPVRLKTLASPRFSEHLLLKVSNDRGKEIGQTIIPLALGISSKEVPQETHLYPSSYANSSLCSFRVDEIVQGLHGNEDNRRFSLPLTKGGSLRGWITLTLRTKIKPI 438
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|585103426|gb|EWM22803.1| (inositol polyphosphate phosphatase-like isoform cra_a [Nannochloropsis gaditana]) HSP 1 Score: 162.54 bits (410), Expect = 4.605e-40 Identity = 127/343 (37.03%), Postives = 172/343 (50.15%), Query Frame = 0
Query: 88 VRTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGF----------------GREVPGEGGGEDGLAVFSFTVGRPRVE-----FFLPAVLLGEGEGGEMEGKEMHGKEGGRRPGGRTRLP---SPHRVTFLFPLVPEDPVAEERLASALGDAF-ASGPFAGNPVWPFSSLFSTAAGRDRAG--SEGSSG----SGGAGVGDVPG----RGGRRGRRMTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAVAP--EEEEEGHECPNGGRHLENLKAVRLPLTMGGTFQGWLRLELRVTLTPL 393
+RTPSYTDR+LTHSLPG+ LR HYDM D V LSDHRPV A L VD +VRGF G + D L +F +GRPR+E LPA+ + EG + K R G + L P+ VT LFPLV EDP+ E+R +LG+A A G + + L ++ G + G S SSG SGG V G +GG+ G + + V W + FP VAS RFS+H+LVK+ D++ +DLG+AV+P+++ +P +E P E VR+ L+ GG F+G L L+L VT+ L
Sbjct: 1151 LRTPSYTDRILTHSLPGKSHYLRWRHYDMADNVALSDHRPVCAALDLTVDRRVRGFQVVSPPPSLPLSLPSYGSRETDKSSLADDLVLFHIYLGRPRLEGRLASSLLPALGVSRDPASAGEGNKT-SKNKSRFGGASSTLKWAGGPYEVTVLFPLVSEDPLVEQRQLCSLGEAIPAFGGSSRGSQGNTADLQNSRTGLSQQGTCSRSSSGAPLHSGGKSQSPVEGSLSHQGGKGGEEVPMGEVKHVPW--ESFPQIMHVVASRRFSEHVLVKIQDSRLQDLGQAVIPIALGFSPGAKEFAASSIIPPFPVMKER---VRVALSSGGVFKGMLTLDLSVTVQAL 1487
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|585103427|gb|EWM22804.1| (inositol polyphosphate phosphatase-like isoform cra_a [Nannochloropsis gaditana]) HSP 1 Score: 161.77 bits (408), Expect = 7.382e-40 Identity = 127/343 (37.03%), Postives = 172/343 (50.15%), Query Frame = 0
Query: 88 VRTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGF----------------GREVPGEGGGEDGLAVFSFTVGRPRVE-----FFLPAVLLGEGEGGEMEGKEMHGKEGGRRPGGRTRLP---SPHRVTFLFPLVPEDPVAEERLASALGDAF-ASGPFAGNPVWPFSSLFSTAAGRDRAG--SEGSSG----SGGAGVGDVPG----RGGRRGRRMTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAVAP--EEEEEGHECPNGGRHLENLKAVRLPLTMGGTFQGWLRLELRVTLTPL 393
+RTPSYTDR+LTHSLPG+ LR HYDM D V LSDHRPV A L VD +VRGF G + D L +F +GRPR+E LPA+ + EG + K R G + L P+ VT LFPLV EDP+ E+R +LG+A A G + + L ++ G + G S SSG SGG V G +GG+ G + + V W + FP VAS RFS+H+LVK+ D++ +DLG+AV+P+++ +P +E P E VR+ L+ GG F+G L L+L VT+ L
Sbjct: 1083 LRTPSYTDRILTHSLPGKSHYLRWRHYDMADNVALSDHRPVCAALDLTVDRRVRGFQVVSPPPSLPLSLPSYGSRETDKSSLADDLVLFHIYLGRPRLEGRLASSLLPALGVSRDPASAGEGNKT-SKNKSRFGGASSTLKWAGGPYEVTVLFPLVSEDPLVEQRQLCSLGEAIPAFGGSSRGSQGNTADLQNSRTGLSQQGTCSRSSSGAPLHSGGKSQSPVEGSLSHQGGKGGEEVPMGEVKHVPW--ESFPQIMHVVASRRFSEHVLVKIQDSRLQDLGQAVIPIALGFSPGAKEFAASSIIPPFPVMKER---VRVALSSGGVFKGMLTLDLSVTVQAL 1419
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|585112176|gb|EWM29605.1| (72 kda inositol polyphosphate 5-phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 161.384 bits (407), Expect = 9.860e-40 Identity = 114/344 (33.14%), Postives = 160/344 (46.51%), Query Frame = 0
Query: 88 VRTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGF-------GREVPGEG-------------GGEDGLAVFSFTVGRPRVEFFLPAVLLGEGEGGEMEGKEMHGKEGGRRPGGRTRLPSPHRVTFLFPLVPEDPVAEERLASALGDAFASGPFAGNPVWPFSSLFSTAAGRDRAGSEGSSGSGGAGVGDVPGRGGRRGRRMTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAVAPEEE-EEGHECPNG----------------GRH-LENLKAVRLPLTMGGTFQGWLRLELRVTLTPL 393
+RTPSYTDR+LTHS+PG+G +LR HYDM DAV LSDHRPV A +TL VD RGF VP EG ++ LA+F+ + P V K G + PH T LFPLV EDP+A ERLAS+LG+ G G FSSL + E SS FPVR +T+ASPRFS+H+L+K+++ +G+++G+ ++P+++ ++ +E +E H P+ G H E+ + LPLT GG+ +GW+ L LR + P+
Sbjct: 1056 LRTPSYTDRILTHSMPGKGANLRWRHYDMMDAVPLSDHRPVCAHFTLFVDANCRGFQTFSTPPHSVVPPEGKFSQVDEPLAMQTANKEELALFTVVLSHPHVTL----------------------KGGSNILSNLSAATIPHEATILFPLVSEDPLAAERLASSLGEVIPGGTSHGQS--SFSSL---------SHHEWSS-----------------------------------FPVRLKTLASPRFSEHLLLKVSNDRGKEIGQTIIPLALGISSKEVPQETHLYPSSYANSSLCSFRVDEIVQGLHGNEDNRRFSLPLTKGGSLRGWITLTLRTKIKPI 1331
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|585102564|gb|EWM22143.1| (endonuclease exonuclease phosphatase family protein [Nannochloropsis gaditana]) HSP 1 Score: 144.821 bits (364), Expect = 4.527e-34 Identity = 125/395 (31.65%), Postives = 166/395 (42.03%), Query Frame = 0
Query: 89 RTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGF----------------------------GREVPGEG----------------GGEDGLAVFSFTVGRPRVEFFLPAVLLGEGEGGEMEGKEMHGKEGG-RRPGGRTR-----------LPSPHRVTFLFPLVPEDPVAEERLASALGDAFASGPFAGNPVWPFSSLFSTAAGRDRAGSEGSSGSGGAGV-----GDVPGRGGRRGRR--MTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAV----APEEEEEGHECPNGGR-----------------------HLENLKAVRLPLTMGGTFQGWLRLELRVTLTPL 393
RTPSYTDR+LTHS+P + R L YD D V SDHRPV A + L+ D +VRGF P EG G LAVF+ ++ RP + P + ++E K G GG RRP G R + P RV LFP+V EDP A ER AS LG A N P + A+ G++G GV P G + RR AS+ R V W + FPVRF+ VAS RFS+HML+K++D++ DLGEA++P+ +A+ EE H P H + R L+ GG F+G+L ++L+V P
Sbjct: 1119 RTPSYTDRILTHSMPAKASQFRWLLYDSADLVGFSDHRPVAAAFELRADERVRGFQTLASVSSSAVAPDGPRLSSISHAPPPSSNVEPQEGNMGPVPKPLSNRTSSQGVWKDLAVFTISMSRPSLRLNSPT-----PQRKKVEHKAFFGGTGGKRRPEGLRRRGSIMVLPEMGVTKPSRVQILFPIVSEDPFAFERKASQLGAALPGLGLEVNE--PGNRENKGASMLKLGGTQGHEQQPPGGVEGPHRASSPSSGSQERRREDAFASSLRTVPW--EDFPVRFQVVASLRFSEHMLLKISDSRNHDLGEAIIPIRIALPHVAGAFSHEERHAMPQSAENEGPFPHPTEIFDVGAGKCHSSVHSKRNHRYRFALSAGGEFKGFLSVDLKVRHRPF 1504
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|553183523|ref|XP_005853914.1| (hypothetical protein NGA_0460910 [Nannochloropsis gaditana CCMP526] >gi|422295150|gb|EKU22449.1| hypothetical protein NGA_0460910 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 88.5817 bits (218), Expect = 6.159e-16 Identity = 76/216 (35.19%), Postives = 110/216 (50.93%), Query Frame = 0
Query: 194 KEGGRRPGGRTRLP---SPHRVTFLFPLVPEDPVAEERLASALGDAF-ASGPFAGNPVWPFSSLFSTAAGRDRAG--SEGSSG----SGGAGVGDVPG----RGGRRGRRMTASARRDVRWGKKGFPVRFETVASPRFSQHMLVKLADAKGRDLGEAVLPVSVAVAPEEEE--EGHECPNGGRHLENLKAVRLPLTMGGTFQGWLRLELRVTLTPL 393
K R PG + L P+ VT LFPLV EDP+ E+R +LG+A A G + + L ++ G + G S SSG SGG V G +GG+ G + + V W + FP VAS RFS+H+LVK+ D++ +DLG+AV+P+++ +P +E P E VR+ L+ GG F+G L L+L VT+ L
Sbjct: 62 KNKSRFPGASSTLKWAGGPYEVTVLFPLVSEDPLVEQRQLCSLGEAIPAFGGSSRGSQGNTADLQNSRTGLSQQGTCSRSSSGAPFHSGGKSQSPVEGSLSHQGGKGGEEVPMGEVKHVPW--ESFPQIMHVVASRRFSEHVLVKIQDSRLQDLGQAVIPIALGFSPGAKEFAASSIIPPFPVMKER---VRVALSSGGVFKGMLTLDLSVTVQAL 272
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|585110784|gb|EWM28400.1| (putative inositol polyphosphate-5-phosphatase inp51p [Nannochloropsis gaditana]) HSP 1 Score: 67.0106 bits (162), Expect = 2.281e-8 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
Query: 89 RTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGFGREVPGEGG 152
R PSYTDR+L HSL GSL L+ Y++CDA+ SDHRPV A + L+++ +V GF R +P G
Sbjct: 52 RVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGF-RTMPSLKG 114
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|553184011|ref|XP_005854011.1| (inositol polyphosphate 5-phosphatase ocrl-1 [Nannochloropsis gaditana CCMP526] >gi|422295049|gb|EKU22348.1| inositol polyphosphate 5-phosphatase ocrl-1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 63.5438 bits (153), Expect = 2.905e-7 Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query: 89 RTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGFG 144
R PSYTDR+L H+LP G + + YDMCDA+ SDHRPVV L+++ + GF
Sbjct: 458 RPPSYTDRILFHALPDVGPRVFIQGYDMCDAITGSDHRPVVCRVDLKLNTDIIGFN 513
BLAST of EWM20980.1 vs. NCBI_GenBank
Match: gi|585109654|gb|EWM27419.1| (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 63.1586 bits (152), Expect = 4.853e-7 Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query: 89 RTPSYTDRVLTHSLPGQGGSLRLLHYDMCDAVELSDHRPVVATYTLQVDGQVRGFG 144
R PSYTDR+L H+LP G + + YDMCDA+ SDHRPVV L+++ + GF
Sbjct: 968 RPPSYTDRILFHALPDVGPRVFIQGYDMCDAITGSDHRPVVCRVDLKLNTDIIGFN 1023 The following BLAST results are available for this feature:
BLAST of EWM20980.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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