EWM20989.1, cds9684 (CDS) Nannochloropsis gaditana

Overview
NameEWM20989.1
Unique Namecds9684
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:236459..237472 -

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Properties
Property NameValue
Protein idEWM20989.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100211g7.3043.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:236459..237472 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|585100985|gb|EWM20989.1| (hypothetical protein Naga_100211g7 [Nannochloropsis gaditana])

HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query:    1 MALCACLPASRPPAFLGSRTTAAGFIIPPFSLDPPNLQSLRRHESRSLRTLRWVESPRPPPRSGGVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEKLITEAGVAQQEEEDNGGLKPKIGGRSGRTGGMEEEYLGPGPGSAMEDDVRWVGYALDENLNCPAVALLDSERGLLYYRRRRRISSPFPPSSSPLKELALALAQALPAQSRRAVGMSDALASLGGAGGTTGMGLAQVLGMSKVEGAVVVRVGPRAVLAVAPPAGGIMRDQAVWVERAAALLEASGLGEG 337
            MALCACLPASRPPAFLGSRTTAAGFIIPPFSLDPPNLQSLRRHESRSLRTLRWVESPRPPPRSGGVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEKLITEAGVAQQEEEDNGGLKPKIGGRSGRTGGMEEEYLGPGPGSAMEDDVRWVGYALDENLNCPAVALLDSERGLLYYRRRRRISSPFPPSSSPLKELALALAQALPAQSRRAVGMSDALASLGGAGGTTGMGLAQVLGMSKVEGAVVVRVGPRAVLAVAPPAGGIMRDQAVWVERAAALLEASGLGEG
Sbjct:    1 MALCACLPASRPPAFLGSRTTAAGFIIPPFSLDPPNLQSLRRHESRSLRTLRWVESPRPPPRSGGVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEKLITEAGVAQQEEEDNGGLKPKIGGRSGRTGGMEEEYLGPGPGSAMEDDVRWVGYALDENLNCPAVALLDSERGLLYYRRRRRISSPFPPSSSPLKELALALAQALPAQSRRAVGMSDALASLGGAGGTTGMGLAQVLGMSKVEGAVVVRVGPRAVLAVAPPAGGIMRDQAVWVERAAALLEASGLGEG 337          
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|551667385|ref|XP_005836453.1| (hypothetical protein GUITHDRAFT_136133 [Guillardia theta CCMP2712] >gi|428180606|gb|EKX49473.1| hypothetical protein GUITHDRAFT_136133 [Guillardia theta CCMP2712])

HSP 1 Score: 89.7373 bits (221), Expect = 7.163e-18
Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0
Query:   77 FYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEKL 150
            FY RPSKA+E GGGF++PGLEGYKL+LA ++L   LLA+NR   PGY P  +Q TSEA+    A+ +L Q+L++KL
Sbjct:   53 FYVRPSKALEKGGGFYVPGLEGYKLKLAVSVLAFSLLAINRVLLPGYQPTINQQTSEAVVVFTALFILIQSLLDKL 128          
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|551571980|ref|XP_005771837.1| (hypothetical protein EMIHUDRAFT_444882 [Emiliania huxleyi CCMP1516] >gi|485623194|gb|EOD19408.1| hypothetical protein EMIHUDRAFT_444882 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 72.0182 bits (175), Expect = 1.678e-10
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   57 PRPPPRSGGVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLA 143
            PR  PR   +    + +   FY RPS A+E GG FF+PGLEG++L+L  A ++ L L  NR   PG  PA+SQL SEA+GA A   LL+
Sbjct:   31 PRAAPRLCDLPQRPRGKSDGFYVRPSAAVEKGGAFFVPGLEGFRLKLLAASVLGLALVANRLASPG-EPASSQLVSEALGAAACAQLLS 118          
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|873225516|emb|CEM23848.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 70.8626 bits (172), Expect = 2.259e-10
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0
Query:   77 FYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEK 149
            FY RPSKA+E+GGGFF+PGLEG++L +A  L   + LA+N       A  Q  +EAIGA A + L+ Q L  +
Sbjct:    4 FYVRPSKALEVGGGFFVPGLEGWRLPVAGGLFFAVCLAVNHLASLEVAIGQTITEAIGAIAVLTLILQGLFRR 76          
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|922869758|gb|KOO35805.1| (hypothetical protein Ctob_011490 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 64.6994 bits (156), Expect = 2.308e-8
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0
Query:   71 KAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEKLI 151
            + ++   Y+RPS A+E GG FF+PGLEG KLR   A ++ + L LNR   PG  P +SQ  SEA+G  + +I+ AQ+  +  +
Sbjct:    5 RKKEDLLYRRPSAALEQGGSFFVPGLEGTKLRTGAAAVLSVGLLLNRILSPG-EPVSSQYVSEALGVFSCLIVFAQSAAQNRV 86          
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|298707713|emb|CBJ26030.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 64.6994 bits (156), Expect = 4.339e-8
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   78 YKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEK 149
            Y+RPS AIE GGGFF+PGLEG+K R    +++L LL+L  +  PG T    QL S+ +   A V L AQAL+++
Sbjct:   89 YRRPSAAIERGGGFFVPGLEGFKARFVLGVVILGLLSLEGFAPPGMT--IFQLVSKLLAGLAGVSLFAQALLDQ 160          
The following BLAST results are available for this feature:
BLAST of EWM20989.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 6
Match NameE-valueIdentityDescription
gi|585100985|gb|EWM20989.1|0.000e+0100.00hypothetical protein Naga_100211g7 [Nannochloropsi... [more]
gi|551667385|ref|XP_005836453.1|7.163e-1856.58hypothetical protein GUITHDRAFT_136133 [Guillardia... [more]
gi|551571980|ref|XP_005771837.1|1.678e-1047.19hypothetical protein EMIHUDRAFT_444882 [Emiliania ... [more]
gi|873225516|emb|CEM23848.1|2.259e-1047.95unnamed protein product [Vitrella brassicaformis C... [more]
gi|922869758|gb|KOO35805.1|2.308e-842.17hypothetical protein Ctob_011490 [Chrysochromulina... [more]
gi|298707713|emb|CBJ26030.1|4.339e-848.65conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9715rna9715Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications