EWM21016.1, cds9657 (CDS) Nannochloropsis gaditana

Overview
NameEWM21016.1
Unique Namecds9657
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:161117..162541 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21016.1
Productribosome biogenesis protein brx1
Orig transcript idgnl|cribi|Naga_100081g4.763.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:161117..162541 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR004154Anticodon-bd
IPR026532BRX1
IPR007109Brix
Homology
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|553182919|ref|XP_005853808.1| (ribosome biogenesis brx1-like protein [Nannochloropsis gaditana CCMP526] >gi|422295257|gb|EKU22556.1| ribosome biogenesis brx1-like protein [Nannochloropsis gaditana CCMP526] >gi|585101014|gb|EWM21016.1| ribosome biogenesis protein brx1 [Nannochloropsis gaditana])

HSP 1 Score: 971.459 bits (2510), Expect = 0.000e+0
Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0
Query:    1 MVRTTQKRKAAMTSAGTTSAKPAKKKQSTTISSKQEQAESRNRRNKDENEALTRVEDESEEQEDEQENLVRRSSTRMGGMHGLMLRGRADGSSSSDSGADEDENDENSVSDSADATARARNGGGSKKRLLSAASSAGRASNVSKPMTGKKDPDVQNDFSNTSSHPVVGAASSSTVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELFRVKV 474
            MVRTTQKRKAAMTSAGTTSAKPAKKKQSTTISSKQEQAESRNRRNKDENEALTRVEDESEEQEDEQENLVRRSSTRMGGMHGLMLRGRADGSSSSDSGADEDENDENSVSDSADATARARNGGGSKKRLLSAASSAGRASNVSKPMTGKKDPDVQNDFSNTSSHPVVGAASSSTVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELFRVKV
Sbjct:    1 MVRTTQKRKAAMTSAGTTSAKPAKKKQSTTISSKQEQAESRNRRNKDENEALTRVEDESEEQEDEQENLVRRSSTRMGGMHGLMLRGRADGSSSSDSGADEDENDENSVSDSADATARARNGGGSKKRLLSAASSAGRASNVSKPMTGKKDPDVQNDFSNTSSHPVVGAASSSTVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELFRVKV 474          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|553189095|ref|XP_005854930.1| (ribosome biogenesis brx1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294132|gb|EKU21432.1| ribosome biogenesis brx1-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
Query:   77 MGGMHGLMLRGRADGSSSSDSGADEDENDENSVSDSADATARARNGGGSKKRLLSAASSAGRASNVSKPMTGKKDPDVQNDFSNTSSHPVVGAASSSTVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSL 394
            MGGMHGLMLRGRADGSSSSDSGADEDENDENSVSDSADATARARNGGGSKKRLLSAASSAGRASNVSKPMTGKKDPDVQNDFSNTSSHPVVGAASSSTVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSL
Sbjct:    1 MGGMHGLMLRGRADGSSSSDSGADEDENDENSVSDSADATARARNGGGSKKRLLSAASSAGRASNVSKPMTGKKDPDVQNDFSNTSSHPVVGAASSSTVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSL 318          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|219122803|ref|XP_002181728.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407004|gb|EEC46942.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 347.436 bits (890), Expect = 1.373e-113
Identity = 161/305 (52.79%), Postives = 217/305 (71.15%), Query Frame = 0
Query:  173 STVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDC--KGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSK----TPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELFR 471
            +TV+ DG Y+N+QR L  CSRGVTARYRHLLEDLR L+PHHKK+ KLD    G  Q +++I E++SCN  ++LE RKRQD Y+WL +    +P GPS++F V N+HT+DELRLTGN M GSRP+++FDE+F    H ++++ L +D FGTPRGHPKSKPFVDRV+AF  AD ++WVRNYQ+++  P                + A+ A   KK  G+ EA     TS+VEIGPRFVLNPIR+F GSFGG TL+QNPDF SPN +R+ +++++G++   +  +   R ERK+Q VLP+D L+ +FR
Sbjct:   66 TTVRNDGRYRNKQRCLTLCSRGVTARYRHLLEDLRTLMPHHKKESKLDPGEDGVGQAVSDICEMRSCNTTMFLECRKRQDAYMWLGRVGGQSP-GPSVRFHVTNIHTMDELRLTGNCMKGSRPIMTFDESFGRVDHLKLLKELFIDTFGTPRGHPKSKPFVDRVMAFCYADNRIWVRNYQVIEEQP----------------SNAKEAHQIKKNSGREEA-----TSMVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRSLERKSKGSQYDQRKNSQKERHERKSQLVLPEDPLKSVFR 348          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|1173959628|gb|OQS05841.1| (hypothetical protein THRCLA_02071 [Thraustotheca clavata])

HSP 1 Score: 343.584 bits (880), Expect = 1.147e-112
Identity = 158/290 (54.48%), Postives = 206/290 (71.03%), Query Frame = 0
Query:  181 YKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELF 470
            Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L V+NEIAE+K CNN ++LEARKRQDLY+W+SKTP+GPS KF V NVHT+DEL++TGNA++GSRP+L+FD AFD   H ++++ + +  +GTP+GHPKSKPF+DRV++F  AD K+W RNYQ+ D              +A++K   +AA  R      GE    ELT+LVEIGPRFVL+PIR+F GSFGG TLYQNP + +PN VR   +  +  R   +  A   R  R    V+P+D+  ++F
Sbjct:   35 YINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTIFLEARKRQDLYMWISKTPIGPSAKFLVQNVHTMDELKMTGNALIGSRPLLTFDSAFDEHAHLKLIKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLAD--------------EADSKKLEQAAVHR------GE----ELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAQLDKRDRYVTRKLAQDSRASRNEVNVMPEDQFADVF 300          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|1173936029|gb|OQR87062.1| (hypothetical protein ACHHYP_09608 [Achlya hypogyna])

HSP 1 Score: 340.502 bits (872), Expect = 2.057e-111
Identity = 159/291 (54.64%), Postives = 205/291 (70.45%), Query Frame = 0
Query:  180 SYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELF 470
            SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L V+NEIAE+K CN+ ++LEARKRQDLY+W++ TP GPSIKF V NVHT+DEL++TGNA++GSRP+L+FD AFD   H ++++ + +  +GTP+GHPKSKPF+DRV++F  AD K+W RNYQ+ D              +A+ K   +AA  R      GE    ELT+LVEIGPRFVL+PIR+F GSFGG TLYQNP + +PN VR      +  R   +  A   R  R    V+P+DEL ++F
Sbjct:   35 SYVNKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNSTIFLEARKRQDLYMWVAGTPTGPSIKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDEVAHLKLIKNMFIQVWGTPKGHPKSKPFIDRVMSFYFADNKIWCRNYQLAD--------------EADTKKLEQAAVHR------GE----ELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRAETNVMPEDELADVF 301          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|673038200|ref|XP_008873061.1| (hypothetical protein H310_08914 [Aphanomyces invadans] >gi|574471178|gb|ETV98186.1| hypothetical protein H310_08914 [Aphanomyces invadans])

HSP 1 Score: 340.502 bits (872), Expect = 2.382e-111
Identity = 158/297 (53.20%), Postives = 209/297 (70.37%), Query Frame = 0
Query:  174 TVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELF 470
            T+K  G Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L V+NEIAE+K CNN ++LEARK+QDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRP+L+FD AFD   H ++++A+ +  +GTP+GHPKSKPF+DRV++F  ADGK+W RN+Q+ D              +A+ K   +AA  R      GE    ELT+L+EIGPRFV+ PIR+F GSFGG TLYQNP + +PN  R   K  +  +  A+  A+  R  R    V P+D+  ++F
Sbjct:   30 TLKPAGGYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTVFLEARKKQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDETAHMQLIKAMFIQVWGTPKGHPKSKPFIDRVMSFYFADGKIWCRNFQLAD--------------EADTKKLEQAALHR------GE----ELTNLIEIGPRFVMTPIRIFDGSFGGVTLYQNPHYVAPNETRKHAKFDKRDKYVARKLAEDSRASRNQINVHPEDQFADVF 302          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|1072230255|gb|OEU14988.1| (Brix-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 339.732 bits (870), Expect = 9.301e-111
Identity = 163/298 (54.70%), Postives = 203/298 (68.12%), Query Frame = 0
Query:  178 DGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDC--KGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKT--PLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELFR 471
            DG Y+N+QR LV C RG TARYRHLLEDLR ++PHHKK+ KLD    G    +N+IA+++ CN  L+LE RKRQD YLWL +    LGPS KF + N HT+DELRLTGN M GSRP+L+FD AFD   H R+++ +  D FGTPRGHPKSKPFVDRV+AF  AD K+WVRNYQI++                +A  A  A   +KK      +G+ E TSLVEIGPRFVLNPIR+F GSFGG TL+QNPDF SPN +RAE+K+ +G   + +  +   RK R  + VLP+D L  +FR
Sbjct:   54 DGKYRNKQRCLVLCLRGATARYRHLLEDLRTMLPHHKKESKLDAGKNGAASAVNDIAQMRGCNTVLFLECRKRQDAYLWLGRVGDNLGPSAKFHLTNCHTMDELRLTGNCMRGSRPILTFDAAFDTTSHLRLLKTIFTDVFGTPRGHPKSKPFVDRVMAFYYADNKIWVRNYQILE---------------QQATNALEAHTLKKK------SGQEESTSLVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRAEEKKRQGLSYTDRKDSQKRRKTRHEELVLPEDPLDSVFR 330          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|813174077|ref|XP_012204918.1| (hypothetical protein SPRG_10396 [Saprolegnia parasitica CBS 223.65] >gi|641530184|gb|KDO24321.1| hypothetical protein SPRG_10396 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 338.191 bits (866), Expect = 1.575e-110
Identity = 159/301 (52.82%), Postives = 205/301 (68.11%), Query Frame = 0
Query:  170 ASSSTVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELF 470
            A     K   SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L V+NEIAE+K CN  ++LEARKRQDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRP+L+FD AFD   H ++++ + +  +GTP+GHPKSKPF+DRV++F  AD K+W RNYQ+ D              +A+ K   +AA  R      GE    ELT+LVEIGPRFVL+PIR+F GSFGG TLYQNP + +PN VR      +  R   +  A   R  R    V+P+D+  ++F
Sbjct:   25 AQMDATKPKSSYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNTTIFLEARKRQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDEVAHLKLLKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLAD--------------EADTKKLEQAAVHR------GE----ELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRNELNVMPEDQFADVF 301          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|698818685|ref|XP_009842371.1| (hypothetical protein H257_15832 [Aphanomyces astaci] >gi|574102522|gb|ETV68072.1| hypothetical protein H257_15832 [Aphanomyces astaci])

HSP 1 Score: 338.191 bits (866), Expect = 1.755e-110
Identity = 155/290 (53.45%), Postives = 205/290 (70.69%), Query Frame = 0
Query:  181 YKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELF 470
            Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L V+NEIAE+K CNN ++LEARK+QDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRP+L+FD AFD   H ++++AL +  +GTP+GHPKSKPF+DRV++F  ADGK+W RN+Q+ D              +A+ K   +AA  R      GE    ELT+L+EIGPRFV+ PIR+F GSFGG TLYQNP++ +PN  R   K  +  +   +  A+  R  R    V P+D+  ++F
Sbjct:   36 YVNKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTVFLEARKKQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDETAHMQLIKALFIQVWGTPKGHPKSKPFIDRVMSFYFADGKIWCRNFQLAD--------------EADTKKLEQAALHR------GE----ELTNLIEIGPRFVMTPIRIFDGSFGGVTLYQNPNYVAPNETRKTAKYDKRDKYVTRKLAEDTRASRNQVNVHPEDQFADVF 301          
BLAST of EWM21016.1 vs. NCBI_GenBank
Match: gi|669142034|ref|XP_008606579.1| (hypothetical protein SDRG_02758 [Saprolegnia diclina VS20] >gi|530741863|gb|EQC40105.1| hypothetical protein SDRG_02758 [Saprolegnia diclina VS20])

HSP 1 Score: 337.806 bits (865), Expect = 2.043e-110
Identity = 159/301 (52.82%), Postives = 205/301 (68.11%), Query Frame = 0
Query:  170 ASSSTVKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAADPEAAAKAEAKAAARAAAGRKKEGGKGEAGEGELTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELF 470
            A     K   SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L V+NEIAE+K CN  ++LEARKRQDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRP+L+FD AFD   H ++++ + +  +GTP+GHPKSKPF+DRV++F  AD K+W RNYQ+ D              +A+ K   +AA  R      GE    ELT+LVEIGPRFVL+PIR+F GSFGG TLYQNP + +PN VR      +  R   +  A   R  R    V+P+D+  ++F
Sbjct:   25 AQMDVTKPKSSYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNTTIFLEARKRQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALIGSRPLLTFDAAFDDVAHLKLLKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLAD--------------EADTKKLEQAAVHR------GE----ELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRNELNVMPEDQFADVF 301          
The following BLAST results are available for this feature:
BLAST of EWM21016.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553182919|ref|XP_005853808.1|0.000e+0100.00ribosome biogenesis brx1-like protein [Nannochloro... [more]
gi|553189095|ref|XP_005854930.1|0.000e+0100.00ribosome biogenesis brx1-like protein, partial [Na... [more]
gi|219122803|ref|XP_002181728.1|1.373e-11352.79predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1173959628|gb|OQS05841.1|1.147e-11254.48hypothetical protein THRCLA_02071 [Thraustotheca c... [more]
gi|1173936029|gb|OQR87062.1|2.057e-11154.64hypothetical protein ACHHYP_09608 [Achlya hypogyna... [more]
gi|673038200|ref|XP_008873061.1|2.382e-11153.20hypothetical protein H310_08914 [Aphanomyces invad... [more]
gi|1072230255|gb|OEU14988.1|9.301e-11154.70Brix-domain-containing protein [Fragilariopsis cyl... [more]
gi|813174077|ref|XP_012204918.1|1.575e-11052.82hypothetical protein SPRG_10396 [Saprolegnia paras... [more]
gi|698818685|ref|XP_009842371.1|1.755e-11053.45hypothetical protein H257_15832 [Aphanomyces astac... [more]
gi|669142034|ref|XP_008606579.1|2.043e-11052.82hypothetical protein SDRG_02758 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9688rna9688Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications