EWM21038.1, cds9634 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|585101048|gb|EWM21038.1| (p-tefb-associated cyclin-dependent protein kinase lsk1 [Nannochloropsis gaditana]) HSP 1 Score: 993.416 bits (2567), Expect = 0.000e+0 Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0
Query: 1 MNQIYVDEEGRLRLGGFEEATLYHAGGGGGTGGEGGSEGGRGKGKRKEVDLDVGRRNLEEVWEEGKRRRKNLTAPEVLLGGEANFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGMGIGAGEGSRARAALLQEAKDAWIQITAVVPALLPGMSPRPFQGWVEEGSEAAGEGGEARNGGGTRAPGWKKDPEALANLFTFSSGAPPDSTGRKEGKTKAVFTSSSSGTDSRGENGRSLPSSLMSSFPSSAPGARSSQPSSLPPEGDDVDMEISSEDEENYRSKAAHRADEERRDGGKTQAGGDRPSSSRIVVKEDGESEWSAVCCRILISERTQTAWRVSTVIFEKNLMTNFTGGGREIDEEDTNLGSKPNFPCISGRYSKEKNMKHST 489
MNQIYVDEEGRLRLGGFEEATLYHAGGGGGTGGEGGSEGGRGKGKRKEVDLDVGRRNLEEVWEEGKRRRKNLTAPEVLLGGEANFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGMGIGAGEGSRARAALLQEAKDAWIQITAVVPALLPGMSPRPFQGWVEEGSEAAGEGGEARNGGGTRAPGWKKDPEALANLFTFSSGAPPDSTGRKEGKTKAVFTSSSSGTDSRGENGRSLPSSLMSSFPSSAPGARSSQPSSLPPEGDDVDMEISSEDEENYRSKAAHRADEERRDGGKTQAGGDRPSSSRIVVKEDGESEWSAVCCRILISERTQTAWRVSTVIFEKNLMTNFTGGGREIDEEDTNLGSKPNFPCISGRYSKEKNMKHST
Sbjct: 1 MNQIYVDEEGRLRLGGFEEATLYHAGGGGGTGGEGGSEGGRGKGKRKEVDLDVGRRNLEEVWEEGKRRRKNLTAPEVLLGGEANFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGMGIGAGEGSRARAALLQEAKDAWIQITAVVPALLPGMSPRPFQGWVEEGSEAAGEGGEARNGGGTRAPGWKKDPEALANLFTFSSGAPPDSTGRKEGKTKAVFTSSSSGTDSRGENGRSLPSSLMSSFPSSAPGARSSQPSSLPPEGDDVDMEISSEDEENYRSKAAHRADEERRDGGKTQAGGDRPSSSRIVVKEDGESEWSAVCCRILISERTQTAWRVSTVIFEKNLMTNFTGGGREIDEEDTNLGSKPNFPCISGRYSKEKNMKHST 489
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|299116101|emb|CBN74517.1| (Possible Cdc2-related protein kinase [Ectocarpus siliculosus]) HSP 1 Score: 70.0922 bits (170), Expect = 5.957e-9 Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 0
Query: 74 APEVLLGGEANF--ASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSY-DNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYF 204
APEV++ + A+D+W+VGC+ + L LG+ F RT +Q +E++++ GS W G P Y +P G + + ++LA A G K +P+ A LL LL L+ R SAR+ L +PYF
Sbjct: 1535 APEVIVDQKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPVDKEGKSLHFKPRLDKVLA-AEGNKGVPLDPALADLLQGLLKLDSRHRLSARDAL-ASPYF 1666
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|301100332|ref|XP_002899256.1| (histone-lysine N-methyltransferase, putative [Phytophthora infestans T30-4] >gi|262104173|gb|EEY62225.1| histone-lysine N-methyltransferase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 66.2402 bits (160), Expect = 1.078e-7 Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 0
Query: 72 LTAPEVLLG-GEANFASDVWSVGCVLSALLLGRLAF-EARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLP-ISDEAAALLPALLHLNPMERPSARECLEVAPYF 204
+TAPEVLLG + + SDVWS GCV+ A+LL ++ F + + + ++ IYR G+ W LP Y +P+ Y R K + E + K P ++A +L A+L L+P +R +A+ LE+ YF
Sbjct: 1214 VTAPEVLLGETKYTWRSDVWSAGCVVLAILLEKIPFLQGQDVKVQLDLIYRLCGTPSMSWDGAHKLPLYNSFRPKHE--YKMRLRKTLLE------QRSKFPDFPEDAVEVLEAMLQLDPAKRSTAKRLLEMR-YF 1340
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|325180796|emb|CCA15206.1| (cyclindependent kinase putative [Albugo laibachii Nc14]) HSP 1 Score: 65.0846 bits (157), Expect = 1.117e-7 Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = 0
Query: 74 APEVLLGGEANFAS-DVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGS-YDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQ 205
APE+LLG + AS D+WS+GCV + L +G F+ +T + + I+ G+ W ++LP P++ P++ K LL +KK+ A L+ +LLHL+P +RP+ CL + YFQ
Sbjct: 200 APELLLGATSYDASIDMWSIGCVFAELYIGHPLFQGKTELEQITRIFDLCGTPTQESWPDYKYLPLTNKFVPEK-----PKSRKLKEYLLREVSSRKKM-FPKGAIELIESLLHLDPEQRPTTEGCLR-SLYFQ 326
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|1027066488|ref|XP_016642432.1| (hypothetical protein SAPIO_CDS5884 [Scedosporium apiospermum] >gi|666866114|gb|KEZ42633.1| hypothetical protein SAPIO_CDS5884 [Scedosporium apiospermum]) HSP 1 Score: 64.6994 bits (156), Expect = 1.483e-7 Identity = 54/160 (33.75%), Postives = 72/160 (45.00%), Query Frame = 0
Query: 74 APEVLLGGEANFAS-DVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGS-YDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLP-ISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGMGIGAGEGSRAR 230
APE+LLG + A+ D+WSVGC+ + LL F A T + + I+ VG D+ W + LP K R + T +R + P ++ ALL LL LNP RP+A E LE PYFQ KP L A + R R
Sbjct: 240 APELLLGAKTYTAAIDMWSVGCIFAELLEREALFRAYTEAEQISKIFEVVGVPTDDTWPGFRRLPNAKSLKLPRKTKKQSATEDRIR---------PRFPDLTSAGCALLRDLLSLNPDARPTAAEMLE-HPYFQEKPKPKAEVLFPTFPSKANQERRPR 389
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|1043299934|gb|OBZ84980.1| (CTD kinase subunit alpha [Choanephora cucurbitarum]) HSP 1 Score: 65.0846 bits (157), Expect = 1.680e-7 Identity = 52/145 (35.86%), Postives = 71/145 (48.97%), Query Frame = 0
Query: 75 PEVLLGGEAN-FASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVG--SYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLI 216
PE+LLG A A D+WSVGC++ G+ F +E IY+ +G S DN W + LP++ L KPQ G P REL +S A L ALL ++P+ RP+A E LE F+ FKK P ++
Sbjct: 462 PELLLGTTAYGPAVDIWSVGCIMLEFFTGKAVFNGTDEVSQLECIYKIMGTPSVDN-WPTLKELPWFELVKPQ---GVYP---SRFRELYGPL-------LSPGALELSEALLSMDPINRPTAAEALE----FEYFKKESPEPVM 588
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|758354547|dbj|GAN03334.1| (pkinase-domain-containing protein [Mucor ambiguus]) HSP 1 Score: 64.6994 bits (156), Expect = 1.927e-7 Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 0
Query: 75 PEVLLGGEAN-FASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYD-NVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLP 212
PE+LLG A A D+WSVGC++ G+ F + ++ IY+ +G+ + W + LP+Y + +P A Y + + + LL S A L ALL ++P++RP+A + LE F FK LP
Sbjct: 459 PELLLGATAYGPAVDIWSVGCIMLEFFTGKAVFNGQDEVSQIDSIYKIMGTPSVDTWPTLKELPWYEMVRP--AENYVSKFRESYQSLL-----------SPGALELSEALLSMDPLKRPTATQALE----FSYFKHELP 581
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|891550820|ref|XP_013017005.1| (CMGC/CDK/CRK7 protein kinase Lsk1 [Schizosaccharomyces octosporus yFS286] >gi|528064281|gb|EPX73843.1| CMGC/CDK/CRK7 protein kinase Lsk1 [Schizosaccharomyces octosporus yFS286]) HSP 1 Score: 64.3142 bits (155), Expect = 2.388e-7 Identity = 46/148 (31.08%), Postives = 69/148 (46.62%), Query Frame = 0
Query: 75 PEVLLGGEANF--ASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGS-YDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKKPLPGTLISGM 219
PE+LLG E + A D+WSVGC++ L +G+ F+ + +E IY +G+ + W + LP+Y L KP H+ + R K ++ A L LL LNP RPSAR+ L + P P ++ M
Sbjct: 438 PELLLG-ETKYDGAVDIWSVGCIVMELFIGKPLFQGKDEIHQLEIIYDLMGTPNEETWPEVKSLPWYDLLKP---------PHEKPSRFVDSFREK----LTPAAIDLCQKLLSLNPTHRPSARDALMHEYFVSESPPPEPAVILKDM 571
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|1021057280|emb|SAM06672.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 64.3142 bits (155), Expect = 2.695e-7 Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 0
Query: 75 PEVLLGGEA-NFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGS-YDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIF--KKPLPGTLI 216
PE+LLG A + A DVW VGC++ +G+ F ++ IY+ +G+ W + LP+Y L +P+ + H++ V R K ++ A AL ALL ++P+ RP+A E LE YF+ K LP L+
Sbjct: 555 PELLLGATAYDTAVDVWGVGCIMLEFFVGKPIFNGTDEISQLDSIYKLMGTPTKETWPAVEELPWYTLVRPK-------QNHEN------VFRETYKSLLTPGALALSEALLSMDPLNRPTAAEALEFD-YFKTEEPKDRLPANLL 686
BLAST of EWM21038.1 vs. NCBI_GenBank
Match: gi|970662677|gb|KUG00043.1| (DNA-directed RNA polymerases I and III subunit [Phytophthora nicotianae]) HSP 1 Score: 64.6994 bits (156), Expect = 2.783e-7 Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 0
Query: 72 LTAPEVLLG-GEANFASDVWSVGCVLSALLLGRLAF-EARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLP-ISDEAAALLPALLHLNPMERPSARECLEVAPYF 204
+TAPEVLLG + + SDVWS GCV+ A+LL ++ F + + + ++ IYR G+ W+ LP Y + + P+ +R + + K P ++A +L A+L L+P R + ++ L++ YF
Sbjct: 777 VTAPEVLLGETKYTWRSDVWSAGCVVLAILLEKIPFLQGQDVKVQLDLIYRLCGTPSMSWEGAHKLPLY--------NAFRPKHEYKMRLRKTLLEQRSKFPDFPEDAVEVLEAMLQLDPARRSTVKKLLDMR-YF 903 The following BLAST results are available for this feature:
BLAST of EWM21038.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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