EWM21019.1, cds9677 (CDS) Nannochloropsis gaditana

Overview
NameEWM21019.1
Unique Namecds9677
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:205927..207201 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21019.1
Productwd40 repeat-containing protein
Orig transcript idgnl|cribi|Naga_100081g25.766.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:205927..207201 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|553194606|ref|XP_005855996.1| (wd40 repeat-containing protein [Nannochloropsis gaditana CCMP526] >gi|422293057|gb|EKU20358.1| wd40 repeat-containing protein [Nannochloropsis gaditana CCMP526] >gi|585101017|gb|EWM21019.1| wd40 repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 865.144 bits (2234), Expect = 0.000e+0
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query:    1 MDEVEYRNGCTTRNRPSFALDDSHWSCFTGHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLWECPLLPASGNDVPSGIMTPARVLKRFSGLPGKPNWMVSAVRPCQEAREAGVVCFQIFVATTSAHIAVLNTCLVKQEQ 424
            MDEVEYRNGCTTRNRPSFALDDSHWSCFTGHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLWECPLLPASGNDVPSGIMTPARVLKRFSGLPGKPNWMVSAVRPCQEAREAGVVCFQIFVATTSAHIAVLNTCLVKQEQ
Sbjct:    1 MDEVEYRNGCTTRNRPSFALDDSHWSCFTGHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLWECPLLPASGNDVPSGIMTPARVLKRFSGLPGKPNWMVSAVRPCQEAREAGVVCFQIFVATTSAHIAVLNTCLVKQEQ 424          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|1026978778|ref|XP_016608948.1| (hypothetical protein SPPG_04009 [Spizellomyces punctatus DAOM BR117] >gi|907095244|gb|KND00909.1| hypothetical protein SPPG_04009 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 119.783 bits (299), Expect = 1.361e-26
Identity = 98/308 (31.82%), Postives = 139/308 (45.13%), Query Frame = 0
Query:   16 PSFALDDSHWSCFTGHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDF----------------VEGSMVALLEGGHSTSVAGVSF 307
            PSF L         GH   VL LDL            AS +ASG ED T R+WD+A  + +R   G+ ++N  +S+V F   D L+ A    +   DLR+PG+V+ N    +   A+D IN I++  +R    +A ADDSG VT+ D  LR  +  + F+    E+  TCV F+P   WD+  G    STL  WD S+G        VE                P        S Q  NPP+++ L FS D R +A   G+G V + +                    ++ A L  GHS +V+ V+F
Sbjct:    9 PSFIL--------RGHTAPVLCLDLCSKAT-------ASKVASGAEDGTARVWDIATAKCVRGLRGL-EENTEVSSVCFSGDDLLYVAAGHQVRLFDLRSPGLVL-NQSTQIGVSAEDEINHIALNEKR--TFLATADDSGHVTVTD--LRTTRVFKRFR-QRHENLATCVRFQPNRSWDVWSGGMD-STLIHWDFSKG------CPVE--------------QFPFATSEQSQSAQSVNPPFVHSLEFSPDARLLAAGLGDGSVALLNVSGKKNADAERSTRKGRSSSALKARLMDGHSWAVSAVTF 273          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|673046525|ref|XP_008877223.1| (hypothetical protein H310_12068 [Aphanomyces invadans] >gi|574466995|gb|ETV94020.1| hypothetical protein H310_12068 [Aphanomyces invadans])

HSP 1 Score: 118.242 bits (295), Expect = 2.780e-26
Identity = 93/321 (28.97%), Postives = 138/321 (42.99%), Query Frame = 0
Query:   30 GHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLR-APGIVVKNAVGSLPDIADDMINQISVQARRGSKK-VAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQ-WDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLW 347
            GHK  V  LD+     +        +LASG  DSTCR+WD+ + R  +C    F  +  +++V F     L+AA+   +Y  DLR +P +++  A       ADD IN++ +   +  K  +AV DD G + LL+        +R          C+  AFRPR   +DL  G    S L  W+      G R  +      +  G  DA               Q++NPP+++ L+FS  GR VA A G+G + + DF   S+   L  GH+  V  V F D   A+                    L S GND  + +W
Sbjct:   14 GHKSTVNCLDVCATAPD--------ILASGSTDSTCRVWDLRSRRVAQCVANAFAGD-AVNSVVFASSAELYAASSNQVYLFDLRRSPSLILTEATTIFEPAADD-INRLHIHPMQSKKPWLAVPDDDGSIGLLNMKTHVIHTLRGQH----SSICSAAAFRPRCAGYDLISG-GLDSHLVFWEVRNDGSGGRMRAKLNMQHADTGLGDA--------------TQIWNPPFVHDLAFSTSGRTVAAALGDGSIALIDFASKSVRTKLRSGHNAPVGVVRFFDYNSAEF-------------------LVSAGNDSKVCIW 286          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|1178055289|gb|ORE10705.1| (WD40 repeat-like protein [Rhizopus microsporus var. microsporus])

HSP 1 Score: 110.538 bits (275), Expect = 1.639e-23
Identity = 87/303 (28.71%), Postives = 137/303 (45.21%), Query Frame = 0
Query:   30 GHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRL---FAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVY----DFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRG 325
            GHK  VL+LD      +    +G S LASG ED TCR+WD+   + I+   G+   +  +++V F  K  L   + ++   +Y  DLRA G +      +  + ++D IN I V     +K +A ADD G V ++D        I        +  C    FRP+  WD+  G    S +  WD SRG                    D + ++PTTA       Q+FNPP++  L  + DG++VA + G+  + +       V+ +    L  GH+T V  +SF++      P + AS + G
Sbjct:   11 GHKAPVLTLDY-----SDKTFLGDSTLASGSEDKTCRLWDLRTNKVIK---GIQKLDNPVTSVKFARKSDLPLFYLSSGNKVYVYDLRAEGPLCTMPSKTF-EFSNDEINSIDVN--ENNKFLATADDDGNVNIIDLG---SDKIYKKTTKKHQTICMTTKFRPKKSWDVWSGGMD-SKVYEWDFSRGL--------------PTNIYDMNPEEPTTA-------QMFNPPFVYSLDITNDGKWVAASLGDTTIQMISPPSKKVKSTSKIRLINGHNTMVNCMSFIET-----PNQSASLISG 272          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|669162000|ref|XP_008616562.1| (hypothetical protein SDRG_12275 [Saprolegnia diclina VS20] >gi|530731753|gb|EQC29995.1| hypothetical protein SDRG_12275 [Saprolegnia diclina VS20])

HSP 1 Score: 110.538 bits (275), Expect = 1.692e-23
Identity = 96/336 (28.57%), Postives = 150/336 (44.64%), Query Frame = 0
Query:   55 MLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKK-VAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQ-WDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAA-GAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLWECPLLPASGNDVPSGIMTPARVLKRFSGLPGKPNWMVSAV 387
            +LASG +DST RIWD+   +  +C T  F  +  +S+VAF     L+ A+   +Y  DLR  G++VK A   L   AD+ IN ++V      K  +AV DD G++ +++      K ++T       + C   AFRP+   +DL  G H    L  W+ S G RG       +G + A    +D   DD     +     Q++NPP++  L+F+A GR +A A G+G V + DF   S+   L   H      V F   QG +                    L S  ND  + +W+      S ++  + +M P         L  +PN + + +
Sbjct:   32 LLASGSQDSTVRIWDLRTNKVAQCITQAFAGD-AVSSVAFPSATDLYVASHNQLYTFDLRNAGMIVKEATTILEPAADE-INTLAVHPSHAKKPWLAVPDDEGEIGIVNLQ---TKALQTTLRGQHTNLCMSAAFRPKCAGYDLVTGGHDCQ-LVFWEVS-GDRG-------SGRMRAKLSMQDIIGDD-----ALADGTQMWNPPFVYDLAFNAAGRSLAAALGDGSVVLLDFASRSLQRRLT-AHRAVATCVEFAAWQGKEY-------------------LISAANDATVAIWDYKAAIQSADE--AAVMVP---------LANRPNAIATYI 317          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|397576383|gb|EJK50227.1| (hypothetical protein THAOC_30828 [Thalassiosira oceanica])

HSP 1 Score: 110.923 bits (276), Expect = 5.394e-23
Identity = 130/467 (27.84%), Postives = 188/467 (40.26%), Query Frame = 0
Query:   31 HKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRC----YTGMFDDNQGISAVAF----------LDKDR--------------LFAATKTSIYELDLRAPGIVVKNAVGSLPDIA-------DDMINQISVQ--ARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQF-----------PGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVY-----DFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLWEC--------PLLPAS--------------------GNDVPSG--IMTPARVLKRFSGLPGKPNWMVSAVRPCQEAREAGVVCFQIFVATTSAHIAV 414
            H  E  S D   PQ +       S+L SG ED T R+WD+   +   C      GM  ++  I++V+F           D  R              +F  T   +Y  DLR    V  + +   P           D +NQ+S     + GS  +A ADD+G+V ++D    P K  +T Q            P      +CVAFRPR   D      +  T+ LWD SR +R    + ++                    P A SS Q+ NPPY++ LS+S  GR +A A G+G + +        VE   +    GGH ++VA V F    G     K +S +R +SG +   +L S GND VLN W+         PL P                       ND  +   I +P RVL +      KPNW+      C +A + G +   +FVA TS +I++
Sbjct:   34 HSSERASPDDTSPQHH------PSLLLSGSEDGTARLWDLRTRKTSLCVVVPQNGM--ESNEITSVSFHPSRNDSGNSADSQRGGSSSLLPLLRDCTVFLTTTNKVYGYDLRHHSNVDISPIVKEPHFHLTESFQCTDEVNQLSFSYPGKSGSFHMAAADDAGEVHVVDRV--PMKYEQTLQCEKNASILVHAEPETLGIASCVAFRPRSNGDHLATAGTDCTVKLWDVSRPRRPTSTVRIK--------------------PDAESSTQVCNPPYVHSLSWSPSGRLLAGAVGDGSIAILGVEGRRLVEMGRLTCDHGGHRSAVAAVCFPGF-GLSRGHKVSSKIR-KSGEAEDRLLISAGNDGVLNWWDLGANMVGGGPLDPLQYLPSQEKGGEDETKPREQLIDNDFGNEGLIPSPPRVLFQIQH-GQKPNWIT-----CSKAAD-GALPNSLFVADTSPNISI 461          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|831757512|ref|XP_012749053.1| (hypothetical protein SAMD00019534_112700 [Acytostelium subglobosum LB1] >gi|735849882|dbj|GAM28094.1| hypothetical protein SAMD00019534_112700 [Acytostelium subglobosum LB1])

HSP 1 Score: 109.383 bits (272), Expect = 7.367e-23
Identity = 97/388 (25.00%), Postives = 163/388 (42.01%), Query Frame = 0
Query:   28 FTGHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLWECPLLPASGNDVPSGIMTPARVLKRFSGLPGKPNWMVSAVRPCQEAREAGVVCFQIFVATTSAHIAVL 415
              GHK  VL + +    +         +LAS  ED T R+WD     +I+C      D   +++V F +   L+ +  T +   D+R P I++K   G    + ++ INQIS   +   + +A  DDSG++ ++D +    K   T       + C+ V FRP  + +L  G    S +  WD  +G+   R    +A   +++ AKD                Q+ NPP++N L  S+DG+ VAV  G+G++ V +      +  LE  H   ++ V F   +  +                    L S  ND ++ LW       +  D P   +   + ++ ++    K NW+ +A    Q        C  I+VA TS  I +L
Sbjct:   43 LKGHKDSVLCVAIHPTNK---------LLASSSEDCTVRLWDTDKKSSIKCINDFGTD--PVNSVVFNNDYMLYCSHSTKVSCYDIRKPNIILKEHSGQFS-VNNEEINQISFDHKY--QYIAAGDDSGQIKIVDITNNKNKLHSTLA-KKHTNVCSSVLFRPNSKNELLTGSMDYSIIH-WDYLKGKVLHRESFQQATQQTSSSAKDK------QQQQQPQQKQILNPPFVNSLDVSSDGKQVAVGLGSGDIVVNEISSFRRIIHLEEAHQAPISQVHFPKFENHNNS------------------LISSANDSLIILWNIE----NTKDEP---IDNDKRIRIWTHHHSKVNWLTTAKITGQ--------C--IYVADTSNDITML 373          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|727135886|emb|CEG81095.1| (hypothetical protein RMATCC62417_15335 [Rhizopus microsporus])

HSP 1 Score: 108.227 bits (269), Expect = 1.228e-22
Identity = 86/303 (28.38%), Postives = 136/303 (44.88%), Query Frame = 0
Query:   30 GHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRL---FAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVY----DFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRG 325
            GHK  VL+LD      +    +G S LASG ED TCR+WD+   +  +   G+   +  +++V F  K  L   + ++   +Y  DLRA G +      +L + ++D IN I V     +K +A ADD G V ++D        I        +  C    FRP+  WD+  G    S +  WD SRG                    D + ++PTTA       Q+FNPP++  L  + DG++VA + G+  + +        + +    L  GH+T V  +SF++      P + AS + G
Sbjct:   11 GHKAPVLTLDY-----SDKTFLGDSTLASGSEDKTCRLWDLRTNKVTK---GIQKLDNPVTSVKFARKSDLPLFYLSSGNKVYVYDLRAEGPLCTMPSKTL-EFSNDEINSIDVN--ENNKFLATADDDGNVNIIDLG---SDKIYKKTTKKHQTICMTTKFRPKKSWDVWSGGMD-SKVYEWDFSRGL--------------PTNIYDMNPEEPTTA-------QMFNPPFVYSLDITNDGKWVAASLGDTTIQMISPPSKKAKSTSKIRLINGHNTMVNCMSFIET-----PNQSASLISG 272          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|1160557685|ref|XP_020434470.1| (WD40 repeat-containing protein [Polysphondylium pallidum PN500] >gi|281208175|gb|EFA82353.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500])

HSP 1 Score: 108.997 bits (271), Expect = 1.432e-22
Identity = 80/321 (24.92%), Postives = 144/321 (44.86%), Query Frame = 0
Query:   28 FTGHKGEVLSLDLLGPQENGSAVMGASMLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKKVAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQWDLACGFHSTSTLGLWDSSRGQRGCRAISVEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLWE 348
            F GHK  V+ +         +  +   +LAS  +D T R+WD+  G  I+C      + + ++++AF  ++ ++ A    I   DLR   +++K +V  L     + INQI+  ++   + +A  DDSG + ++D  ++  K   T +     + C+   FRP  + +L  G +    +  WD  + +   R    +A  + +A  K+                Q+ NPP+++ L  S DG+ +A+  G+G++ + D    S   LL+  HS  ++ V F             SG  G    S   +L S GND  + LW+
Sbjct:   38 FKGHKDSVVFV---------TTHLNKPILASSSDDCTVRLWDIDRGSVIKCINNF--NGEPVNSIAFDKENLIYCAHSNKITCFDLRNDSLILKESVNQLQ-FNTEEINQITFDSKF--QYMASCDDSGAIKIID--IQKNKLCETLK--KHTNVCSNALFRPNSKNELISGSYDYCVIQ-WDYLKAKLIRRESFQQASHVLSAKQKEKQQR------------QILNPPFVHSLDLSHDGKLMAIGLGSGDIAINDISSFSTHLLLDSAHSAPLSQVHF----------PRFSGSAGSLDNSNSHLLLSAGNDSNIILWD 317          
BLAST of EWM21019.1 vs. NCBI_GenBank
Match: gi|698822223|ref|XP_009844140.1| (hypothetical protein H257_17154 [Aphanomyces astaci] >gi|574100792|gb|ETV66365.1| hypothetical protein H257_17154 [Aphanomyces astaci])

HSP 1 Score: 107.457 bits (267), Expect = 1.669e-22
Identity = 83/296 (28.04%), Postives = 129/296 (43.58%), Query Frame = 0
Query:   55 MLASGGEDSTCRIWDVAAGRAIRCYTGMFDDNQGISAVAFLDKDRLFAATKTSIYELDLRAPGIVVKNAVGSLPDIADDMINQISVQARRGSKK-VAVADDSGKVTLLDASLRPPKPIRTFQFPGGEDFCTCVAFRPRVQ-WDLACGFHSTSTLGLWDSSRGQRGCRAIS-VEAGSLSAAGAKDADADDPTTAPSAVSSCQLFNPPYINGLSFSADGRFVAVAKGNGEVGVYDFVEGSMVALLEGGHSTSVAGVSFLDVQGADLPGKGASGVRGRSGRSGPFILASVGNDRVLNLW 347
            +LASG +DSTCR+WD+ + R  +C    F  +  +++V F     L+ A++  +Y  DLR    ++     ++ + A D IN + V      K  + V DD G + LL+        +R          C+  AFRPR   +DL  G    S L  W+      G R  S ++   L   G                 + Q++NPP++  ++FSA G+ VA A G+G + + DF   S+   L GGH   V  V F D                   RS  +++ S GND  + +W
Sbjct:   30 ILASGSDDSTCRVWDLRSRRVSQCIAHAFAGDP-VNSVVFASSVELYVASRNQVYMFDLRHSSSLILTDATTIFEPAADDINCLHVHPMSNKKPWLVVPDDEGDIGLLNMQTHAIHTLRGQH----SSICSAAAFRPRCGGYDLVSG-GLDSQLLFWEVRSDGSGGRVRSKIDMQHLETLG----------------DATQIWNPPFVYDVAFSATGKTVAAALGDGSIALVDFASKSIAQHLRGGHHAPVGVVQFFDF------------------RSTEYVI-SAGNDSKVCIW 284          
The following BLAST results are available for this feature:
BLAST of EWM21019.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553194606|ref|XP_005855996.1|0.000e+0100.00wd40 repeat-containing protein [Nannochloropsis ga... [more]
gi|1026978778|ref|XP_016608948.1|1.361e-2631.82hypothetical protein SPPG_04009 [Spizellomyces pun... [more]
gi|673046525|ref|XP_008877223.1|2.780e-2628.97hypothetical protein H310_12068 [Aphanomyces invad... [more]
gi|1178055289|gb|ORE10705.1|1.639e-2328.71WD40 repeat-like protein [Rhizopus microsporus var... [more]
gi|669162000|ref|XP_008616562.1|1.692e-2328.57hypothetical protein SDRG_12275 [Saprolegnia dicli... [more]
gi|397576383|gb|EJK50227.1|5.394e-2327.84hypothetical protein THAOC_30828 [Thalassiosira oc... [more]
gi|831757512|ref|XP_012749053.1|7.367e-2325.00hypothetical protein SAMD00019534_112700 [Acytoste... [more]
gi|727135886|emb|CEG81095.1|1.228e-2228.38hypothetical protein RMATCC62417_15335 [Rhizopus m... [more]
gi|1160557685|ref|XP_020434470.1|1.432e-2224.92WD40 repeat-containing protein [Polysphondylium pa... [more]
gi|698822223|ref|XP_009844140.1|1.669e-2228.04hypothetical protein H257_17154 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9708rna9708Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications