EWM21006.1, cds9679 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21006.1 vs. NCBI_GenBank
Match: gi|585101004|gb|EWM21006.1| (Protein of unknown function DUF1997 [Nannochloropsis gaditana]) HSP 1 Score: 1156.35 bits (2990), Expect = 0.000e+0 Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0
Query: 1 MVIPRYHHPTRIDMVAYGKRAVFLELVIVLQLCLVYVNLPVEGFLLRGHGICVSFKCQHKRLPLPYQVLSTHSFFGTHGAAGATENNDVQQNQHCPITDEGPLKSVRQAVRVLNSVLHIMFSAGDVFGMYSSPSASVLAPTFKNKRGGASRADSRWALGRPGRRALESREHRDTSEKSVAKEDIAEEGSEIQKFVSQRDLNSWDVWQGVDQNRHRHSEDERQRRQQRRRKKMTLSTRYTCGVSVANASRLEEYMGLPFDQYSLLDQSFISRVEKGKENPQGNVFRFMVPANELVGLHTVPIVDVRVDVDMSKRQLAITSISSRFVSRATDGTILGTQAVNVLTNNSLAFSTRIKWNRPATTKKYSERVQKGMPIADNLPRDVPYFPLGSPPYIEEESIATDEISRVSGGNFARLRKRIFSRARLVDDQVVQNATRFQSRDANTQLTDQDAEVQQKLSCRAHVEISVEVPPPFSLLPGLILRQGASLILSTLVGTLVNRFMELLIEDYQSWQDQESRVASAGGLIGYNPQRFDERTIEVSESDDDDNGSALLPEPEYMI 558
MVIPRYHHPTRIDMVAYGKRAVFLELVIVLQLCLVYVNLPVEGFLLRGHGICVSFKCQHKRLPLPYQVLSTHSFFGTHGAAGATENNDVQQNQHCPITDEGPLKSVRQAVRVLNSVLHIMFSAGDVFGMYSSPSASVLAPTFKNKRGGASRADSRWALGRPGRRALESREHRDTSEKSVAKEDIAEEGSEIQKFVSQRDLNSWDVWQGVDQNRHRHSEDERQRRQQRRRKKMTLSTRYTCGVSVANASRLEEYMGLPFDQYSLLDQSFISRVEKGKENPQGNVFRFMVPANELVGLHTVPIVDVRVDVDMSKRQLAITSISSRFVSRATDGTILGTQAVNVLTNNSLAFSTRIKWNRPATTKKYSERVQKGMPIADNLPRDVPYFPLGSPPYIEEESIATDEISRVSGGNFARLRKRIFSRARLVDDQVVQNATRFQSRDANTQLTDQDAEVQQKLSCRAHVEISVEVPPPFSLLPGLILRQGASLILSTLVGTLVNRFMELLIEDYQSWQDQESRVASAGGLIGYNPQRFDERTIEVSESDDDDNGSALLPEPEYMI
Sbjct: 1 MVIPRYHHPTRIDMVAYGKRAVFLELVIVLQLCLVYVNLPVEGFLLRGHGICVSFKCQHKRLPLPYQVLSTHSFFGTHGAAGATENNDVQQNQHCPITDEGPLKSVRQAVRVLNSVLHIMFSAGDVFGMYSSPSASVLAPTFKNKRGGASRADSRWALGRPGRRALESREHRDTSEKSVAKEDIAEEGSEIQKFVSQRDLNSWDVWQGVDQNRHRHSEDERQRRQQRRRKKMTLSTRYTCGVSVANASRLEEYMGLPFDQYSLLDQSFISRVEKGKENPQGNVFRFMVPANELVGLHTVPIVDVRVDVDMSKRQLAITSISSRFVSRATDGTILGTQAVNVLTNNSLAFSTRIKWNRPATTKKYSERVQKGMPIADNLPRDVPYFPLGSPPYIEEESIATDEISRVSGGNFARLRKRIFSRARLVDDQVVQNATRFQSRDANTQLTDQDAEVQQKLSCRAHVEISVEVPPPFSLLPGLILRQGASLILSTLVGTLVNRFMELLIEDYQSWQDQESRVASAGGLIGYNPQRFDERTIEVSESDDDDNGSALLPEPEYMI 558
BLAST of EWM21006.1 vs. NCBI_GenBank
Match: gi|551644944|ref|XP_005825262.1| (hypothetical protein GUITHDRAFT_154764 [Guillardia theta CCMP2712] >gi|428169347|gb|EKX38282.1| hypothetical protein GUITHDRAFT_154764 [Guillardia theta CCMP2712]) HSP 1 Score: 68.9366 bits (167), Expect = 6.880e-9 Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 0
Query: 448 QDAEVQQKLSCRAHVEISVEVPPPFSLLPGLILRQGASLILSTLVGTLVNRFMELLIEDYQSWQDQESRVASA 520
+DA Q +L A V++++ PPP SLLPG +LRQ L+L T++ RF +L+ EDY+ W E RV +
Sbjct: 268 KDASSQGQLDLSAEVDVAITFPPPLSLLPGFLLRQACGLVLKAASSTILPRFGQLVAEDYRRWSRNEPRVGGS 340 The following BLAST results are available for this feature:
BLAST of EWM21006.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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