EWM21004.1, cds9665 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|585101002|gb|EWM21004.1| (cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
Query: 1 MNRTVAYPSTSKLTYQICCAGLISLCKAFLRPCVQDVPTSRKTRMRVEGALFTCTLAFYFASTGAAAGSSSAALAFQTPGLPSRSPSALLGLVVPQSFTASTRPFSHLAYLADRKAWQGRTAVVTESNGGEVSWSRLARMAGGGNAASNRGNEPSLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGKAK 347
MNRTVAYPSTSKLTYQICCAGLISLCKAFLRPCVQDVPTSRKTRMRVEGALFTCTLAFYFASTGAAAGSSSAALAFQTPGLPSRSPSALLGLVVPQSFTASTRPFSHLAYLADRKAWQGRTAVVTESNGGEVSWSRLARMAGGGNAASNRGNEPSLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGKAK
Sbjct: 1 MNRTVAYPSTSKLTYQICCAGLISLCKAFLRPCVQDVPTSRKTRMRVEGALFTCTLAFYFASTGAAAGSSSAALAFQTPGLPSRSPSALLGLVVPQSFTASTRPFSHLAYLADRKAWQGRTAVVTESNGGEVSWSRLARMAGGGNAASNRGNEPSLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGKAK 347
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|298705481|emb|CBJ28756.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 212.231 bits (539), Expect = 2.195e-63 Identity = 107/192 (55.73%), Postives = 141/192 (73.44%), Query Frame = 0
Query: 155 SLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGKA 346
+LWN+PNILT+ RV++IPV I+Y S RN CS +F AA TDWLDGY+ARR + +P G+FLDPVADKL+V+TAL+L+++RL P +TV +AII+CRE+G+SALREWMA G R+TV VG GK+KTATQM+A+++LL ++P + + GLL S VLTV S GY++AAWPAL GKA
Sbjct: 89 TLWNVPNILTMARVMAIPVFATIFYASLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLG-PWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMMAITMLLLLEPGATVTLVNPATYMPIAKGLLYVSTVLTVTSGSGYLKAAWPALMGKA 279
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|1054552666|ref|WP_066322061.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Halomonas sp. G11] >gi|1036581209|gb|OAZ89925.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Halomonas sp. G11]) HSP 1 Score: 189.889 bits (481), Expect = 4.253e-56 Identity = 96/186 (51.61%), Postives = 130/186 (69.89%), Query Frame = 0
Query: 158 NLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALT 343
N+PNILTL R+ IP+L++++Y SW +G+F A++TDWLDGYLARR N S+P GAFLDPVADKLMVA AL L+ +R ++ ++T+ +II REI +SALREWMA G R VAV W GK KT QM+A+ VLL P AH L +VGV +L +A+LT++S + Y+++AWP L+
Sbjct: 2 NIPNILTLARIAFIPLLVVLFYLPFSWSMPIAAGMFALASVTDWLDGYLARRWNQSTPFGAFLDPVADKLMVAVALALLIERFDTALLTLPALVIIGREIVISALREWMAEMGKRGMVAVSWVGKLKTTLQMVAILVLLAFPP--------AHPLAQVGVLILYVAAMLTLWSMIQYLKSAWPHLS 179
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|1178480742|ref|WP_083002578.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Halomonas sp. GT]) HSP 1 Score: 189.504 bits (480), Expect = 5.944e-56 Identity = 96/186 (51.61%), Postives = 128/186 (68.82%), Query Frame = 0
Query: 158 NLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALT 343
N+PNILTL R++ IP+L++++Y SW +GLF A++TDWLDGYLARR N S+P GAFLDPVADKLMVA AL L+ +R ++ V+T+ +II REI +SALREWMA G R VAV W GK KT QM+AL +LL P H+ +GV +L +A+LT++S Y++AAWP L+
Sbjct: 2 NIPNILTLARIVFIPLLVVLFYLPFSWSMPVAAGLFALASITDWLDGYLARRWNQSTPFGAFLDPVADKLMVAVALALLIERFDTLVLTLPALVIIGREIVISALREWMAEMGKRGMVAVSWIGKLKTTLQMVALLILLAFPP--------GHEFALIGVVVLYAAAILTLWSMAQYLKAAWPHLS 179
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|497408521|ref|WP_009722719.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Halomonas sp. TD01] >gi|338765330|gb|EGP20274.1| CDP-diacylglycerol--glycerol-3-phosphate3-phospha tidyltransferase [Halomonas sp. TD01]) HSP 1 Score: 189.504 bits (480), Expect = 6.140e-56 Identity = 96/186 (51.61%), Postives = 129/186 (69.35%), Query Frame = 0
Query: 158 NLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALT 343
N+PNILTL R++ IP+L++++Y +W +GLF A++TDWLDGYLARR N S+P GAFLDPVADKLMVA AL L+ +R ++ V+T+ +II REI +SALREWMA G R VAV W GK KT QM+AL +LL P H+L +GV +L +A+LT++S Y++AAWP L+
Sbjct: 2 NIPNILTLARIVFIPLLVVLFYLPFNWSMPVAAGLFALASITDWLDGYLARRWNQSTPFGAFLDPVADKLMVAVALALLIERFDTLVLTLPALVIIGREIVISALREWMAEMGKRGMVAVSWIGKLKTTLQMVALLILLAFPP--------GHELAIIGVVVLYAAAILTLWSMAQYLKAAWPHLS 179
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|740697597|ref|WP_038482886.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Halomonas campaniensis] >gi|641742290|gb|AIA75568.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Halomonas campaniensis]) HSP 1 Score: 188.734 bits (478), Expect = 1.212e-55 Identity = 96/186 (51.61%), Postives = 128/186 (68.82%), Query Frame = 0
Query: 158 NLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALT 343
N+PNILTL R++ IP+L++++Y SW +GLF A++TDWLDGYLARR N S+P GAFLDPVADKLMVA AL L+ +R ++ V+T+ +II REI +SALREWMA G R VAV W GK KT QM+AL +LL P H+ +GV +L +A+LT++S Y++AAWP L+
Sbjct: 2 NIPNILTLARIVFIPLLVVLFYLPFSWSMPVAAGLFALASITDWLDGYLARRWNQSTPFGAFLDPVADKLMVAVALALLIERFDTLVLTLPALVIIGREIVISALREWMAEMGKRGMVAVSWIGKLKTTLQMVALLILLAFPP--------GHEFALMGVVVLYAAAILTLWSMAQYLKAAWPHLS 179
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|662116697|ref|WP_030070301.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Halomonas alkaliantarctica]) HSP 1 Score: 188.734 bits (478), Expect = 1.239e-55 Identity = 97/186 (52.15%), Postives = 128/186 (68.82%), Query Frame = 0
Query: 158 NLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALT 343
N+PNILTL R+ IP+L++++Y SW +GLF A++TDWLDGYLARR N S+P GAFLDPVADKLMVA AL L+ +R ++ V+T+ +II REI +SALREWMA G R VAV W GK KT QM+AL +LL P H+L +GV +L +A+LT++S Y++AAWP L+
Sbjct: 2 NIPNILTLARIAFIPLLVVLFYLPFSWSMPVAAGLFALASVTDWLDGYLARRWNQSTPFGAFLDPVADKLMVAVALALLIERFDTLVLTLPALVIIGREIVISALREWMAEMGKRGMVAVSWIGKLKTTLQMVALLILLAFPP--------GHELALIGVVVLYAAAILTLWSMAQYLKAAWPHLS 179
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|751597730|ref|WP_041065910.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Thiolapillus brandeum] >gi|574954965|dbj|BAO43808.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Thiolapillus brandeum]) HSP 1 Score: 188.734 bits (478), Expect = 1.613e-55 Identity = 99/192 (51.56%), Postives = 130/192 (67.71%), Query Frame = 0
Query: 156 LWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGKAK 347
+W++PN+LT R+I IPV + ++Y A W + + +F+ AA TDWLDG+LARRM L+SPLGAFLDPVADKLMV TALVL+ SP + +S A+II REI +SALREWMA GAR VAV W GKFKTA QM A+++L+Y HD +G LL + LT++S Y++AAWP+L+ K
Sbjct: 1 MWSIPNLLTFSRIIMIPVFVGMFYLPAPWNHQVAALVFMVAAFTDWLDGFLARRMGLTSPLGAFLDPVADKLMVTTALVLLVADNPSPWMALSAAVIIGREITISALREWMAELGARAKVAVSWVGKFKTAAQMGAITLLIY------RHDLFGLPTYRIGELLLYVAVALTLWSMTVYLRAAWPSLSEDRK 186
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|1089021516|emb|SDX65942.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Pseudomonas kuykendallii]) HSP 1 Score: 188.348 bits (477), Expect = 1.945e-55 Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = 0
Query: 158 NLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALT 343
N+PN+LT+LRV+ IPV I+ +Y SW A SG+F AA+TDW DGYLARR+ S+P GAFLDPVADKLMVA ALVL+ + + +T+ AIII REI VSALREWMA GAR VAV WGK+KTA QM AL +LL PP+ S+ L +G LL SAVLT++S + Y+ AAWP L+
Sbjct: 2 NIPNLLTVLRVLLIPVFILFFYLPFSWSYWASSGVFAIAAVTDWFDGYLARRLEQSTPFGAFLDPVADKLMVAVALVLLVEEHATLWLTLPAAIIIGREIVVSALREWMAELGARAHVAVSSWGKWKTAAQMAALIILL-ANPPVMSNWVL------LGFVLLIISAVLTLWSMLQYLIAAWPHLS 180
BLAST of EWM21004.1 vs. NCBI_GenBank
Match: gi|1093545957|ref|WP_070883161.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Pseudomonas punonensis] >gi|1086694037|emb|SDG07983.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Pseudomonas seleniipraecipitans]) HSP 1 Score: 188.348 bits (477), Expect = 2.548e-55 Identity = 107/190 (56.32%), Postives = 131/190 (68.95%), Query Frame = 0
Query: 158 NLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGKAK 347
N+PN+LT+LRV+ IP+ I+++Y SW A SG+F FAA+TDWLDGYLARR S+P GAFLDPVADKLMVATALVL+ + +T+ AIII REI VSALREWMA GAR VAV GK+KTA QM+AL +LL PPL L VG LL +AVLT++S Y+ AAWP L+ A+
Sbjct: 2 NIPNLLTVLRVLLIPIFILLFYMPFSWSYWAASGVFAFAAITDWLDGYLARRWEQSTPFGAFLDPVADKLMVATALVLLVAEHTNLWLTIPAAIIIGREIVVSALREWMAELGARAHVAVSNLGKWKTAAQMVALVILLG-NPPLFGFWVL------VGYALLIIAAVLTLWSMAQYLLAAWPHLSVSAE 184 The following BLAST results are available for this feature:
BLAST of EWM21004.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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