EWM21002.1, cds9672 (CDS) Nannochloropsis gaditana

Overview
NameEWM21002.1
Unique Namecds9672
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:195300..196709 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21002.1
Productconserved c2h2 zinc finger protein
Orig transcript idgnl|cribi|Naga_100081g19.749.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:195300..196709 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
Homology
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|585101000|gb|EWM21002.1| (conserved c2h2 zinc finger protein [Nannochloropsis gaditana])

HSP 1 Score: 952.584 bits (2461), Expect = 0.000e+0
Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0
Query:    1 MEPREAPGDPRGSHRAGMGQQKVSFFQSLIRHLVLDLADCCPPNGAQERHQFKSKDELDAYLRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGPGQQAGERTEAHSSDPPLWRDQPRDGCSNPVKDERQELFARKVNGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYTSQALTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFFLLCSANWGSGGYLMAFPKKDERLGQTLAYDLRLGGYNGEERGKAALFEIVDCESYRTTDVVTEIIQKKTPAELAAEEERKRRGSLISLGALRTG 469
            MEPREAPGDPRGSHRAGMGQQKVSFFQSLIRHLVLDLADCCPPNGAQERHQFKSKDELDAYLRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGPGQQAGERTEAHSSDPPLWRDQPRDGCSNPVKDERQELFARKVNGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYTSQALTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFFLLCSANWGSGGYLMAFPKKDERLGQTLAYDLRLGGYNGEERGKAALFEIVDCESYRTTDVVTEIIQKKTPAELAAEEERKRRGSLISLGALRTG
Sbjct:    1 MEPREAPGDPRGSHRAGMGQQKVSFFQSLIRHLVLDLADCCPPNGAQERHQFKSKDELDAYLRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGPGQQAGERTEAHSSDPPLWRDQPRDGCSNPVKDERQELFARKVNGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYTSQALTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFFLLCSANWGSGGYLMAFPKKDERLGQTLAYDLRLGGYNGEERGKAALFEIVDCESYRTTDVVTEIIQKKTPAELAAEEERKRRGSLISLGALRTG 469          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|1210515010|dbj|GAX25973.1| (hypothetical protein FisN_4Hh543 [Fistulifera solaris])

HSP 1 Score: 122.094 bits (305), Expect = 1.051e-26
Identity = 120/435 (27.59%), Postives = 192/435 (44.14%), Query Frame = 0
Query:   45 GAQERHQFKSKDELDAYLRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRT-STWLADRRAGLRGPG--QQAGERTEAHSSDPPLWR----DQPRDG----CSNPVKDERQELFARKVNGETADARLK--RAH--VAGQGPQSLSEVARMQ-------------------------------DEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYTSQA-LTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEV--DWRRPEGAFFLLC-SANWGSGGYLMAFPKKDERLGQTLAYDLRLGGYNGEERGKAALFEIVDCES 429
            G Q  H    +++     R A E++ IGR TL  V  Q E LDR+E++ D  +Y ++K+ R LRGMTW G L N F+++   P   T ST +A        P   + A +  + + ++  +      D+ R+     C +       +L   + N  + +A +   R+H  +  +  QSL++  R Q                               + +L+ + KSL E   I  TL  A+ +Q   +D L+  ++ + + +R V R+A R  + +  W   +P     V+ R + SG +LSV    L LQ         F+ +  Q  + GL++  S +WLGQ  + G +       G+ EEWE   DW    G   LLC S  WG+GGYL+           T    +RLGG   EER  A L+ I + ++
Sbjct:   15 GQQFSHDLSFEEDCQNAQRAAVETLHIGRATLEQVHQQGEQLDRAESIADETQYRLDKAGRILRGMTWSGWLANKFTKDIGPPPAVTRSTPIAPPLVYENVPDSCRAAAQAIQNYHANVKVLEACETDEQRETLLLICQSMYSSAMTQLDELEKNRASVEAYVTEFRSHLTILHEKEQSLNQSMRQQKISFEKNRAELLKGHSNSSTSSATDAHLQLQENHLDMISKSLGEIGMISHTLASAIGQQAQTIDSLDEKADHITEKSRMVTRRADRLIQNK-SWTPVKPTFACHVSIRHLESGRYLSVHEGNLVLQTTFHESTGVFSLWKRQGEIFGLKNKESGRWLGQSML-GGISCSAYDFGRREEWEADSDW----GKSRLLCTSVGWGAGGYLLV---------NTHNLSVRLGGCGVEERKTADLWCITNLDT 434          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|669148726|ref|XP_008609925.1| (hypothetical protein SDRG_05956 [Saprolegnia diclina VS20] >gi|530738262|gb|EQC36504.1| hypothetical protein SDRG_05956 [Saprolegnia diclina VS20])

HSP 1 Score: 114.005 bits (284), Expect = 1.893e-24
Identity = 113/388 (29.12%), Postives = 179/388 (46.13%), Query Frame = 0
Query:   56 DELDAYLRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGPGQQAGERTE---------AHSSDPPLWRDQPRDGCSNPVK--DERQELFARKVNGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLS-VAGEELRLQEPNMSKACQFAAYT---SQALTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFFLLCSANWGSGGYLMAFPKKDERLGQTLAYDLRLGGYNGEERGKAALFEIVDCE 428
            D+  A LR+  E+VAI RE  +A+  Q E LD++E  +D  ++V+E++   +RGM+W G L N F++EP    P  S    +   G   P  +  + ++         AH+S P           S P K  D++ ++FA   NG T +                      Q  YL +LG  L E +   + +   L  Q  Q+DR+EA SE  +D  R V    A+A++         P+     AF+E+ +  F++ V G+ L  ++   S  C F AYT   S  + G +S  S  +LG + + GA+ ++G GL   E++ +D  RPE   F   S  +G GG++   P  D  L     + +R    N   +  AALF++V  E
Sbjct:   11 DKYRASLRLNAETVAISREVASALVMQSEQLDQTETALDVTQHVVEQANYVVRGMSWSGWLANKFAKEPSLAHPPASAPSKEIAMGFICPECRVAQVSQHALMEHYEAAHTSLPA--------TASLPSKRSDDQDDVFASD-NGLTKE----------------------QAAYLAALGPQLLELKHASKGISNHLDMQLAQIDRIEAKSEKTKDDMRLV---TAKATKLTSSLLTISPQFR--CAFQELTTQKFVANVNGDPLVCKDA-ASADCLFRAYTLADSTDMWGFKSESSGLFLGLNAL-GAMRIQGAGLKSYEQFAIDVSRPETTLFSFASC-FGLGGWVSMRP--DGSL-----FCVRRTSTN---KDLAALFKLVRVE 349          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|219110469|ref|XP_002176986.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411521|gb|EEC51449.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 112.849 bits (281), Expect = 5.223e-24
Identity = 69/224 (30.80%), Postives = 114/224 (50.89%), Query Frame = 0
Query:  206 PQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYTSQA-LTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEV--DWRRPEGAFFLLCSANWGSGGYLMAFPKKDERLGQTLAYDLRLGGYNGEERGKAALFEIVD 426
            P     V + QD++L+++ +SL E   I + L ++  +Q   +D+L+  S+ + + ++ V R+A R  + +  W   +P     V  R V SG +L+VA  +L L      + C FA +  Q  + GL++  + KW+GQ+ + G+L    +  G+ EEWE   DW     +  L  SA WG+GGYL   P           + + +GGY  EER KA  + IV+
Sbjct:  149 PSPCDIVRQRQDQHLDTISQSLGELGSIAQNLKQSFQQQNETIDKLDTKSDNILEKSKMVTRRADRIIQKK-SWTPVKPTFACMVTIRHVSSGKYLAVADTDLNLVPKRHPETCVFALWKRQGEIFGLKNKFNNKWVGQN-LFGSLACSASSFGRREEWEAEEDW---TNSRILCASAGWGAGGYLNVRPTD---------HGIVIGGYGFEERKKADAWSIVE 358          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|676390215|ref|XP_009038386.1| (hypothetical protein AURANDRAFT_71858 [Aureococcus anophagefferens] >gi|323451284|gb|EGB07162.1| hypothetical protein AURANDRAFT_71858 [Aureococcus anophagefferens])

HSP 1 Score: 114.39 bits (285), Expect = 2.863e-23
Identity = 127/396 (32.07%), Postives = 180/396 (45.45%), Query Frame = 0
Query:   11 RGSHRAGMGQQKVSFFQSLIRHLVLDLADCCPPNGA--QERHQFKSKDEL-DAYLRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGPGQQAGERTEAHSSDPPLWRDQPRDGCSNPVKDERQELFARKVNGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQE--PNMSKACQFAAYTSQA-LTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDW--RRPEGAFFLLCSANWGSGGYLMAFPKKDERL 398
            RG  RAG   + VS   +    +VL +A   PP  A  Q+ H    KD    A L  A+E    GR  LT +  Q EAL R+E V DSN+YVI+KS R +  MTW G LRN F+  P+   P  +                     +   +    WR    D        ER  LFA          R K       G  +L+E    QD Y+ +L + L++ RG+G  L + L++   +V RL+   + L   TR V R A R + A  G     P+L   VA RE+ +  +L   G+++ L E    +   C+FA Y  +A L GL+S +S K+L   + SGA+    +  G   EW++D   R  +G+  +   ANWG G +    P KD RL
Sbjct:    8 RGIDRAG---EHVSRLMTEEDRVVLSIA---PPRAAEQQQPHGVIVKDRSGTAALDEAYEH---GRSALTRLGEQGEALHRAEVVADSNQYVIDKSRRVVANMTWSGWLRNKFTALPKPAAPPPA--------------PAGAAPGDRRDAAAAAWRGHGADAA------ERSALFAGARGAAAPAPRSK-------GEAALAE----QDAYVNALSEGLEDLRGVGEALGDELADHDDRVPRLQDKMDRLWSTTRQVTRAAGRLTHASAG---STPKLLGHVALRELATKRYLRARGQDVGLSEEVDVLRATCRFALYEKRAHLLGLRSPVSGKYLAITF-SGAIECASSRFGGWAEWDLDLSPRGVKGSPLVCLGANWGGGSFCRVHP-KDGRL 358          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|673035752|ref|XP_008871837.1| (hypothetical protein H310_08019 [Aphanomyces invadans] >gi|574472276|gb|ETV99281.1| hypothetical protein H310_08019 [Aphanomyces invadans])

HSP 1 Score: 105.916 bits (263), Expect = 2.346e-21
Identity = 95/336 (28.27%), Postives = 161/336 (47.92%), Query Frame = 0
Query:   62 LRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGPGQQAGERTEAHSSDPPLWRDQPRDGCSNPVKDERQ-----ELFARKVNGETADARLKRA-HVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYT---SQALTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFFLLCSANWGSGGYL 388
            LR   E++ I RET  A++ Q EALDR+E  +D     ++++   +RGMTW G L N F++EP   RP  ST   D   G   P  +  +R++    +   +     DG S+  +D +Q     ELFA   +    ++  +R+ +V  +G      +   Q  +L++L   L E +   R +  AL     Q+DR++A SE  +D  R V  KA + + +     A+    ++  A +E +S  FL+V   +        S++C F A+T   +  + G Q   S +WLG +   G++  +G  L   E++ +D  R     +   S  +G+GG+L
Sbjct:   27 LRTTAETLNIARETAVALSQQSEALDRAERNLDLTETTVKQANHVVRGMTWSGWLYNKFTKEPSLSRPLPST---DISMGFICPECRVAQRSQHGLLEH--YASMHGDGPSSSPQDSQQRQSIRELFASSSSQTHDNSTSQRSGNVDDEG------LNPDQRAFLDALAPQLLEMKHASRAIGNALDHHNAQLDRIDAKSEKTKDDLRLVTAKAVKLTSSSMTIDAQ----FR-CALQEQQSRRFLTVVNGDPTFSMDTASESCIFRAFTLTGNAEVWGFQHEQSMRWLGLNMF-GSVKAQGEALRSYEQFALDTGREWTTLYSFAS-TFGNGGWL 344          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|813199766|ref|XP_012209454.1| (hypothetical protein SPRG_14942 [Saprolegnia parasitica CBS 223.65] >gi|641525377|gb|KDO19842.1| hypothetical protein SPRG_14942 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 104.76 bits (260), Expect = 3.833e-21
Identity = 107/384 (27.86%), Postives = 173/384 (45.05%), Query Frame = 0
Query:   56 DELDAYLRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGP-------GQQA-GERTEAHSSDPPLWRDQPRDGCSNPVKDERQELFARKVNGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYT---SQALTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFFLLCSANWGSGGYLMAFPKKDERLGQTLAYDLRLGGYNGEERGKAALFEIVDCE 428
            D+  A LR+  E+VAI R+  +A+  Q E LD++E  +D  + V+ ++   +RGM+W G L N FS EP    P  S    +   G   P        Q+A  E  E+  + PP     P +G      +++ +++A   NG T +                      Q  YL +LG  L E +   + +   L  Q  Q+DR+EA SE  +D  R V    A+A++         P+     AF+E+ +  F++    +  + +   S  C F A+T   S  + G +S  S  +LG + + GA+ ++G GL   E++ +D  RPE   F   S  +G GG++   P  D  L     + +R    N   +  AALF++V  E
Sbjct:   14 DKYRASLRLNAETVAISRDVASALVMQSEQLDQTETALDVTQQVVGQANYVVRGMSWSGWLANKFSREPTVVLPHASAPSKEIAMGFICPECRVAQVSQRALMEHYESAHASPPATAFLPSNGSG----EDQGDVYASD-NGLTKE----------------------QAAYLAALGPQLLELKHASKGISNHLDMQLAQLDRIEAKSEKTKDDMRLV---TAKATKLTSSLLTISPQFR--CAFQELTTRKFVANVNGDPVVCKDAASADCLFRAFTLADSTDMWGFRSESSGLFLGINAL-GAMRIQGAGLKSYEQFAIDVSRPETTLFSFASC-FGLGGWVSMRP--DGSL-----FCIRRTSTN---KDMAALFKLVRVE 353          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|1210516919|dbj|GAX24408.1| (hypothetical protein FisN_4Lh543 [Fistulifera solaris])

HSP 1 Score: 101.679 bits (252), Expect = 9.543e-20
Identity = 78/255 (30.59%), Postives = 121/255 (47.45%), Query Frame = 0
Query:  179 RQELFARKVNGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYTSQA-LTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVD--WRRPEGAFFLLC-SANWGSGGYLMAFPKKDERLGQTLAYDLRLGGYNGEERGKAALFEIVDCES 429
            R EL  R+ NG ++ A    AH+            ++Q+ +L+ + KSL E   I  TL  A+ +Q   +D L+  ++ + + +R V R+A R  + +  W   +P     V+ R + SG +LSV    L LQ         F+ +  Q  + GL++  S +WLGQ  + G +       G+ EEWE D  W        LLC S  WG+GGYL+           T  + +RLGG   EER KA L+ I + ++
Sbjct:  209 RAELLKRQGNGSSSSA--TDAHL------------QLQENHLDMISKSLSEIGMISHTLASAIGQQAQTIDSLDEKADNITEKSRLVTRRADRLIQNKS-WTPVKPTFACHVSIRHIDSGCYLSVHEGNLVLQNTFHETTGVFSLWKRQGEIFGLKNKESGRWLGQSML-GGISCSAYDFGRREEWEADSDWSTSR----LLCTSVGWGAGGYLLV---------NTYNFSIRLGGCGVEERKKADLWCITNLDT 434          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|673035754|ref|XP_008871838.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574472277|gb|ETV99282.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 96.6709 bits (239), Expect = 1.485e-18
Identity = 87/303 (28.71%), Postives = 145/303 (47.85%), Query Frame = 0
Query:   62 LRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGPGQQAGERTEAHSSDPPLWRDQPRDGCSNPVKDERQ-----ELFARKVNGETADARLKRA-HVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYT---SQALTGLQSVLSRKWLGQHWISGALGVRGT 355
            LR   E++ I RET  A++ Q EALDR+E  +D     ++++   +RGMTW G L N F++EP   RP  ST   D   G   P  +  +R++    +   +     DG S+  +D +Q     ELFA   +    ++  +R+ +V  +G      +   Q  +L++L   L E +   R +  AL     Q+DR++A SE  +D  R V  KA + + +     A+    ++  A +E +S  FL+V   +        S++C F A+T   +  + G Q   S +WLG +   G++ V  T
Sbjct:   27 LRTTAETLNIARETAVALSQQSEALDRAERNLDLTETTVKQANHVVRGMTWSGWLYNKFTKEPSLSRPLPST---DISMGFICPECRVAQRSQHGLLEH--YASMHGDGPSSSPQDSQQRQSIRELFASSSSQTHDNSTSQRSGNVDDEG------LNPDQRAFLDALAPQLLEMKHASRAIGNALDHHNAQLDRIDAKSEKTKDDLRLVTAKAVKLTSSSMTIDAQ----FR-CALQEQQSRRFLTVVNGDPTFSMDTASESCIFRAFTLTGNAEVWGFQHEQSMRWLGLNMF-GSVKVIST 312          
BLAST of EWM21002.1 vs. NCBI_GenBank
Match: gi|698797454|ref|XP_009831756.1| (hypothetical protein H257_07806 [Aphanomyces astaci] >gi|574113547|gb|ETV79037.1| hypothetical protein H257_07806 [Aphanomyces astaci])

HSP 1 Score: 94.3597 bits (233), Expect = 1.929e-17
Identity = 92/345 (26.67%), Postives = 152/345 (44.06%), Query Frame = 0
Query:   62 LRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRPRTSTWLADRRAGLRGPGQQAGERTEAHSSDPPLWRDQPRDGCSNPVK----DERQELFARKV------NGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGE-ELRLQEPNMSKACQFAAYTSQA---LTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFFLLCSANWGSGGYLMAFP 392
            LR   E++ I RET  A++ Q EALDR+E  +D     ++++   +RGM+W G L N F++EP    P +S+ ++    G   P  +  +R++       L   +  D    P K    D RQ    R +       G TA +  + +H    G      ++  Q  +L++L   L E +   R +  AL     Q+DRL+A S+  +D  R V  KA   + +      +    ++  A +E  S  F++     +        S  C F A+T      + G Q   SR+WLG +   G++ V+G  L   E++ +D  R     +    A +G GG+L   P
Sbjct:   27 LRTTAETLNIARETAVALSQQSEALDRAERNLDLTEATVKQANHVVRGMSWSGWLYNKFTKEPALHLPSSSSEIS---MGFICPECRVAQRSQ-------LALMEHYDTMHAPTKTSSQDTRQPSSRRDLVPSSHDRGTTASSSERHSHTDADG------LSVDQRAFLDALAPQLLEMKQASRAIGNALDHHNAQLDRLDAKSDKAKDDMRLVTAKAINLTHSSMTIDVQ----FR-CALQEQNSRRFMTPTSHGDPVFSLDTASDTCIFRAFTLTGNGDIWGFQHEQSRRWLGLNMF-GSVKVQGEALRSYEQFALDSGREWTTLYSFACA-FGHGGWLCVRP 348          
The following BLAST results are available for this feature:
BLAST of EWM21002.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101000|gb|EWM21002.1|0.000e+0100.00conserved c2h2 zinc finger protein [Nannochloropsi... [more]
gi|1210515010|dbj|GAX25973.1|1.051e-2627.59hypothetical protein FisN_4Hh543 [Fistulifera sola... [more]
gi|669148726|ref|XP_008609925.1|1.893e-2429.12hypothetical protein SDRG_05956 [Saprolegnia dicli... [more]
gi|219110469|ref|XP_002176986.1|5.223e-2430.80predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|676390215|ref|XP_009038386.1|2.863e-2332.07hypothetical protein AURANDRAFT_71858 [Aureococcus... [more]
gi|673035752|ref|XP_008871837.1|2.346e-2128.27hypothetical protein H310_08019 [Aphanomyces invad... [more]
gi|813199766|ref|XP_012209454.1|3.833e-2127.86hypothetical protein SPRG_14942 [Saprolegnia paras... [more]
gi|1210516919|dbj|GAX24408.1|9.543e-2030.59hypothetical protein FisN_4Lh543 [Fistulifera sola... [more]
gi|673035754|ref|XP_008871838.1|1.485e-1828.71hypothetical protein, variant [Aphanomyces invadan... [more]
gi|698797454|ref|XP_009831756.1|1.929e-1726.67hypothetical protein H257_07806 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9703rna9703Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications