EWM21049.1, cds9622 (CDS) Nannochloropsis gaditana

Overview
NameEWM21049.1
Unique Namecds9622
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:69608..69638 +
Alignment locationKK037255.1:69807..70024 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21049.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100221g8.4573.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:69608..69638 +
KK037255.1supercontigKK037255.1:69807..70024 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21049.1 vs. NCBI_GenBank
Match: gi|585101066|gb|EWM21049.1| (hypothetical protein Naga_100221g8 [Nannochloropsis gaditana])

HSP 1 Score: 176.022 bits (445), Expect = 4.563e-56
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 
Query:    1 MSTGRTLSKRGFGEACTRHGLRDHYDLFQDSMRAQCYAFMVSPLFYGNGGVTQIIKRRQAPVRHCQHAHQRRNMTWMPSSWI 82
            MSTGRTLSKRGFGEACTRHGLRDHYDLFQDSMRAQCYAFMVSPLFYGNGGVTQIIKRRQAPVRHCQHAHQRRNMTWMPSSWI
Sbjct:    1 MSTGRTLSKRGFGEACTRHGLRDHYDLFQDSMRAQCYAFMVSPLFYGNGGVTQIIKRRQAPVRHCQHAHQRRNMTWMPSSWI 82
The following BLAST results are available for this feature:
BLAST of EWM21049.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101066|gb|EWM21049.1|4.563e-56100.00hypothetical protein Naga_100221g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9653rna9653Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications