EWM29706.1, cds963 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|585112284|gb|EWM29706.1| (hypothetical protein Naga_100124g11 [Nannochloropsis gaditana]) HSP 1 Score: 619.772 bits (1597), Expect = 0.000e+0 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
Query: 1 MCTSTAVPLRVPRVFFILPTSYRAHPASPILHKCGPSTDYQMAPCISLSSYSHLSPARRSSGPTLSGRWAKAGCLHGSKTSREAQRTRPGDTKARPKPWFPFFALMGIESSILGPFLDDFHGRTGVLHYNDPLSVDIGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLARAQWQALQDSTSGHEA 304
MCTSTAVPLRVPRVFFILPTSYRAHPASPILHKCGPSTDYQMAPCISLSSYSHLSPARRSSGPTLSGRWAKAGCLHGSKTSREAQRTRPGDTKARPKPWFPFFALMGIESSILGPFLDDFHGRTGVLHYNDPLSVDIGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLARAQWQALQDSTSGHEA
Sbjct: 1 MCTSTAVPLRVPRVFFILPTSYRAHPASPILHKCGPSTDYQMAPCISLSSYSHLSPARRSSGPTLSGRWAKAGCLHGSKTSREAQRTRPGDTKARPKPWFPFFALMGIESSILGPFLDDFHGRTGVLHYNDPLSVDIGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLARAQWQALQDSTSGHEA 304
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|299471742|emb|CBN76963.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 155.221 bits (391), Expect = 9.152e-42 Identity = 84/190 (44.21%), Postives = 118/190 (62.11%), Query Frame = 0
Query: 106 MGIESSILGPFLDDFHGRTGVLHYNDPLSVDIGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLARAQWQAL 295
M ++LGP LD++H GVL Y P+ +++ + +L T WVP LF +AG + L +++D A +TP + +P DVL ISLFSFQYY+SG+L V N V++ SL +A + FD T AGL V + T+ GP++E+ L T+LY+Y+ DF+ V SWIP VY CGGPAV NLAR + L
Sbjct: 94 MAAAGALLGPNLDNYHSAFGVLAYKHPIELNVAGHLILTTDWWVPPLFAVAGAGIGALYILLDAALETPQAQREPLWRDVLLSISLFSFQYYLSGLLTAVGCPNWVLVG-SLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYMYNGADFFGVDSWIPIVYFCGGPAVGNLARTIYAKL 282
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|551662850|ref|XP_005834190.1| (hypothetical protein GUITHDRAFT_69977 [Guillardia theta CCMP2712] >gi|428178334|gb|EKX47210.1| hypothetical protein GUITHDRAFT_69977 [Guillardia theta CCMP2712]) HSP 1 Score: 128.257 bits (321), Expect = 3.179e-32 Identity = 77/207 (37.20%), Postives = 107/207 (51.69%), Query Frame = 0
Query: 99 WFPFFALMGIESSILGPFLDDFHGRTGVLHYNDPLSVDIGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLT------TYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLARAQWQALQDST 299
W M ++LGP LD +H GVL Y +P + + + + T WVP +F LA VI+ ++D F+ + P PP L +S F FQYY SG+L V V L++SL AV C+ FDRT G + ++T + GP++E+ L T LY YS+PD +P WI WVY CG PAV L+R W + T
Sbjct: 14 WRDHLLAMATYGAMLGPQLDGYHSAFGVLKYTNPKQISLAGHFLFETDYWVPAMFALASVILGISYPILDMIFKEEELSV-PTPPKSLACVSFFCFQYYCSGLLFQQG-VEDVSLHLSLAISAVACWWIFDRTRTGAIMSIVTGLCGPLVEVFLLQVWPAWTGQTLYAYSAPDMLGIPLWIAWVYGCGAPAVGGLSRLTWNYVSTRT 218
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|971519736|dbj|GAQ78429.1| (hypothetical protein KFL_000130110 [Klebsormidium nitens]) HSP 1 Score: 122.865 bits (307), Expect = 2.760e-29 Identity = 78/211 (36.97%), Postives = 106/211 (50.24%), Query Frame = 0
Query: 111 SILGPFLDDFHGRTGVLHYNDPLSVDIGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMD------EAF-----------------------QTPCKKLQPAPPDVLKGISLFSFQYYISGVLA---GVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLAR 289
+ILGP LD H VLHY +P + +G + L T WVPLLFG A VI+ ++D EA + P P+ VL I+LF+ QY +SGVLA ++ +N++L G A+ + FDRT +GL LT+ GP++E+ L LY Y+ PD + +P WIPWVY CG PAV NL R
Sbjct: 93 AILGPLLDGRHSTHNVLHYENPTVIRLGSFFQLETCWWVPLLFGGAAVILGIGHPLLDSIDRKSEALSQLEATSQLAGLEGGAPIRSFLRKEPTGGYAPSWSFVLISIALFAMQYDLSGVLAEKASSGELSWTAVNLALAGTAIAHWATFDRTRSGLFWAALTATVGPLVEIGLIEGLHLYHYTHPDVFGIPLWIPWVYWCGAPAVGNLGR 303
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|1210529355|dbj|GAX11989.1| (hypothetical protein FisN_8Lh083 [Fistulifera solaris]) HSP 1 Score: 122.865 bits (307), Expect = 1.130e-28 Identity = 75/204 (36.76%), Postives = 113/204 (55.39%), Query Frame = 0
Query: 106 MGIESSILGPFLDDFHGRTGVLHYNDPLSVDI----GQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYI-----YSSPDFYSV---PSWIPWVYLCGGPAVCNLARAQWQALQD 297
M + + LGPFLD +H GVLHY P++ + ++ L TA WVP LFGLAG ++ +L + +D ++P+ P +L GISLF+FQY+ SGVL + + ILN+ + +A + ++ D T AGL T++ GP++E+ L + ++ + Y+ D P WI VY GGPA NLAR W A+ D
Sbjct: 98 MTLAGATLGPFLDTYHSAFGVLHYEHPITAALWSSAEEHPALITAWWVPELFGLAGFLIGWLYIALDAGLSP--SSIRPSVPKILGGISLFTFQYWFSGVLVAMGVDRVTILNI-MSTMAAMGFVALDGTLAGLVTSTATALGGPLIEICLLSLSQAGMLGENGYAYTDLGETGFFPLWICPVYFLGGPANGNLARGLWNAISD 298
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|1210527108|dbj|GAX14081.1| (hypothetical protein FisN_8Hh083 [Fistulifera solaris]) HSP 1 Score: 117.857 bits (294), Expect = 8.115e-27 Identity = 73/202 (36.14%), Postives = 110/202 (54.46%), Query Frame = 0
Query: 106 MGIESSILGPFLDDFHGRTGVLHYNDPLSVDIGQYH--VLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYI-----YSSPDFYSV---PSWIPWVYLCGGPAVCNLARAQWQALQD 297
M + + LGPFLD +H GVLHY P++ + L TA WVP LFG+AG ++ +L + +D + K+ P+ P +L GIS F+FQY+ SGVL + + ILN+ + +A + ++ D + AGL T++ GP++E+ L + T + Y+ D P WI VY GGPA NLAR W A+ +
Sbjct: 93 MTLAGATLGPFLDTYHSTFGVLHYEHPITAALWSSADPALITAWWVPELFGVAGFLIGWLYIGLDAGLSSSSKR--PSVPKILVGISFFTFQYWFSGVLVAMGVDRVTILNI-MSAMAAIGFVALDGSLAGLVTSTATAVGGPLIEIGLLSLTRAGMLGENGYAYTDLGETGFFPLWICPVYFLGGPANGNLARGLWNAISE 291
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|1072228894|gb|OEU13629.1| (hypothetical protein FRACYDRAFT_226830 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 115.931 bits (289), Expect = 1.164e-26 Identity = 80/216 (37.04%), Postives = 116/216 (53.70%), Query Frame = 0
Query: 106 MGIESSILGPFLDDFHGRTGVLHYNDPLSVDI---GQYHVLGTAAWVPLLFGLAGVIMSFLTVVMD------------EAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPV-ILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYS-------VPSWIPWVYLCGGPAVCNLARAQWQALQDS 298
M I + LGPFLD +H GVL YN+P+ + Y L TA WVP LFGLAG ++ +L +++D + + ++L P+PP + GIS F+FQY++SG+L L++ ILN+ + A + +L D + +GL V + T + GP++E L T T I + Y+ P WI VY GGPA NLAR W AL D+
Sbjct: 1 MSICGAGLGPFLDSYHSAFGVLKYNEPIQFVLWGSEAYPGLTTAWWVPELFGLAGFLIGWLYILLDAVLLKESSSDEGDVVEQEQQRL-PSPPKIFAGISFFTFQYWLSGILVQNSLLDRTGILNLMSV-FAAIGFLVLDGSMSGLIVSLATCLGGPLIEAGLITATNNGILNGGYHYTDLGETGFFPLWIIPVYFLGGPANGNLARGFWNALSDN 214
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|552823403|ref|XP_005846347.1| (hypothetical protein CHLNCDRAFT_135775 [Chlorella variabilis] >gi|307105998|gb|EFN54245.1| hypothetical protein CHLNCDRAFT_135775 [Chlorella variabilis]) HSP 1 Score: 111.309 bits (277), Expect = 5.707e-26 Identity = 73/192 (38.02%), Postives = 95/192 (49.48%), Query Frame = 0
Query: 108 IESSILGPFLDDFHGRTGVLHYNDPLSVDIGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMD-----EAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPV-----ILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLAR 289
+ S+ILGP D H + VLHY P + +G L T WVPLLF AG+I+ ++D Q P P+ VL I+LF QY SG L L + L+ LL V + FD + GL + LT++ GP +E+ L Y Y+ P F +PSWI WVYL GGPAV NL R
Sbjct: 1 MASAILGPLCDGQHSQHDVLHYAHPSLLSLGPLR-LETCWWVPLLFAAAGIILGVSHPLLDAWQQERGGQQPRGGADPSWSFVLAAITLFVLQYAASGTLEEPLLRQALPGGLPALDALLLSSGVALWWAFDCSPQGLLMACLTAVAGPAVEVALINGLHAYTYTHPSFLGIPSWIAWVYLAGGPAVGNLGR 191
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|145341901|ref|XP_001416041.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144576264|gb|ABO94333.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 112.079 bits (279), Expect = 6.120e-24 Identity = 83/261 (31.80%), Postives = 111/261 (42.53%), Query Frame = 0
Query: 104 ALMGIESSILGPFLDDFHGRTGVLHYNDPLSVD---------------------------------IGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDE-----------------------------------AFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAG-------VFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLAR 289
ALM + +ILGP LD H R VLHY PL + + + VL T WVP LFG A +++ +DE A P QP+ V IS+F+FQY +SG+LA FL +I ++ L AV + FD + GL + LT++ GP+ E++L Y LY YS PD +P+WIPWVY CGGPAV NL+R
Sbjct: 76 ALMFVAGAILGPLLDHQHSRFDVLHYATPLQIHFDALFAPLWNSPFGPIMNFIAPEPVKDLFRIMFVNENGVLETGWWVPPLFGAAAIVIGLGHTSLDEFRIRSSVKRAREIEIRKGLQGTEQIVSRTSELIENAKGKPALGWQPSWVSVNLCISVFAFQYLVSGILASPQSPFVDGFLPYHLI-DIFLCVWAVTTWYFFDNSAQGLFMASLTAVCGPVAEIVLINYGHLYSYSHPDILGIPTWIPWVYFCGGPAVGNLSR 335
BLAST of EWM29706.1 vs. NCBI_GenBank
Match: gi|397569292|gb|EJK46650.1| (hypothetical protein THAOC_34668, partial [Thalassiosira oceanica]) HSP 1 Score: 110.538 bits (275), Expect = 8.293e-24 Identity = 76/208 (36.54%), Postives = 106/208 (50.96%), Query Frame = 0
Query: 96 PKPWFPFFALMGIESSILGPFLDDFHGRTGVLHYNDPLSVDI----GQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTY----TELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLARAQWQAL 295
P+ F M ++LGPFLD +H GVL Y+ PL+ I G T WVP LFGLAG ++ +L + +DE F + APP VL GI+ F+ QY++SGVL + IL++ + LA + D TW+G T++ GP++E+ L + + S + P WI VY GGPA NLARA W L
Sbjct: 176 PQRSISFSIFMAFCGAMLGPFLDSYHSLFGVLAYDTPLTFPILGSGGDILQCVTTYWVPPLFGLAGFLIGWLYIWLDEVFDV---EDVVAPPKVLLGIAFFTLQYWLSGVLYANGVDRSSILSI-MSALAAFGFYALDGTWSGFLTSTATALGGPLIEVGLISSLPPDIGYHYTDSGELGFFPLWILPVYFLGGPANGNLARAFWDRL 379 The following BLAST results are available for this feature:
BLAST of EWM29706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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