EWM20996.1, cds9662 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20996.1 vs. NCBI_GenBank
Match: gi|585100994|gb|EWM20996.1| (hypothetical protein Naga_100081g10 [Nannochloropsis gaditana]) HSP 1 Score: 232.261 bits (591), Expect = 2.873e-77 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
Query: 1 MMAASYPAAYTYGAVEEVHDRTALLKGTIRLTEETNQLAAGIGEDMRGQRVALEDGSTRIREMKGFAGEARRILNQMARRAAWHRATLWGIIVFLSLCIGLTLYRLFTNRGHII 114
MMAASYPAAYTYGAVEEVHDRTALLKGTIRLTEETNQLAAGIGEDMRGQRVALEDGSTRIREMKGFAGEARRILNQMARRAAWHRATLWGIIVFLSLCIGLTLYRLFTNRGHII
Sbjct: 1 MMAASYPAAYTYGAVEEVHDRTALLKGTIRLTEETNQLAAGIGEDMRGQRVALEDGSTRIREMKGFAGEARRILNQMARRAAWHRATLWGIIVFLSLCIGLTLYRLFTNRGHII 114
BLAST of EWM20996.1 vs. NCBI_GenBank
Match: gi|298707022|emb|CBJ29830.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 57.7658 bits (138), Expect = 1.353e-8 Identity = 31/91 (34.07%), Postives = 49/91 (53.85%), Query Frame = 0
Query: 24 LLKGTIRLTEETNQLAAGIGEDMRGQRVALEDGSTRIREMKGFAGEARRILNQMARRAAWHRATLWGIIVFLSLCIGLTLYRLFTNRGHII 114
LL ++ + ET+ +A + + GQR LE R+ +M+G EAR L +M ++A + L+ I LS+ I L +YR TN GH+
Sbjct: 17 LLDDSLAVQNETSNMADDVMARLFGQRETLESAQQRLGDMRGMTDEARLHLKEMEQKALRQKICLYLTIALLSILICLVIYREVTNGGHLF 107
BLAST of EWM20996.1 vs. NCBI_GenBank
Match: gi|673047525|ref|XP_008877723.1| (hypothetical protein H310_12449 [Aphanomyces invadans] >gi|574466654|gb|ETV93682.1| hypothetical protein H310_12449 [Aphanomyces invadans]) HSP 1 Score: 58.151 bits (139), Expect = 8.019e-8 Identity = 27/87 (31.03%), Postives = 49/87 (56.32%), Query Frame = 0
Query: 25 LKGTIRLTEETNQLAAGIGEDMRGQRVALEDGSTRIREMKGFAGEARRILNQMARRAAWHRATLWGIIVFLSLCIGLTLYRLFTNRG 111
L+ + R+ +ET Q+ + + + QR L ++++ + AG+ARR+L +M++R H+ TLW +I+ L + I L Y F R
Sbjct: 136 LEQSKRIVQETEQIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRMLTHKLTLWFVILVLIVAIVLVFYHDFIKRS 222 The following BLAST results are available for this feature:
BLAST of EWM20996.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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