EWM21023.1, cds9650 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21023.1 vs. NCBI_GenBank
Match: gi|585101026|gb|EWM21023.1| (expressed unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 520.005 bits (1338), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 1 MGDTRGFMFCLSIQRGLLAAFSLSGRMAIYEGEQPNAYMQSTGRSGSNPWQLFLYFIFPIPLVFLVLISLPFPARYRAKIRVGILNALNRISFLRFDYGGASISLIAIIILIALLGLIFSANDSLNARRAENQAHFFAEKKELRCKRWRAERNFWLSVLGCVLWVVLLRIQTLLMDVGPLEERLKRAEEERDAAAKESKEKEGVLRRLREAVEQGVREGKEKEGVILTLREKMGEVEGLKKRVVILEEEKEALRKGSKKTS 261 MGDTRGFMFCLSIQRGLLAAFSLSGRMAIYEGEQPNAYMQSTGRSGSNPWQLFLYFIFPIPLVFLVLISLPFPARYRAKIRVGILNALNRISFLRFDYGGASISLIAIIILIALLGLIFSANDSLNARRAENQAHFFAEKKELRCKRWRAERNFWLSVLGCVLWVVLLRIQTLLMDVGPLEERLKRAEEERDAAAKESKEKEGVLRRLREAVEQGVREGKEKEGVILTLREKMGEVEGLKKRVVILEEEKEALRKGSKKTS Sbjct: 1 MGDTRGFMFCLSIQRGLLAAFSLSGRMAIYEGEQPNAYMQSTGRSGSNPWQLFLYFIFPIPLVFLVLISLPFPARYRAKIRVGILNALNRISFLRFDYGGASISLIAIIILIALLGLIFSANDSLNARRAENQAHFFAEKKELRCKRWRAERNFWLSVLGCVLWVVLLRIQTLLMDVGPLEERLKRAEEERDAAAKESKEKEGVLRRLREAVEQGVREGKEKEGVILTLREKMGEVEGLKKRVVILEEEKEALRKGSKKTS 261
BLAST of EWM21023.1 vs. NCBI_GenBank
Match: gi|299470147|emb|CBN78175.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 65.4698 bits (158), Expect = 8.106e-10 Identity = 46/141 (32.62%), Postives = 71/141 (50.35%), Query Frame = 0 Query: 45 SGSNPWQLFLYFIFPIPLVFLVLISLPFPARYRAKIRVGILNALNRISFLRFDYGGASISLIAIIILIALLGLIFSANDSLNARRAENQAHFFAEKKELRCKRWRAERNFWLSVLGCVLWVVLLRIQTLLMDVGPLEERLK 185 + +N W L + IFPIP FL+LI LP + R I+ R+ F + SI LI +I+ + ++ R E A F EK LR +RWRAERNF++S + V+ R++ +L +V L E+++ Sbjct: 2 ASNNLWPLLIKIIFPIPASFLLLICLPLSTQSR------IMRWTRRLYDKIFSFQVMSIPLIYLIMAASCALFAAMCLETYGLRVREVNATHFDEKMNLRGRRWRAERNFYISFMFLSCSVLANRVRLMLKEVDSLNEQIR 136
BLAST of EWM21023.1 vs. NCBI_GenBank
Match: gi|698779309|ref|XP_009822698.1| (hypothetical protein H257_01274 [Aphanomyces astaci] >gi|574122359|gb|ETV87835.1| hypothetical protein H257_01274 [Aphanomyces astaci]) HSP 1 Score: 57.7658 bits (138), Expect = 4.723e-7 Identity = 36/125 (28.80%), Postives = 66/125 (52.80%), Query Frame = 0 Query: 50 WQLFLYFIFPIPLVFLVLISLPFPARYRAKIRVGILNALNRISFLRFDYGGASI-SLIAIIILIALLGLIFSANDSLNARRAENQAHFFAEKKELRCKRWRAERNFWLSVLGCVLWVVLLRIQTL 173 W + Y + P ++ LVL+++PFP I G++ +N FL F+ G + SL+ +AL G + N + + + H+ A+ + + RWR+ERN+W+S L ++ +LL Q++ Sbjct: 4 WAAWAYVLLPPAVILLVLLTIPFPK----AIAKGVVR-MNDF-FLNFEVAGVPVVSLVTFFAFVALAGQSYDLQKRYNYQISGMEKHYEADLQH-KATRWRSERNWWISALTFTIYWMLLAFQSM 121 The following BLAST results are available for this feature:
BLAST of EWM21023.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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