EWM21094.1, cds9580 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21094.1 vs. NCBI_GenBank
Match: gi|585101156|gb|EWM21094.1| (hypothetical protein Naga_100776g2 [Nannochloropsis gaditana]) HSP 1 Score: 962.214 bits (2486), Expect = 0.000e+0 Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0 Query: 1 MARISRCSGAGVSGRRGLRINDSPFPFSFSLLKSTLRVEEAITIEGRHESLADFLVHHPAEEVTSYFTEIVAMLEHRGIAAGKACERRFFFPSHSPPPPRLENYHLVLKHAEDTSMRENEKEYHLSERRRAESKREAGQRGVRRRREGSLGSGGMREDGRGEDYRRRVYRPSGASPRSDGSVERGSEGKERRNPMREGRDRRWREEGMESSRGEEVQVRGRRQRRDGRDSRSRSRNRAKTWQLREGGRERGGRGGTGRGRSQRRRCGRSSSRSRSRSLSPECRSCAHSLSPPSPAPCPFPAATPTGPPKKASWAIVVYHGGSARKDFSGPLAASSCMSCDLGTSMQMGLTGSGSGGLPAKASLIYEDEHMRYWHDAKGRPLFVVTPLRHVHNLKELTGAEMHRLWSGAMQILTDMGCDPKQDMRDMILNAGVDRNHAHLHLKVRVTGSGFDRARAKWSERRNRLVDALRTFARKQSC 477 MARISRCSGAGVSGRRGLRINDSPFPFSFSLLKSTLRVEEAITIEGRHESLADFLVHHPAEEVTSYFTEIVAMLEHRGIAAGKACERRFFFPSHSPPPPRLENYHLVLKHAEDTSMRENEKEYHLSERRRAESKREAGQRGVRRRREGSLGSGGMREDGRGEDYRRRVYRPSGASPRSDGSVERGSEGKERRNPMREGRDRRWREEGMESSRGEEVQVRGRRQRRDGRDSRSRSRNRAKTWQLREGGRERGGRGGTGRGRSQRRRCGRSSSRSRSRSLSPECRSCAHSLSPPSPAPCPFPAATPTGPPKKASWAIVVYHGGSARKDFSGPLAASSCMSCDLGTSMQMGLTGSGSGGLPAKASLIYEDEHMRYWHDAKGRPLFVVTPLRHVHNLKELTGAEMHRLWSGAMQILTDMGCDPKQDMRDMILNAGVDRNHAHLHLKVRVTGSGFDRARAKWSERRNRLVDALRTFARKQSC Sbjct: 1 MARISRCSGAGVSGRRGLRINDSPFPFSFSLLKSTLRVEEAITIEGRHESLADFLVHHPAEEVTSYFTEIVAMLEHRGIAAGKACERRFFFPSHSPPPPRLENYHLVLKHAEDTSMRENEKEYHLSERRRAESKREAGQRGVRRRREGSLGSGGMREDGRGEDYRRRVYRPSGASPRSDGSVERGSEGKERRNPMREGRDRRWREEGMESSRGEEVQVRGRRQRRDGRDSRSRSRNRAKTWQLREGGRERGGRGGTGRGRSQRRRCGRSSSRSRSRSLSPECRSCAHSLSPPSPAPCPFPAATPTGPPKKASWAIVVYHGGSARKDFSGPLAASSCMSCDLGTSMQMGLTGSGSGGLPAKASLIYEDEHMRYWHDAKGRPLFVVTPLRHVHNLKELTGAEMHRLWSGAMQILTDMGCDPKQDMRDMILNAGVDRNHAHLHLKVRVTGSGFDRARAKWSERRNRLVDALRTFARKQSC 477
BLAST of EWM21094.1 vs. NCBI_GenBank
Match: gi|188501661|gb|ACD54779.1| (diadenosine tetraphosphate hydrolase HIT family-like protein [Adineta vaga]) HSP 1 Score: 75.8702 bits (185), Expect = 7.939e-12 Identity = 41/153 (26.80%), Postives = 76/153 (49.67%), Query Frame = 0 Query: 317 VYHGGSARKDFSGPLAASSCMSCDLGTSMQMGLTGSGSGGLPAKASLIYEDEHMRYWHDAKGRPLFVVTPLRHVHNLKELTGAEMHRLWSGAMQILTDMGCDPKQDMRDMILNAGVDRNHAHLHLKVRVTGSGFDR-ARAKWSERRNRLVDAL 468 +Y+ R SGP+ C+SCD+ + ++ S I ++ W DA+ R +VTP RH+ L ++T EM W IL ++G + + MI+N G+ RNH HLH+K+ + + +++ + ++ ++ ++ D L Sbjct: 97 IYNDKEIR---SGPVNGGVCISCDMDNKL-------------SQLSSIQQNSTTSIWLDAQLRKKLIVTPKRHIERLSDMTDEEMILFWKDTQLILNEVGV----NWQSMIINHGLYRNHFHLHMKINIEQNQWNQFIQNRYKDKIEQMNDLL 229
BLAST of EWM21094.1 vs. NCBI_GenBank
Match: gi|294461665|gb|ADE76392.1| (unknown [Picea sitchensis]) HSP 1 Score: 74.3294 bits (181), Expect = 3.034e-11 Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 0 Query: 375 DAKGRPLFVVTPLRHVHNLKELTGAEMHRLWSGAMQILTDMGCDPKQDMRDMILNAGVDRNHAHLHLKVRVTGSGFDRARAKWSERRNRLVDALRTFARK 474 DAK RP F+VTPLRHV + EL EM+ LW +Q L + G + MILN G RN AHLHLK+ V AR WSE + L L A + Sbjct: 165 DAKARPGFIVTPLRHVDRMSELDDEEMYYLWWVGVQALRNEGFSM---FKSMILNHGCYRNVAHLHLKIWVDPQLHSAAREMWSEAKIMLWGRLEYLANR 261 The following BLAST results are available for this feature:
BLAST of EWM21094.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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