EWM21057.1, cds9615 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|585101080|gb|EWM21057.1| (gmp synthase [Nannochloropsis gaditana]) HSP 1 Score: 288.5 bits (737), Expect = 1.135e-98 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query: 1 MLASPSFIQASIATVLSYSTSYKRSDATSPGRSCLFALASRTSPVLSISPPSSFLAPLCFRFPARLPSSARMDGQLHVDRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVYAVSRGCA 144
MLASPSFIQASIATVLSYSTSYKRSDATSPGRSCLFALASRTSPVLSISPPSSFLAPLCFRFPARLPSSARMDGQLHVDRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVYAVSRGCA
Sbjct: 1 MLASPSFIQASIATVLSYSTSYKRSDATSPGRSCLFALASRTSPVLSISPPSSFLAPLCFRFPARLPSSARMDGQLHVDRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVYAVSRGCA 144
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|673043401|ref|XP_008875661.1| (GMP synthase (glutamine-hydrolyzing) domain-containing protein [Aphanomyces invadans] >gi|574468450|gb|ETV95468.1| GMP synthase (glutamine-hydrolyzing) domain-containing protein [Aphanomyces invadans]) HSP 1 Score: 112.849 bits (281), Expect = 2.020e-26 Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 0
Query: 79 DRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
+RPQIAILDFGSQYSHLIARRVRELHVFCELYSCLV E L K+Q+ GIILSGGPNSVY
Sbjct: 7 NRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVTAEELSKHQLTGIILSGGPNSVY 65
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|669139898|ref|XP_008605517.1| (GMP synthase (glutamine-hydrolysing) [Saprolegnia diclina VS20] >gi|530742431|gb|EQC40673.1| GMP synthase (glutamine-hydrolysing) [Saprolegnia diclina VS20]) HSP 1 Score: 112.079 bits (279), Expect = 4.066e-26 Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 0
Query: 79 DRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
+RPQ+AILDFGSQYSHLIARRVRELHVFCELYSCLV E LRK+++ GIILSGGPNSVY
Sbjct: 9 NRPQVAILDFGSQYSHLIARRVRELHVFCELYSCLVTVEELRKHELTGIILSGGPNSVY 67
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|698792476|ref|XP_009829270.1| (GMP synthase (glutamine-hydrolyzing) domain-containing protein [Aphanomyces astaci] >gi|574115927|gb|ETV81412.1| GMP synthase (glutamine-hydrolyzing) domain-containing protein [Aphanomyces astaci]) HSP 1 Score: 111.309 bits (277), Expect = 7.856e-26 Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 0
Query: 79 DRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
+RPQIAILDFGSQYSHLIARRVRELHVFCELYSCLV E L K+Q+ GIILSGGPNSVY
Sbjct: 7 NRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVTVEELSKHQLTGIILSGGPNSVY 65
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|1173947644|gb|OQR95870.1| (GMP synthase, glutamine-hydrolyzing [Thraustotheca clavata]) HSP 1 Score: 109.383 bits (272), Expect = 3.586e-25 Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 0
Query: 79 DRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
+RPQ+AILDFGSQYSHLIARRVRELHVFCELYSCLV E L K+++ GIILSGGPNSVY
Sbjct: 10 NRPQVAILDFGSQYSHLIARRVRELHVFCELYSCLVTVEELSKHELTGIILSGGPNSVY 68
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|325182303|emb|CCA16757.1| (unnamed protein product [Albugo laibachii Nc14]) HSP 1 Score: 108.997 bits (271), Expect = 5.383e-25 Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0
Query: 75 QLHVDRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
QL DR QIAILDFGSQYSHLIARRVRELHVFCELYSCLV+ + LR++++ GIILSGGPNSV+
Sbjct: 3 QLVADRSQIAILDFGSQYSHLIARRVRELHVFCELYSCLVEAKELRQHRLNGIILSGGPNSVF 65
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|1173932973|gb|OQR84855.1| (GMP synthase [Achlya hypogyna]) HSP 1 Score: 108.612 bits (270), Expect = 7.603e-25 Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0
Query: 79 DRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
+RPQ+AILDFGSQYSHLIARRVRELHVFCELYSCLV E L K+ + GIILSGGPNSVY
Sbjct: 9 NRPQVAILDFGSQYSHLIARRVRELHVFCELYSCLVTVEELSKHDLTGIILSGGPNSVY 67
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|635362851|emb|CCI48502.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 107.071 bits (266), Expect = 2.592e-24 Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0
Query: 75 QLHVDRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
Q DR QIAILDFGSQYSHLIARRVRELHVFCELYSCLV + LR++++ GIILSGGPNSV+
Sbjct: 3 QFVTDRSQIAILDFGSQYSHLIARRVRELHVFCELYSCLVDAKELRQHRLNGIILSGGPNSVF 65
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|223999079|ref|XP_002289212.1| (GMP synthase [Thalassiosira pseudonana CCMP1335] >gi|220974420|gb|EED92749.1| GMP synthase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 106.301 bits (264), Expect = 4.771e-24 Identity = 46/61 (75.41%), Postives = 55/61 (90.16%), Query Frame = 0
Query: 77 HVDRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
+++RPQ+AILDFGSQYSHLIARRVRELHV+CELYSCLV E L K+++ +ILSGGPNSVY
Sbjct: 16 NINRPQVAILDFGSQYSHLIARRVRELHVYCELYSCLVSPEELGKHELTAVILSGGPNSVY 76
BLAST of EWM21057.1 vs. NCBI_GenBank
Match: gi|695403619|ref|XP_009523327.1| (hypothetical protein PHYSODRAFT_345503 [Phytophthora sojae] >gi|348680794|gb|EGZ20610.1| hypothetical protein PHYSODRAFT_345503 [Phytophthora sojae]) HSP 1 Score: 106.301 bits (264), Expect = 5.311e-24 Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0
Query: 79 DRPQIAILDFGSQYSHLIARRVRELHVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVY 137
+R Q+AILDFGSQYSHLIARRVRELHVFCELYSCLV E LR++Q+ GIILSGGP SV+
Sbjct: 9 NRKQVAILDFGSQYSHLIARRVRELHVFCELYSCLVSAEELRQHQLTGIILSGGPQSVF 67 The following BLAST results are available for this feature:
BLAST of EWM21057.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|