EWM21091.1, cds9583 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|585101152|gb|EWM21091.1| (Protein of unknown function DUF2177, membrane [Nannochloropsis gaditana]) HSP 1 Score: 298.516 bits (763), Expect = 2.093e-102 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 Query: 1 MYQSVQSETLEWSEVAMRRKSPGWPFYPLAALLYVLVDLPWLLINSGNVQNMVEDIQKQPLEFRVWAAVPVYVALAYLVSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVLTCIVFIILTHPRISPVWAAQRQ 147 MYQSVQSETLEWSEVAMRRKSPGWPFYPLAALLYVLVDLPWLLINSGNVQNMVEDIQKQPLEFRVWAAVPVYVALAYLVSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVLTCIVFIILTHPRISPVWAAQRQ Sbjct: 1 MYQSVQSETLEWSEVAMRRKSPGWPFYPLAALLYVLVDLPWLLINSGNVQNMVEDIQKQPLEFRVWAAVPVYVALAYLVSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVLTCIVFIILTHPRISPVWAAQRQ 147
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|553191802|ref|XP_005855458.1| (membrane protein [Nannochloropsis gaditana CCMP526] >gi|422293600|gb|EKU20900.1| membrane protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 267.7 bits (683), Expect = 1.893e-90 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 Query: 17 MRRKSPGWPFYPLAALLYVLVDLPWLLINSGNVQNMVEDIQKQPLEFRVWAAVPVYVALAYLVSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVLTCIVFIILTHPRISPVWAAQRQ 147 MRRKSPGWPFYPLAALLYVLVDLPWLLINSGNVQNMVEDIQKQPLEFRVWAAVPVYVALAYLVSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVLTCIVFIILTHPRISPVWAAQRQ Sbjct: 1 MRRKSPGWPFYPLAALLYVLVDLPWLLINSGNVQNMVEDIQKQPLEFRVWAAVPVYVALAYLVSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVLTCIVFIILTHPRISPVWAAQRQ 131
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|157953132|ref|YP_001498024.1| (hypothetical protein NY2A_B828R [Paramecium bursaria Chlorella virus NY2A] >gi|155123359|gb|ABT15227.1| hypothetical protein NY2A_B828R [Paramecium bursaria Chlorella virus NY2A]) HSP 1 Score: 64.6994 bits (156), Expect = 1.144e-10 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 0 Query: 28 PLAALLYVLVDLPWLLINSGNV-QNMVEDIQKQPLEFRVWAAVPVYVALAYL----VSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVL 125 L+A+L VL DL W+ SG + M+E IQ PL+ ++ A+ YVA+ L VS ++++AF LG YA+YD+T+ + +S + + ++ D++WGG L Sbjct: 10 KLSAILLVL-DLIWINTVSGKLFTQMIETIQGSPLKIKMAGALAAYVAIIALFYMFVSETTTNFKAFLLGFLAYAIYDFTSYALISEWKFKTSILDALWGGTL 111
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|448930473|gb|AGE54038.1| (putative membrane protein (DUF2177) [Paramecium bursaria Chlorella virus IL-3A]) HSP 1 Score: 63.5438 bits (153), Expect = 3.152e-10 Identity = 37/103 (35.92%), Postives = 63/103 (61.17%), Query Frame = 0 Query: 28 PLAALLYVLVDLPWLLINSGNV-QNMVEDIQKQPLEFRVWAAVPVYVALAYL----VSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVL 125 L+A+L VL DL W+ SG + M+E IQ PL+ ++ A+ YVA+ L VS ++++AF LG YA+YD+T+ + + + + ++ D++WGG+L Sbjct: 10 KLSAILLVL-DLIWINTVSGKLFTQMIETIQGSPLKIKMAGALAAYVAIIALFYMFVSETTTNFKAFLLGFLAYAIYDFTSYALIDKWDFKTSILDALWGGIL 111
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|448931164|gb|AGE54727.1| (putative membrane protein (DUF2177) [Paramecium bursaria Chlorella virus KS1B]) HSP 1 Score: 62.7734 bits (151), Expect = 7.318e-10 Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 28 PLAALLYVLVDLPWLLINSGNV-QNMVEDIQKQPLEFRVWAAVPVYVALAYL----VSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVL 125 L+A+L VL DL W+ SG + M+E IQ PL+ ++ A+ YVA+ L VS ++++AF LG YA+YD+T+ + + + + ++ D++WGG L Sbjct: 10 KLSAILLVL-DLIWIRAVSGKLFTQMIETIQGSPLKIKMAGALAAYVAIIALFYMFVSETTTNFKAFLLGFLAYAIYDFTSYALIDKWDFKTSILDALWGGTL 111
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|508182178|ref|YP_008052697.1| (hypothetical protein PGCG_00386 [Phaeocystis globosa virus] >gi|357292366|gb|AET73702.1| hypothetical protein PGBG_00391 [Phaeocystis globosa virus 14T] >gi|506459023|gb|AGM15690.1| hypothetical protein PGCG_00386 [Phaeocystis globosa virus]) HSP 1 Score: 62.3882 bits (150), Expect = 8.172e-10 Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = 0 Query: 27 YPLAALLYVLVDLPWLLINSGNVQNMVEDIQKQPLEFRVWAAVPVYV----ALAYLVSRANSSW-EAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVLTCI 128 + L +++++VD +L + S N + MV+ IQ PL +++ + Y+ +L Y V N+S+ +AF LG Y VY+ TNM+ + L D WGG L I Sbjct: 5 FLLLGIIFIIVDTAFLYLMSNNFKTMVKKIQGTPLSMKIFPTIFAYLILISSLYYFVVYKNASFLDAFLLGFFIYGVYETTNMAIFKDWNLYVGLIDLTWGGFLFLI 111
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|9632155|ref|NP_048980.1| (hypothetical protein [Paramecium bursaria Chlorella virus 1] >gi|2447097|gb|AAC96955.1| hypothetical protein [Paramecium bursaria Chlorella virus 1] >gi|448925046|gb|AGE48627.1| putative membrane protein (DUF2177) [Paramecium bursaria Chlorella virus AN69C] >gi|448933914|gb|AGE57469.1| putative membrane protein (DUF2177) [Paramecium bursaria Chlorella virus NE-JV-4]) HSP 1 Score: 62.3882 bits (150), Expect = 9.251e-10 Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 28 PLAALLYVLVDLPWLLINSGNV-QNMVEDIQKQPLEFRVWAAVPVYVALAYL----VSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVL 125 L+A+L VL DL W+ SG + M+E IQ PL+ ++ A+ YVA+ L VS ++++AF LG YA+YD+T+ + + + + ++ D++WGG L Sbjct: 10 KLSAILLVL-DLIWINTVSGKLFTQMIETIQGSPLKIKMAGALAAYVAIIALFYMFVSETTTNFKAFLLGFLAYAIYDFTSYALIDKWDFKTSILDALWGGTL 111
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|157953934|ref|YP_001498825.1| (hypothetical protein AR158_C744R [Paramecium bursaria Chlorella virus AR158] >gi|156068582|gb|ABU44289.1| hypothetical protein AR158_C744R [Paramecium bursaria Chlorella virus AR158] >gi|448931535|gb|AGE55097.1| putative membrane protein (DUF2177) [Paramecium bursaria Chlorella virus MA-1D] >gi|448935363|gb|AGE58914.1| putative membrane protein (DUF2177) [Paramecium bursaria Chlorella virus NYs1]) HSP 1 Score: 62.3882 bits (150), Expect = 9.552e-10 Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 28 PLAALLYVLVDLPWLLINSGNV-QNMVEDIQKQPLEFRVWAAVPVYVALAYL----VSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVL 125 L+A+L VL DL W+ SG + M+E IQ PL+ ++ A+ YVA+ L VS ++++AF LG YA+YD+T+ + + + + ++ D++WGG L Sbjct: 10 KLSAILLVL-DLIWINTVSGKLFTQMIETIQGTPLKIKMAGALAAYVAIIALFYMFVSETTTNFKAFLLGFLAYAIYDFTSYALIDKWDFKTSILDALWGGTL 111
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|448934982|gb|AGE58534.1| (putative membrane protein (DUF2177) [Paramecium bursaria Chlorella virus NY-2B]) HSP 1 Score: 62.003 bits (149), Expect = 1.247e-9 Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 28 PLAALLYVLVDLPWLLINSGNV-QNMVEDIQKQPLEFRVWAAVPVYVALAYL----VSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVL 125 L+A+L VL DL W+ SG + M+E IQ PL+ ++ A+ YVA+ L VS ++++AF LG YA+YD+T+ + + + + ++ D++WGG L Sbjct: 10 KLSAILLVL-DLIWINTVSGKLFTQMIETIQGAPLKIKMAGALAAYVAIIALFYMFVSETTTNFKAFLLGFLAYAIYDFTSYALIDKWDFKTSILDALWGGTL 111
BLAST of EWM21091.1 vs. NCBI_GenBank
Match: gi|448930851|gb|AGE54415.1| (putative membrane protein (DUF2177) [Paramecium bursaria Chlorella virus IL-5-2s1]) HSP 1 Score: 61.2326 bits (147), Expect = 2.100e-9 Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 28 PLAALLYVLVDLPWLLINSGNV-QNMVEDIQKQPLEFRVWAAVPVYVALAYL----VSRANSSWEAFGLGVACYAVYDWTNMSTLSSYWWGFALADSVWGGVL 125 L+A+L VL DL W+ SG + M+E IQ PL+ ++ A+ YVA+ L VS ++++AF LG YA+YD+T+ + + + + ++ D++WGG L Sbjct: 10 KLSAILLVL-DLIWINTVSGKLFTQMIEAIQGAPLKIKMAGALAAYVAIIALFYMFVSETTTNFKAFLLGFLAYAIYDFTSYALIDKWDFKTSILDALWGGTL 111 The following BLAST results are available for this feature:
BLAST of EWM21091.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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