EWM21053.1, cds9624 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|585101070|gb|EWM21053.1| (suppressor of variegation 3-9 [Nannochloropsis gaditana]) HSP 1 Score: 1018.07 bits (2631), Expect = 0.000e+0 Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 0
Query: 1 MHTPLPCVPPPPSSGLPPLPLLPSTFRWVDSVVLPSGTHNRRLHRRGGRAGSAGKGQTQGAEAAEGCGCDGESRNSAALSSPSSFPLVCCHDASCPCYRTAHRIALGDAPLPGEHSGSNAGKASIESIPSPSTRPKSDQDQSKGDSTTATDTHTIDDEKGSNNIDATPDNNDVVRHRMPSNSSNPVAGQDADRPLSPTSSPSSSTSSSFKFEFECSSSCRCLPDQCQLRPTQASARLPLSLGYLPKKGWGVFFSPPPSCPPARPPSLPPHTFVAEYTGELISTVEARRRLAIYDEVSALSSLPSSLPSSLPPSPGIGKRPSPPAGCTHAAEHVKHAQGHAQANAAPAEVPILGPCPSQEGDKEERRGGQVHAGPRPHYLLTLLEEGDDFYLRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQPGL 504
MHTPLPCVPPPPSSGLPPLPLLPSTFRWVDSVVLPSGTHNRRLHRRGGRAGSAGKGQTQGAEAAEGCGCDGESRNSAALSSPSSFPLVCCHDASCPCYRTAHRIALGDAPLPGEHSGSNAGKASIESIPSPSTRPKSDQDQSKGDSTTATDTHTIDDEKGSNNIDATPDNNDVVRHRMPSNSSNPVAGQDADRPLSPTSSPSSSTSSSFKFEFECSSSCRCLPDQCQLRPTQASARLPLSLGYLPKKGWGVFFSPPPSCPPARPPSLPPHTFVAEYTGELISTVEARRRLAIYDEVSALSSLPSSLPSSLPPSPGIGKRPSPPAGCTHAAEHVKHAQGHAQANAAPAEVPILGPCPSQEGDKEERRGGQVHAGPRPHYLLTLLEEGDDFYLRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQPGL
Sbjct: 1 MHTPLPCVPPPPSSGLPPLPLLPSTFRWVDSVVLPSGTHNRRLHRRGGRAGSAGKGQTQGAEAAEGCGCDGESRNSAALSSPSSFPLVCCHDASCPCYRTAHRIALGDAPLPGEHSGSNAGKASIESIPSPSTRPKSDQDQSKGDSTTATDTHTIDDEKGSNNIDATPDNNDVVRHRMPSNSSNPVAGQDADRPLSPTSSPSSSTSSSFKFEFECSSSCRCLPDQCQLRPTQASARLPLSLGYLPKKGWGVFFSPPPSCPPARPPSLPPHTFVAEYTGELISTVEARRRLAIYDEVSALSSLPSSLPSSLPPSPGIGKRPSPPAGCTHAAEHVKHAQGHAQANAAPAEVPILGPCPSQEGDKEERRGGQVHAGPRPHYLLTLLEEGDDFYLRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQPGL 504
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|470413560|ref|XP_004336591.1| (SET domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440793393|gb|ELR14578.1| SET domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 90.5077 bits (223), Expect = 6.123e-17 Identity = 51/112 (45.54%), Postives = 61/112 (54.46%), Query Frame = 0
Query: 391 LRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQP 502
LRT++D TR GNVSRFFNHSCDPNM + VR G L+PRL FF R V AG+ELT+ YG H S T + + R C CG+ C G LP+ P
Sbjct: 159 LRTNIDGTRLGNVSRFFNHSCDPNMLLFLVRVGSLIPRLAFFVCRDVAAGEELTYDYG-----HGS-------------------TQAADAPATRQCHCGARHCRGVLPFDP 246
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|695051687|ref|XP_009413878.1| (PREDICTED: histone-lysine N-methyltransferase SUVR3 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 88.1965 bits (217), Expect = 1.800e-15 Identity = 54/150 (36.00%), Postives = 76/150 (50.67%), Query Frame = 0
Query: 357 SQEGDKEERRGGQVHAGPRPHYLLTLLEE---GDDFYLRTSLDATRCGNVSRFFNHSCDP-NMHVVCVRNGG-LLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQ 501
++E + +R ++ G R H L ++ E LR ++DAT+ GN++RF NHSCD N+ V VRN G LLPRLCFF + V G+ELTF+YG + ++ G PC+CGS CVG LP +
Sbjct: 222 TEEARRRQRTYDELACGGRLHPALLVVREHLPSGKACLRVNIDATKVGNIARFVNHSCDGGNLSTVLVRNSGSLLPRLCFFAAKDVVDGEELTFSYG----------------------------VADLTKQGLPCFCGSSCCVGRLPSE 343
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|939280165|ref|XP_014260680.1| (PREDICTED: probable histone-lysine N-methyltransferase set-23 [Cimex lectularius]) HSP 1 Score: 85.1149 bits (209), Expect = 8.347e-15 Identity = 46/130 (35.38%), Postives = 65/130 (50.00%), Query Frame = 0
Query: 375 RPHYLLTLLEEGDDFYLRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQPGL 504
+ +Y+LTL E +D + T +DA GN+ R+ NHSCDPN +V VR G +PR+C F +R + G+ELT+ Y + EN +S C+C S+KC G LP GL
Sbjct: 168 KNNYILTLREHCEDCIIDTCVDARLFGNIGRYLNHSCDPNCILVPVRTGNTIPRICIFAKRNIRKGEELTYHYNSQSENLSST----------------------------RCYCRSKKCAGFLPSSSGL 269
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|908407843|ref|XP_013062772.1| (PREDICTED: histone-lysine N-methyltransferase SETMAR-like [Biomphalaria glabrata]) HSP 1 Score: 83.5741 bits (205), Expect = 3.311e-14 Identity = 51/158 (32.28%), Postives = 79/158 (50.00%), Query Frame = 0
Query: 360 GDKEERRGGQVHAGPRPHYLLTLLEEGDDFYLRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGT-ILP------------QSQSGRPCWCGSEKCVGNLPYQPGL 504
G++ + R + + +YL+ + E + L T +D + GN+ RF NHSCDPN+ +V VRN +PRL F + + AG+ELTF N++ V + S +SC + T +LP + +PC+CGS C G +PY L
Sbjct: 152 GEEAKHRMAATESSNKDNYLIVVREYWKEQVLLTYVDPQKVGNIGRFINHSCDPNLVMVPVRNNHSVPRLALFASKDIIAGEELTF-------NYSGVSRVSLPS-----KSCIESTKVLPHLFEITDSKVDIRQVKRKPCYCGSNLCKGFMPYDKDL 297
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|551601783|ref|XP_005782508.1| (histone-lysine N-methyltransferase, partial [Emiliania huxleyi CCMP1516] >gi|485635397|gb|EOD30079.1| histone-lysine N-methyltransferase, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 79.337 bits (194), Expect = 4.320e-14 Identity = 46/127 (36.22%), Postives = 59/127 (46.46%), Query Frame = 0
Query: 376 PHYLLTLLEEGDDFYLRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQP 502
P+Y + L E LRT +D GNV RF NHSC+PN+ VR G L+PRL F +R + AG+ELT YG+ E RPC CG+ C G LP++P
Sbjct: 20 PNYAICLREHSAARVLRTWIDPAARGNVGRFVNHSCEPNLSAHAVRAGSLVPRLALFARRDIAAGEELTMTYGDGAEAAGGGESAA------------------LGAGRRPCLCGAATCGGWLPFEP 128
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|260809996|ref|XP_002599790.1| (hypothetical protein BRAFLDRAFT_70261 [Branchiostoma floridae] >gi|229285072|gb|EEN55802.1| hypothetical protein BRAFLDRAFT_70261 [Branchiostoma floridae]) HSP 1 Score: 82.4185 bits (202), Expect = 5.323e-14 Identity = 47/146 (32.19%), Postives = 72/146 (49.32%), Query Frame = 0
Query: 360 GDKEERRGGQVHAGPRPHYLLTLLEE-GDDFYLRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQPGL 504
G +E ++ Q +Y+LTL E + T +D T GNV R+ NHSC PN+ ++ VR +P+L F + + G+EL+F Y N ++G ++ +G S +PC+CGSE C G LP+ P L
Sbjct: 131 GLEEAKKRTQNMKKEDMNYILTLREHVASGNIIETHIDPTYIGNVGRYINHSCSPNLLMLPVRVDSEVPKLALFAGKDIEVGEELSFDYSGEYGNVVNQGNLQKVTGQS-----------KDSSKLKPCFCGSEMCTGFLPFDPSL 265
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|1096023671|ref|XP_018779423.1| (PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETMAR [Serinus canaria]) HSP 1 Score: 82.8037 bits (203), Expect = 5.601e-14 Identity = 47/146 (32.19%), Postives = 70/146 (47.95%), Query Frame = 0
Query: 360 GDKEERRGGQVHAGPRPHYLLTLLEE-GDDFYLRTSLDATRCGNVSRFFNHSCDPNMHVVCVRNGGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLPYQPGL 504
G E +R Q + P+Y++ + E D L T +D R GNV RF NHSC+PN+ +V VR ++P+L F + AG+ELT+ Y R +N S + ++ +PC+CGS C LP+ L
Sbjct: 148 GSAEAQRRAQAQSPQEPNYIIAVREHLHDGRVLETFVDPARIGNVGRFLNHSCEPNLFMVPVRVDSMVPKLALFAATDISAGEELTYDYSGRFQNFPET-------------SREHKALEEENSLRKPCYCGSRTCASFLPWDSSL 280
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|566199711|ref|XP_002319719.2| (SET domain-containing family protein [Populus trichocarpa] >gi|550325075|gb|EEE95642.2| SET domain-containing family protein [Populus trichocarpa]) HSP 1 Score: 83.5741 bits (205), Expect = 7.774e-14 Identity = 49/111 (44.14%), Postives = 60/111 (54.05%), Query Frame = 0
Query: 391 LRTSLDATRCGNVSRFFNHSCDP-NMHVVCVRN-GGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLP 499
LR ++DATR GNV+RF NHSCD N+ V VR+ G LLPRLCFF R + G+ELTF+YGE ++V S G C+CGS C G LP
Sbjct: 277 LRINIDATRTGNVARFINHSCDGGNLTTVLVRHTGSLLPRLCFFASRNIKEGEELTFSYGE----------IRVRS------------------KGLQCFCGSSCCFGTLP 359
BLAST of EWM21053.1 vs. NCBI_GenBank
Match: gi|743873050|ref|XP_011034294.1| (PREDICTED: histone-lysine N-methyltransferase SUVR3 [Populus euphratica]) HSP 1 Score: 83.5741 bits (205), Expect = 8.290e-14 Identity = 49/111 (44.14%), Postives = 60/111 (54.05%), Query Frame = 0
Query: 391 LRTSLDATRCGNVSRFFNHSCDP-NMHVVCVRN-GGLLPRLCFFTQRRVHAGDELTFAYGEREENHASKGGVKVESGARCGRSCAKGTILPQSQSGRPCWCGSEKCVGNLP 499
LR ++DATR GNV+RF NHSCD N+ V VR+ G LLPRLCFF R + G+ELTF+YGE ++V S G C+CGS C G LP
Sbjct: 276 LRINIDATRTGNVARFINHSCDGGNLTTVLVRHTGSLLPRLCFFASRNIKEGEELTFSYGE----------IRVRS------------------KGLQCFCGSSCCFGTLP 358 The following BLAST results are available for this feature:
BLAST of EWM21053.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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