EWM21064.1, cds9609 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21064.1 vs. NCBI_GenBank
Match: gi|585101092|gb|EWM21064.1| (hypothetical protein Naga_102637g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 257.684 bits (657), Expect = 8.213e-87 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 VHYPPLPPFLPPSLPQVLAACLGMCGIILEVTARFDPSTDAVQVTRGRRPLHDLLPPRSVPINASFNPLRDLIEVEGFHGGALSYAPYNSAPEIGVKLEASRIEEYQAKVLPSLPPSLPPSLPRVAPPTLPL 132
VHYPPLPPFLPPSLPQVLAACLGMCGIILEVTARFDPSTDAVQVTRGRRPLHDLLPPRSVPINASFNPLRDLIEVEGFHGGALSYAPYNSAPEIGVKLEASRIEEYQAKVLPSLPPSLPPSLPRVAPPTLPL
Sbjct: 1 VHYPPLPPFLPPSLPQVLAACLGMCGIILEVTARFDPSTDAVQVTRGRRPLHDLLPPRSVPINASFNPLRDLIEVEGFHGGALSYAPYNSAPEIGVKLEASRIEEYQAKVLPSLPPSLPPSLPRVAPPTLPL 132
BLAST of EWM21064.1 vs. NCBI_GenBank
Match: gi|585103699|gb|EWM22966.1| (fad linked oxidase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 104.375 bits (259), Expect = 1.837e-23 Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0
Query: 16 QVLAACLGMCGIILEVTARFDPSTDAVQVTRGRRPLHDLLPPRSVPINASFNPLRDLIEVEGFHGGALSYAPYNSAPEIGVKLEASRIEEYQ 107
+V+AACLGMCGI+L+VT RF+P T A VT+ + +DL PPR VPIN S+NPL+ IE GGA++Y+PYNSA KL+ + IEEY
Sbjct: 251 RVMAACLGMCGIVLDVTVRFNPDTSATMVTQTKMQYYDLFPPRGVPINDSYNPLKHFIESHA--GGAINYSPYNSALLRSAKLDVNMIEEYH 340
BLAST of EWM21064.1 vs. NCBI_GenBank
Match: gi|553179540|ref|XP_005852716.1| (fad-linked oxidoreductase [Nannochloropsis gaditana CCMP526] >gi|422295817|gb|EKU23116.1| fad-linked oxidoreductase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 100.908 bits (250), Expect = 2.001e-22 Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0
Query: 16 QVLAACLGMCGIILEVTARFDPSTDAVQVTRGRRPLHDLLPPRSVPINASFNPLRDLIEVEGFHGGALSYAPYNSAPEIGVKLEASRIEEYQ 107
+V+AACLGMCGI+L+VT RF+P T A VT+ + +DL PPR VPIN S+NPL+ IE GGA++Y+PYNSA KL+ + IEEY
Sbjct: 120 RVMAACLGMCGIVLDVTVRFNPDTSATMVTQTKMQYYDLFPPRGVPINDSYNPLKHFIESHA--GGAINYSPYNSALLRSAKLDVNMIEEYH 209
BLAST of EWM21064.1 vs. NCBI_GenBank
Match: gi|585108367|gb|EWM26357.1| (fad-linked oxidoreductase [Nannochloropsis gaditana]) HSP 1 Score: 81.2629 bits (199), Expect = 2.300e-15 Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 17 VLAACLGMCGIILEVTARFDPSTDAVQVTRGRRPLHDLLPPRSVPINASFNPLRDLIEVEGFHGGALSYAPYNSAPEIGVKLEASRIEEYQA 108
V ACLGMCGIIL+VT RF P T V VT+ + PL D PR+ N+SFNPL+D I GGA++YA YNSA G L+ + E Y A
Sbjct: 238 VYTACLGMCGIILDVTLRFSPETTGVTVTQIKAPLKDFF-PRACETNSSFNPLKDWI--NSHVGGAMNYATYNSAILSG-PLDPKKAEIYTA 325 The following BLAST results are available for this feature:
BLAST of EWM21064.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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