EWM21038.1, cds9634 (CDS) Nannochloropsis gaditana

Overview
NameEWM21038.1
Unique Namecds9634
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:92683..93943 +
Alignment locationKK037255.1:94408..94616 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21038.1
Productp-tefb-associated cyclin-dependent protein kinase lsk1
Orig transcript idgnl|cribi|Naga_100680g2.3112.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:92683..93943 +
KK037255.1supercontigKK037255.1:94408..94616 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|585101048|gb|EWM21038.1| (p-tefb-associated cyclin-dependent protein kinase lsk1 [Nannochloropsis gaditana])

HSP 1 Score: 993.416 bits (2567), Expect = 0.000e+0
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0
Query:    1 MNQIYVDEEGRLRLGGFEEATLYHAGGGGGTGGEGGSEGGRGKGKRKEVDLDVGRRNLEEVWEEGKRRRKNLTAPEVLLGGEANFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGMGIGAGEGSRARAALLQEAKDAWIQITAVVPALLPGMSPRPFQGWVEEGSEAAGEGGEARNGGGTRAPGWKKDPEALANLFTFSSGAPPDSTGRKEGKTKAVFTSSSSGTDSRGENGRSLPSSLMSSFPSSAPGARSSQPSSLPPEGDDVDMEISSEDEENYRSKAAHRADEERRDGGKTQAGGDRPSSSRIVVKEDGESEWSAVCCRILISERTQTAWRVSTVIFEKNLMTNFTGGGREIDEEDTNLGSKPNFPCISGRYSKEKNMKHST 489
            MNQIYVDEEGRLRLGGFEEATLYHAGGGGGTGGEGGSEGGRGKGKRKEVDLDVGRRNLEEVWEEGKRRRKNLTAPEVLLGGEANFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGMGIGAGEGSRARAALLQEAKDAWIQITAVVPALLPGMSPRPFQGWVEEGSEAAGEGGEARNGGGTRAPGWKKDPEALANLFTFSSGAPPDSTGRKEGKTKAVFTSSSSGTDSRGENGRSLPSSLMSSFPSSAPGARSSQPSSLPPEGDDVDMEISSEDEENYRSKAAHRADEERRDGGKTQAGGDRPSSSRIVVKEDGESEWSAVCCRILISERTQTAWRVSTVIFEKNLMTNFTGGGREIDEEDTNLGSKPNFPCISGRYSKEKNMKHST
Sbjct:    1 MNQIYVDEEGRLRLGGFEEATLYHAGGGGGTGGEGGSEGGRGKGKRKEVDLDVGRRNLEEVWEEGKRRRKNLTAPEVLLGGEANFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGMGIGAGEGSRARAALLQEAKDAWIQITAVVPALLPGMSPRPFQGWVEEGSEAAGEGGEARNGGGTRAPGWKKDPEALANLFTFSSGAPPDSTGRKEGKTKAVFTSSSSGTDSRGENGRSLPSSLMSSFPSSAPGARSSQPSSLPPEGDDVDMEISSEDEENYRSKAAHRADEERRDGGKTQAGGDRPSSSRIVVKEDGESEWSAVCCRILISERTQTAWRVSTVIFEKNLMTNFTGGGREIDEEDTNLGSKPNFPCISGRYSKEKNMKHST 489          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|299116101|emb|CBN74517.1| (Possible Cdc2-related protein kinase [Ectocarpus siliculosus])

HSP 1 Score: 70.0922 bits (170), Expect = 5.957e-9
Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 0
Query:   74 APEVLLGGEANF--ASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSY-DNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYF 204
            APEV++  +     A+D+W+VGC+ + L LG+  F  RT +Q +E++++  GS     W  G   P Y   +P    G +      + ++LA A G K +P+    A LL  LL L+   R SAR+ L  +PYF
Sbjct: 1535 APEVIVDQKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPVDKEGKSLHFKPRLDKVLA-AEGNKGVPLDPALADLLQGLLKLDSRHRLSARDAL-ASPYF 1666          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|301100332|ref|XP_002899256.1| (histone-lysine N-methyltransferase, putative [Phytophthora infestans T30-4] >gi|262104173|gb|EEY62225.1| histone-lysine N-methyltransferase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 66.2402 bits (160), Expect = 1.078e-7
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 0
Query:   72 LTAPEVLLG-GEANFASDVWSVGCVLSALLLGRLAF-EARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLP-ISDEAAALLPALLHLNPMERPSARECLEVAPYF 204
            +TAPEVLLG  +  + SDVWS GCV+ A+LL ++ F + +  +  ++ IYR  G+    W     LP Y   +P+    Y  R  K + E       + K P   ++A  +L A+L L+P +R +A+  LE+  YF
Sbjct: 1214 VTAPEVLLGETKYTWRSDVWSAGCVVLAILLEKIPFLQGQDVKVQLDLIYRLCGTPSMSWDGAHKLPLYNSFRPKHE--YKMRLRKTLLE------QRSKFPDFPEDAVEVLEAMLQLDPAKRSTAKRLLEMR-YF 1340          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|325180796|emb|CCA15206.1| (cyclindependent kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 65.0846 bits (157), Expect = 1.117e-7
Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = 0
Query:   74 APEVLLGGEANFAS-DVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGS-YDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQ 205
            APE+LLG  +  AS D+WS+GCV + L +G   F+ +T  + +  I+   G+     W   ++LP      P++     P++ K    LL     +KK+     A  L+ +LLHL+P +RP+   CL  + YFQ
Sbjct:  200 APELLLGATSYDASIDMWSIGCVFAELYIGHPLFQGKTELEQITRIFDLCGTPTQESWPDYKYLPLTNKFVPEK-----PKSRKLKEYLLREVSSRKKM-FPKGAIELIESLLHLDPEQRPTTEGCLR-SLYFQ 326          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|1027066488|ref|XP_016642432.1| (hypothetical protein SAPIO_CDS5884 [Scedosporium apiospermum] >gi|666866114|gb|KEZ42633.1| hypothetical protein SAPIO_CDS5884 [Scedosporium apiospermum])

HSP 1 Score: 64.6994 bits (156), Expect = 1.483e-7
Identity = 54/160 (33.75%), Postives = 72/160 (45.00%), Query Frame = 0
Query:   74 APEVLLGGEANFAS-DVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGS-YDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLP-ISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGMGIGAGEGSRAR 230
            APE+LLG +   A+ D+WSVGC+ + LL     F A T  + +  I+  VG   D+ W   + LP     K  R +     T   +R          + P ++    ALL  LL LNP  RP+A E LE  PYFQ   KP    L       A +  R R
Sbjct:  240 APELLLGAKTYTAAIDMWSVGCIFAELLEREALFRAYTEAEQISKIFEVVGVPTDDTWPGFRRLPNAKSLKLPRKTKKQSATEDRIR---------PRFPDLTSAGCALLRDLLSLNPDARPTAAEMLE-HPYFQEKPKPKAEVLFPTFPSKANQERRPR 389          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|1043299934|gb|OBZ84980.1| (CTD kinase subunit alpha [Choanephora cucurbitarum])

HSP 1 Score: 65.0846 bits (157), Expect = 1.680e-7
Identity = 52/145 (35.86%), Postives = 71/145 (48.97%), Query Frame = 0
Query:   75 PEVLLGGEAN-FASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVG--SYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLI 216
            PE+LLG  A   A D+WSVGC++     G+  F        +E IY+ +G  S DN W   + LP++ L KPQ   G  P      REL           +S  A  L  ALL ++P+ RP+A E LE    F+ FKK  P  ++
Sbjct:  462 PELLLGTTAYGPAVDIWSVGCIMLEFFTGKAVFNGTDEVSQLECIYKIMGTPSVDN-WPTLKELPWFELVKPQ---GVYP---SRFRELYGPL-------LSPGALELSEALLSMDPINRPTAAEALE----FEYFKKESPEPVM 588          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|758354547|dbj|GAN03334.1| (pkinase-domain-containing protein [Mucor ambiguus])

HSP 1 Score: 64.6994 bits (156), Expect = 1.927e-7
Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 0
Query:   75 PEVLLGGEAN-FASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYD-NVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLP 212
            PE+LLG  A   A D+WSVGC++     G+  F  +     ++ IY+ +G+   + W   + LP+Y + +P  A  Y  +  +  + LL           S  A  L  ALL ++P++RP+A + LE    F  FK  LP
Sbjct:  459 PELLLGATAYGPAVDIWSVGCIMLEFFTGKAVFNGQDEVSQIDSIYKIMGTPSVDTWPTLKELPWYEMVRP--AENYVSKFRESYQSLL-----------SPGALELSEALLSMDPLKRPTATQALE----FSYFKHELP 581          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|891550820|ref|XP_013017005.1| (CMGC/CDK/CRK7 protein kinase Lsk1 [Schizosaccharomyces octosporus yFS286] >gi|528064281|gb|EPX73843.1| CMGC/CDK/CRK7 protein kinase Lsk1 [Schizosaccharomyces octosporus yFS286])

HSP 1 Score: 64.3142 bits (155), Expect = 2.388e-7
Identity = 46/148 (31.08%), Postives = 69/148 (46.62%), Query Frame = 0
Query:   75 PEVLLGGEANF--ASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGS-YDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGM 219
            PE+LLG E  +  A D+WSVGC++  L +G+  F+ +     +E IY  +G+  +  W   + LP+Y L KP          H+     +   R K    ++  A  L   LL LNP  RPSAR+ L    +      P P  ++  M
Sbjct:  438 PELLLG-ETKYDGAVDIWSVGCIVMELFIGKPLFQGKDEIHQLEIIYDLMGTPNEETWPEVKSLPWYDLLKP---------PHEKPSRFVDSFREK----LTPAAIDLCQKLLSLNPTHRPSARDALMHEYFVSESPPPEPAVILKDM 571          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|1021057280|emb|SAM06672.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 64.3142 bits (155), Expect = 2.695e-7
Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 0
Query:   75 PEVLLGGEA-NFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGS-YDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIF--KKPLPGTLI 216
            PE+LLG  A + A DVW VGC++    +G+  F        ++ IY+ +G+     W   + LP+Y L +P+       + H++      V R   K  ++  A AL  ALL ++P+ RP+A E LE   YF+    K  LP  L+
Sbjct:  555 PELLLGATAYDTAVDVWGVGCIMLEFFVGKPIFNGTDEISQLDSIYKLMGTPTKETWPAVEELPWYTLVRPK-------QNHEN------VFRETYKSLLTPGALALSEALLSMDPLNRPTAAEALEFD-YFKTEEPKDRLPANLL 686          
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|970662677|gb|KUG00043.1| (DNA-directed RNA polymerases I and III subunit [Phytophthora nicotianae])

HSP 1 Score: 64.6994 bits (156), Expect = 2.783e-7
Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 0
Query:   72 LTAPEVLLG-GEANFASDVWSVGCVLSALLLGRLAF-EARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLP-ISDEAAALLPALLHLNPMERPSARECLEVAPYF 204
            +TAPEVLLG  +  + SDVWS GCV+ A+LL ++ F + +  +  ++ IYR  G+    W+    LP Y        + + P+    +R    +   + K P   ++A  +L A+L L+P  R + ++ L++  YF
Sbjct:  777 VTAPEVLLGETKYTWRSDVWSAGCVVLAILLEKIPFLQGQDVKVQLDLIYRLCGTPSMSWEGAHKLPLY--------NAFRPKHEYKMRLRKTLLEQRSKFPDFPEDAVEVLEAMLQLDPARRSTVKKLLDMR-YF 903          
The following BLAST results are available for this feature:
BLAST of EWM21038.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101048|gb|EWM21038.1|0.000e+0100.00p-tefb-associated cyclin-dependent protein kinase ... [more]
gi|299116101|emb|CBN74517.1|5.957e-934.33Possible Cdc2-related protein kinase [Ectocarpus s... [more]
gi|301100332|ref|XP_002899256.1|1.078e-734.56histone-lysine N-methyltransferase, putative [Phyt... [more]
gi|325180796|emb|CCA15206.1|1.117e-732.84cyclindependent kinase putative [Albugo laibachii ... [more]
gi|1027066488|ref|XP_016642432.1|1.483e-733.75hypothetical protein SAPIO_CDS5884 [Scedosporium a... [more]
gi|1043299934|gb|OBZ84980.1|1.680e-735.86CTD kinase subunit alpha [Choanephora cucurbitarum... [more]
gi|758354547|dbj|GAN03334.1|1.927e-731.43pkinase-domain-containing protein [Mucor ambiguus][more]
gi|891550820|ref|XP_013017005.1|2.388e-731.08CMGC/CDK/CRK7 protein kinase Lsk1 [Schizosaccharom... [more]
gi|1021057280|emb|SAM06672.1|2.695e-732.19hypothetical protein [Absidia glauca][more]
gi|970662677|gb|KUG00043.1|2.783e-730.88DNA-directed RNA polymerases I and III subunit [Ph... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9665rna9665Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications