EWM20989.1, cds9684 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|585100985|gb|EWM20989.1| (hypothetical protein Naga_100211g7 [Nannochloropsis gaditana]) HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query: 1 MALCACLPASRPPAFLGSRTTAAGFIIPPFSLDPPNLQSLRRHESRSLRTLRWVESPRPPPRSGGVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEKLITEAGVAQQEEEDNGGLKPKIGGRSGRTGGMEEEYLGPGPGSAMEDDVRWVGYALDENLNCPAVALLDSERGLLYYRRRRRISSPFPPSSSPLKELALALAQALPAQSRRAVGMSDALASLGGAGGTTGMGLAQVLGMSKVEGAVVVRVGPRAVLAVAPPAGGIMRDQAVWVERAAALLEASGLGEG 337
MALCACLPASRPPAFLGSRTTAAGFIIPPFSLDPPNLQSLRRHESRSLRTLRWVESPRPPPRSGGVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEKLITEAGVAQQEEEDNGGLKPKIGGRSGRTGGMEEEYLGPGPGSAMEDDVRWVGYALDENLNCPAVALLDSERGLLYYRRRRRISSPFPPSSSPLKELALALAQALPAQSRRAVGMSDALASLGGAGGTTGMGLAQVLGMSKVEGAVVVRVGPRAVLAVAPPAGGIMRDQAVWVERAAALLEASGLGEG
Sbjct: 1 MALCACLPASRPPAFLGSRTTAAGFIIPPFSLDPPNLQSLRRHESRSLRTLRWVESPRPPPRSGGVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEKLITEAGVAQQEEEDNGGLKPKIGGRSGRTGGMEEEYLGPGPGSAMEDDVRWVGYALDENLNCPAVALLDSERGLLYYRRRRRISSPFPPSSSPLKELALALAQALPAQSRRAVGMSDALASLGGAGGTTGMGLAQVLGMSKVEGAVVVRVGPRAVLAVAPPAGGIMRDQAVWVERAAALLEASGLGEG 337
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|551667385|ref|XP_005836453.1| (hypothetical protein GUITHDRAFT_136133 [Guillardia theta CCMP2712] >gi|428180606|gb|EKX49473.1| hypothetical protein GUITHDRAFT_136133 [Guillardia theta CCMP2712]) HSP 1 Score: 89.7373 bits (221), Expect = 7.163e-18 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0
Query: 77 FYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEKL 150
FY RPSKA+E GGGF++PGLEGYKL+LA ++L LLA+NR PGY P +Q TSEA+ A+ +L Q+L++KL
Sbjct: 53 FYVRPSKALEKGGGFYVPGLEGYKLKLAVSVLAFSLLAINRVLLPGYQPTINQQTSEAVVVFTALFILIQSLLDKL 128
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|551571980|ref|XP_005771837.1| (hypothetical protein EMIHUDRAFT_444882 [Emiliania huxleyi CCMP1516] >gi|485623194|gb|EOD19408.1| hypothetical protein EMIHUDRAFT_444882 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.0182 bits (175), Expect = 1.678e-10 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0
Query: 57 PRPPPRSGGVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLA 143
PR PR + + + FY RPS A+E GG FF+PGLEG++L+L A ++ L L NR PG PA+SQL SEA+GA A LL+
Sbjct: 31 PRAAPRLCDLPQRPRGKSDGFYVRPSAAVEKGGAFFVPGLEGFRLKLLAASVLGLALVANRLASPG-EPASSQLVSEALGAAACAQLLS 118
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|873225516|emb|CEM23848.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 70.8626 bits (172), Expect = 2.259e-10 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 77 FYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEK 149
FY RPSKA+E+GGGFF+PGLEG++L +A L + LA+N A Q +EAIGA A + L+ Q L +
Sbjct: 4 FYVRPSKALEVGGGFFVPGLEGWRLPVAGGLFFAVCLAVNHLASLEVAIGQTITEAIGAIAVLTLILQGLFRR 76
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|922869758|gb|KOO35805.1| (hypothetical protein Ctob_011490 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 64.6994 bits (156), Expect = 2.308e-8 Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0
Query: 71 KAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEKLI 151
+ ++ Y+RPS A+E GG FF+PGLEG KLR A ++ + L LNR PG P +SQ SEA+G + +I+ AQ+ + +
Sbjct: 5 RKKEDLLYRRPSAALEQGGSFFVPGLEGTKLRTGAAAVLSVGLLLNRILSPG-EPVSSQYVSEALGVFSCLIVFAQSAAQNRV 86
BLAST of EWM20989.1 vs. NCBI_GenBank
Match: gi|298707713|emb|CBJ26030.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 64.6994 bits (156), Expect = 4.339e-8 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 78 YKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEK 149
Y+RPS AIE GGGFF+PGLEG+K R +++L LL+L + PG T QL S+ + A V L AQAL+++
Sbjct: 89 YRRPSAAIERGGGFFVPGLEGFKARFVLGVVILGLLSLEGFAPPGMT--IFQLVSKLLAGLAGVSLFAQALLDQ 160 The following BLAST results are available for this feature:
BLAST of EWM20989.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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